Sample 3300031070

Basic Information
IMG/M Taxon OID	3300031070 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0134331 \| Gp0333254 \| Ga0315838
Sample Name	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T17 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	29145564
Sequencing Scaffolds	38
Novel Protein Genes	50
Associated Families	40

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	3
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 88	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	8
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	3
All Organisms → cellular organisms → Eukaryota	5
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Tremellomycetes → Tremellales → Rhynchogastremataceae → Papiliotrema → Papiliotrema flavescens	1
Not Available	10
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Castanea → Castanea mollissima	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	1
All Organisms → Viruses → Riboviria	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → unclassified Narnaviridae → Diplodia seriata splipalmivirus 1	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida	1

Ecosystem Assignment (GOLD)
Name	Plant Litter Microbial Communities From East Loma Ridge, Irvine, California
Type	Environmental
Taxonomy	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter → Plant Litter Microbial Communities From East Loma Ridge, Irvine, California

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	grassland biome → litter layer → plant litter
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: California
Coordinates	Lat. (^o)	33.7417	Long. (^o)	-117.7042	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F006377	Metagenome / Metatranscriptome	374	Y
F008406	Metatranscriptome	333	N
F009606	Metagenome / Metatranscriptome	315	Y
F013054	Metagenome / Metatranscriptome	274	Y
F014470	Metatranscriptome	262	Y
F015954	Metagenome / Metatranscriptome	250	Y
F018668	Metagenome / Metatranscriptome	233	Y
F022330	Metagenome / Metatranscriptome	214	Y
F023769	Metagenome / Metatranscriptome	208	Y
F025888	Metagenome / Metatranscriptome	199	N
F028052	Metatranscriptome	192	N
F028371	Metagenome / Metatranscriptome	191	Y
F030309	Metagenome / Metatranscriptome	185	N
F030315	Metagenome / Metatranscriptome	185	Y
F030953	Metatranscriptome	183	N
F032498	Metagenome / Metatranscriptome	179	Y
F037504	Metagenome / Metatranscriptome	167	N
F038019	Metagenome / Metatranscriptome	166	Y
F040414	Metagenome / Metatranscriptome	161	Y
F041531	Metatranscriptome	159	Y
F042666	Metatranscriptome	157	N
F043722	Metagenome / Metatranscriptome	155	N
F044246	Metagenome / Metatranscriptome	154	N
F049431	Metagenome / Metatranscriptome	146	N
F050069	Metagenome / Metatranscriptome	145	Y
F052301	Metagenome / Metatranscriptome	142	N
F063215	Metatranscriptome	129	N
F068314	Metagenome / Metatranscriptome	124	N
F070702	Metatranscriptome	122	N
F075487	Metatranscriptome	118	N
F075502	Metatranscriptome	118	N
F078016	Metatranscriptome	116	N
F078027	Metagenome / Metatranscriptome	116	Y
F080697	Metagenome / Metatranscriptome	114	Y
F089635	Metagenome / Metatranscriptome	108	Y
F094696	Metagenome / Metatranscriptome	105	N
F100157	Metagenome / Metatranscriptome	102	Y
F102267	Metatranscriptome	101	N
F104141	Metagenome / Metatranscriptome	100	Y
F104166	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0315838_102153	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	1373	Open in IMG/M
Ga0315838_102184	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	1366	Open in IMG/M
Ga0315838_102319	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	1337	Open in IMG/M
Ga0315838_104795	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 88	1013	Open in IMG/M
Ga0315838_105146	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	983	Open in IMG/M
Ga0315838_106467	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	890	Open in IMG/M
Ga0315838_106504	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	887	Open in IMG/M
Ga0315838_106507	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	887	Open in IMG/M
Ga0315838_108368	All Organisms → cellular organisms → Eukaryota	791	Open in IMG/M
Ga0315838_108473	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Tremellomycetes → Tremellales → Rhynchogastremataceae → Papiliotrema → Papiliotrema flavescens	786	Open in IMG/M
Ga0315838_108649	Not Available	779	Open in IMG/M
Ga0315838_109894	Not Available	731	Open in IMG/M
Ga0315838_110806	Not Available	699	Open in IMG/M
Ga0315838_111091	Not Available	691	Open in IMG/M
Ga0315838_111099	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	691	Open in IMG/M
Ga0315838_111250	Not Available	687	Open in IMG/M
Ga0315838_111539	Not Available	678	Open in IMG/M
Ga0315838_111704	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Castanea → Castanea mollissima	674	Open in IMG/M
Ga0315838_111843	Not Available	669	Open in IMG/M
Ga0315838_112178	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	659	Open in IMG/M
Ga0315838_112993	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	637	Open in IMG/M
Ga0315838_113150	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	634	Open in IMG/M
Ga0315838_113184	All Organisms → cellular organisms → Eukaryota	633	Open in IMG/M
Ga0315838_113540	Not Available	625	Open in IMG/M
Ga0315838_114026	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	615	Open in IMG/M
Ga0315838_114428	Not Available	606	Open in IMG/M
Ga0315838_114925	All Organisms → cellular organisms → Eukaryota	596	Open in IMG/M
Ga0315838_115969	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	577	Open in IMG/M
Ga0315838_116686	All Organisms → Viruses → Riboviria	564	Open in IMG/M
Ga0315838_116713	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	563	Open in IMG/M
Ga0315838_117405	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	552	Open in IMG/M
Ga0315838_118564	Not Available	534	Open in IMG/M
Ga0315838_119077	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → unclassified Narnaviridae → Diplodia seriata splipalmivirus 1	527	Open in IMG/M
Ga0315838_120059	All Organisms → cellular organisms → Eukaryota	514	Open in IMG/M
Ga0315838_120068	All Organisms → cellular organisms → Eukaryota → Opisthokonta	514	Open in IMG/M
Ga0315838_120540	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida	508	Open in IMG/M
Ga0315838_120701	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	506	Open in IMG/M
Ga0315838_120762	All Organisms → cellular organisms → Eukaryota	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0315838_102153	Ga0315838_1021531	F015954	CQTSVDLVSATDNLSLEVTEAILGTLLRKSRNIPGAVRLRAHQSLRPLIDCGGEEREVSHGQMMGSYLSFPLLCLHSYLAARWALAGREGTILVNGDDTLVSSNVYLEASSYPSGYKLNDLKTIRSETVAEINSTAFLRNSKGKWREIRHLRRGGFLSDYHGMLHGAAAVRGSVEWTNAFVRSRIGKKWGFLPSQLGLNPRSYPAHERERSMSNRIFTCLPGPPTEASTSLLAVRRELDPDEKIAMFLHLWDHGREGGRKRDVFNPTVGCVRRTYAYRSVKVWSRLSYLGKLRSLKLTARREEEELRYLPADYVSKREDEILAELKRYNSVVFKDL
Ga0315838_102184	Ga0315838_1021841	F050069	ATDNLSLEVTEAILGSLLRKSRNIPGPVRLRAYQSLRPLVDCAGEGREVSHGQMMGSYLSFPLLCLHSYLAARWALRGEEGNVLVNGDDTLVSSRRYLEASDYPSGYKLNDLKTIRSETVAEINSTGFLKGKGGKWREIRNLRRGGFLADYAGMQHAAKAVSGSVAWTDAFIRSRIGKKWGFLPTQLRLNAKSYVAFERQRSMWNRNYTCLPEAPNVPSTLLLGVRRRLDPDEQVALFLHQWATGREGGRKRDVFSPSVGSIRRTYSYRAVKPWSRLTYLGKLAALKIESVNRGEEELRFLVSDYVSMREALVLRDLETFGRDLMEYE
Ga0315838_102319	Ga0315838_1023191	F050069	LMRQEWRLVGPPTEKKISSACVYPCQTSVDLVSETDNLSFVVTEALLGTLLRKSQKVPGEVCLRAFQSLRPLIDCDGEEKEVSHGQMMGSYLSFPLLSLHSYLAALWALGGREGTILVNGDDTLVSANVYLEASSYPSGYKLNDLKTIRSENVAEINSTAFLKGAKGKWREIRHLRRGGFLSDYPGMMHGASAVRGSVEWTNAFIRSRIGKKWGFLPSQLGLHPKSYPAHERERSMSNRLFTCLPVPPTQASTLLLAVRRQLDPDETIAMFLHQWEHGREGGKKRDVFEPSVGSIRRTYAYRAVKPWSRFTFLSKLASLKVTARREEESLRFLPADYVSKREDEVLKELKLYGSKCFEDL
Ga0315838_103386	Ga0315838_1033862	F041531	RLNDDKTIRAKNVVEVNSTVFLKSGGKWREVRHIRKAGAPTDFQGMIHMAKAVLISPQFVDAWHRARIGRRWGFLPSQLGHTTYPSYKRERGLRVRRFWTPLPEPSDDVLFPEELDRITGRDPTPVEAEALRVVMWKHGRWGGAKRDVFSPSCGKVRRSYRYRAQPCKSYLSFVGSGRSKLSPLCGKGGDMCLVPAGFMSDEESRGLEGLEQFRANWDRGFILLENGALDF
Ga0315838_104264	Ga0315838_1042641	F094696	MSVLNLEKLPRREGGKVLQRNAEQKDGSVVSIDLWNEISNLDNDKLEAVMKIASTEVDYELTSFIRAIEYQGFDRLFYIKTALSKMSVSIFCRFAILGAIRGSNFTRIVESCEQMPPDMVSAFTSCGFIKTPKKRDHITILRNTASIPHWCVYYMNKANIAKKLNADCPAALQFPGAASLPMSRTVRMQHIAFCQAFSSLLPGGKFRLSIYITAMSNLIPVSDIPQSVLTILSVSSNSESHRLTDEELNALGAQLVSAK
Ga0315838_104795	Ga0315838_1047951	F078016	LSVGKTMFHKSVFSLNSAYFISSKSSSPRFAPFIRSSCLFSRIEDCGEVAGRLKGCVVGTGLFREKVQTFLLRNITAGVFATQRSLRRGLGCALSSRVIRWAQLDKREDFYLSFPSEPSVPLRKRLWMHNSIPLGYVRCAGVTDDESFSFNMIETAWSRPPIAGKKQSDDEYWDYVREGTYRYVPFSAYRFWTMAGGVGALPKPQLQCRRPEKMGWKKQREGGIAFVSAGFLRG
Ga0315838_104971	Ga0315838_1049712	F030953	ISVQDYPPGYRLNADKTIRAENVAELNSTVFLKSGRKWREVRHLRRGGAVADFPGMIHMAKAVMVTPGFVDAYQRCRIGRRWGFLPSQLGHTTYPAYKRERGLRVRRAWTPLPEPSDDVEFPEELVRITGRDPTPVEAEALRVVMWTHGRWGGSKRDVFSPSCGKVRRSYRYRAQPCWSSLSFVGSGRPKLSPLREKGGEMSLVPASFISDEESRGIADLEQFRRNWDRGFMISDLEALDRDR
Ga0315838_105146	Ga0315838_1051461	F038019	VKGSRHLRAPKLALMTSGTLPIKECTAASVKPNTGSEAQTCRSCKRTAIDTRETISNGLRLIRIRYGIPYSELPDLRPTDLSRFLSFLLLQGRDRPSVKFPRRQRPSENGLMTLQRLRKHERWELAHSISSIKRSLPPGCLSCANSERSSWEANAFSIPPSSPSDYLRFVRKEVSKIFSYNWDRNYADFVWRHCPNASARMNSRRADHYFAGKGEIFRRQCLTGKSIPVDEPVRARYKAVMSAGKSRPLVIYDESVEILAPLHKTIESVLMKLPWRLVGPPTEKVISSACVYPCQTSVDLVSATDNLSLDVSEAILGTLLRKSRNIP
Ga0315838_105370	Ga0315838_1053701	F038019	AQTCRSCKRANLDTRETISNGLRLIRIRYGIPYSELPDLRPTDLSRFLSFLLLQGRQRPSVKFPRRQRPSSDGLSTLQRLRKHERWELAHSVSSLKRSLPAGCLSCANSERSSWEANAFSLPPSSPSDYLRFVRKEVSKIFPYNWDKNYADFVWRHCPNASARMNSKRADHYFAGKGRSFRRQCLTGKSILVDEPVRARYKAVMSAGKSRPLVIYDESVEILAPLHKTIESVLMKQSWRLVGPPTEKVISSACVYPCQTSVDLVSATDNLSLEVTEAILGTLLRKSRNIPGAVRLRAHQSLRPLIDCGGEEREVSHGQMMGS
Ga0315838_105504	Ga0315838_1055041	F008406	RESESLDTLSKGFDDFIAGLKGSLRFRAAMAWFSWNIGKIRPLGLTTHDLGFRGPLAYRATKKFGLRLGPSLRKIPSLKIDNGLTLTCEYVDPCLLDDDEKKENLAELAAWKWRTGFECFSSSRAAMRFHLAVSATRIDAPDFKPYLYGGESGVLSRSVGGAKVFMQRVKRIPRGFPLLIPMRGKLPTYEEVLAGEVDVGSVEPLTKEKEK
Ga0315838_106467	Ga0315838_1064671	F042666	MDLHKNAFQRSSSRVAHVTRPVDNPTSGSTVKRCFECSQSARLTKETIHNGMQLLRVRYGLPYAELPDCTPMELSRFLSFLLLQGKERTSVAFPRQQKKIKKNTTNCEEKIGLCSLQRLCRRDRWALAHGCSSIKRNLPKSCRRHTPSARKAWEANACSQPPPPSSGYLQHVRRVVTDSFCPGWDRNYKSFVGNHVPNPSSRACKGRADALWAGRRSEFITATTSEMEVTPPELTGRYKDILSAGKTRPMLIFDESVELLAPLHKLLYSHLAKQDWLLCGPPTDKKMASVLVNACQ
Ga0315838_106504	Ga0315838_1065041	F038019	LKDPVDTWLLTSITMPTSGTRFRSSCTAAPAKSISGSGAQTCRGCFRSACDTRETISHGLRLIRIRFRIPDCELPDLSPSDLNRFLSYLLLQGRERAAVVFPRKQSRHRDAHGLLPLMRMLKHERWEFAHSVASIKRSLPQGCRQHTPSARPAWEQNAFSIPPSSSFEYLRFVRTEVSRIFPYGWDRNYADFVWRHVPNPSARMSAPRADMYWCGKGVDFRRQCLTGRSVPIDRPVEARYKEVMSAGKCRPLVIYDESTEILAPLHKTLDAHLMSMPWRLVGPPTEKRISSACVY
Ga0315838_106507	Ga0315838_1065071	F032498	SVEWTNAFIRSRIGKKWGFLPSQLGLHPRSYPAYERERSMSNRFFTCLPGPPTEASTSLLAVRRELDPDEKIAMYLHQWRYGREGGRKRDVYNPTVGCVRRTYAYRAAKPWSRLSYLGKLRSLKLTARREEEELRYLPADYVSKREDEILNELRRFGSSVFEDL
Ga0315838_108368	Ga0315838_1083682	F078027	VYLERGESGLKVLSQQFSLLNNGEEGSVDFSLGLLSVGNALLFFFGFFLGGSGSEESVLTLLGSLGLYSLEEVVVDLFSFSTADINLGGGGDDSALVNSSKRNTVELIRSSDQKKSGLKLLKEDDSLSLESTDQKDQNLAWGDVLSESNRLGGLSGTLTDLLLVVSRVPLGDSGGGNLSSLNSAALNR
Ga0315838_108473	Ga0315838_1084731	F028371	VGFDESLLDSSSNSSLNVSGLLDFSSGSFSLLSLTEFNTVVSQVPLSEGGSIDLDDGALDQSVGSDQLVVGSVVNDDEDLSLSGDLFRRPGEVTGVKLEGLELVVTTSDTESSNSLFTDLGEGSRTTGFVLLFLLVDGHTTTGKSSLMSGVSRDTHDLF
Ga0315838_108649	Ga0315838_1086491	F009606	TSHQQTKFSMDSTKQQKPIENGRGPNVVRTKAKPKVNPVTGANFEFVNEPRIGDSIVVVLAGPSGVQSFTFHHPIGVTDVDGEDWVCTPTADIPSLLARRDDPDEADRKAKRDRYRLHLAVAAGLLKKADGDDQLVYPDTEINRQDALAAARAAAKDAVKAEKGKTPPDLYIRFLPQAVQEKEVAIRDKLAAKATIQAAETKFPSSGYRTRGGPLADRAQSSVEYLEGCSRSQASDAITKRIFG
Ga0315838_109894	Ga0315838_1098941	F052301	VVTVSGPGGTRSFTVHRPIGDTPLGDGAWVFTPVGEVTTLLSRMENPYEKRTEELRAKQRISWAVTKNLAKFDADGTTLLLPCGKKRAELLKEAHRAAKEAAKSKNTKPGAQDFLLHLSPQEKKEETALSDYLKSENVVRTAERAVPLPQYETCGGPLADHKQVGVKYLQNVGNSHQAVDKLIYHLAAGGDSAASAEATAGSPAAKRQASPPKESPTK
Ga0315838_110806	Ga0315838_1108061	F075487	ASQWTQSHDLPLASRVVERVRDAIMGPSTPLCEGIDGHSVPCRWTPCPHETSALLRSQASGYTNDVPVCLDDRCAWRTPLGGWLSGEQRRVSTSSTSRWWPWGASSPDDQSPSNGGFYATLGKYTVLAVGAAVAIGVGWAWARWRGDSPPSEPDLERGTESAGRSKGAQKAPLPRRGAGKSPASSRPSTPPPKRPKKNNKK
Ga0315838_111091	Ga0315838_1110911	F028052	VLYRQISKGRMDVDSFIHSASVVEKVVFLDFYGAEMNTSPMVCLDEDLYIVYHDTQAYVYTPRMFQEYMRRCRAAEVCALYPDSDVAEEPALKESPVTPPTGGFPGTDPRDGTDRTARWIHDQVTTSGNRTVSRFLGENPTKDLTCAPDGKKLAIRPTGDHRRSKSDGETQRIGLDDSLIPLRQRDVRRDFRIRPPNSSDIPPR
Ga0315838_111099	Ga0315838_1110991	F023769	MVSRPCSSRSTHVTRPVDNSASGSTVKRCYECSRASRDTKETIHNGLLLLRVRYGIPYCELPDSEPCDLSRFLSFLLLQGKERASVVFPRCQRRGEDGLCKLQRLCRRDRWALSHSISSIKRNLPSGCRRHTPSVRSSWEENVLSQPPPSSPEYLAHVRRVATQIFRPVWDRRYNDFVGRHVPNSTSRFPKKSRADHLWAGRRSEFFNACTR
Ga0315838_111250	Ga0315838_1112501	F102267	MAAQQRQETRTGGNAAGGPSPKARPALDPRVPVLVQPFKGLVENGVITELSVKFSSMGTEVKGKASQRLVDVEKSGLNTTDFFPVGRLLEVAEMGEDPVLKRPGKKGNKGAGGPAQVKPARSLCKEDFTLAPAALQQRANEIARACGGGPLVGRVRSAGRFDGTETVSYREWWDSAGAELRALSLSEGKRFNTFTPEEMGVLTGLQCPFRGTLEFTVKEED
Ga0315838_111300	Ga0315838_1113001	F075502	MSTPNEIKNRNIEAMAEVLLLAIPLLRGLDDHLDPEGTLRKLLQKIATGEPCPSGLLSNTTEMLQVFKRSLKVSARVAPGSSTGKAKRVSFGEERSYKVPLYETFVPGGVPLRSKAPTGQLLPYSESEQEFSDTEISQFLRNLAVSALSSGLSPEHLTGGK
Ga0315838_111539	Ga0315838_1115391	F068314	NAVGTSGARPRPALDPLSPALTQPFKDLVGKGIIAELSVKFTPMGVEIKGKASLKLAEVEGSGLNTTDYFPLALLSGVAEKGGLSSNPRDRKKSGGQGPAQVKPAKTLVPADLDGSLNEAALQNRINAIAKACGGGPLVGRVRSEGAFQGSETTSYRDWWDAAPAPLRALSLTEGKRRKELTPDHIGKLTNLQCPFRGTLEFEVAAGDEEEEVQTSSSKPAAPAT
Ga0315838_111704	Ga0315838_1117041	F049431	INQVTILSPSAEAPEQTPRRRPGCTGRKGRRRSEPQPQASEVCETPKPQATDSIAPTEFPKLRSATGGIRLLHRSLHRYIRPSGGEDSRQVNAQARVLDRAIPEDLVKRLAKPVIHRPQMLPANRETNRTSVPSTSTLRLPEGRQHRASRKESPSPK
Ga0315838_111843	Ga0315838_1118432	F030315	VIKYNEFIIIIKYENILLIINDVDTLKYKYRIGLDTLLVYTVKYEY
Ga0315838_112178	Ga0315838_1121781	F040414	KQDWVLCGPPTEEKMASVLVNEHQTSVDLVSATDGLDLTVTEASLDSLFFTSVKIPRTLRSFAKSSLRPLFEGLDGQEKRISHGQMMGAYLSFPLLCIHSYCAASWAARDEVGARFLVNGDDTVISAGRAISVQDYPPGYRLNADKTIRAENVAELNSTVFLRSGGKWREVRHLRRGGAVADFPGMIHMAKAVMVTPGFVDAYQRCRIGRRWGFLPSQL
Ga0315838_112993	Ga0315838_1129931	F013054	LDVSGSQSLVDVSDGFNLILEGSFFVLVKVDFLDNRAVELVSVSSSNDTSGLDNIFKERVIDGVQSSVSGSLLRSVSLDPLGVDGSLSGDENVGLESLFKFGDQLAVDSVDDTVAWVRNVDDNDILLLALADSLDFSGVRDEEILDGVLKVGDAILDFKESLSNSLFNNAGVGGDGFVELRLVVG
Ga0315838_113150	Ga0315838_1131501	F100157	SMESVPRWVQSFLGPAWNRAVRHEGFSRLYLAGTLSQTRGSGTPPPLVVLRSKRKFILSVDSPPPDVTPTQQALFEAALDDVMGEIPDHVFTGLDTKARVTVTGSACWEASRREGGTAQAILDLMAKFEEMPIPIRDLDTGKILEFLHKDNFESIGTAVFYACLDEVLHLSVEELRRVMLTVVREPSKARVVTKGVAALKIVLDTVSKICS
Ga0315838_113184	Ga0315838_1131841	F104141	SDGLTHGSLNVECSNILPSLLQKRNQEVNGHVNVLSEFFFSEVNGTDGSTHTEDLLKLESNSGLDFLDLVFDLFVFTDSDGELADLVEGVTHELGDLLHEGFRGDQDIERLGPLLDELFILVELLGTFSIDATNINLLGLVTVDGSTDETDLSVGGGDVGELDGTVETLILLGVVISETNLEFDGFSELSLLSVGQHVGNGLLKDLGGDL
Ga0315838_113540	Ga0315838_1135401	F030309	AKSKALSDAERKVLRSFFKLKEDRIPSDEWAAMDNKTRSAAMAERSIPRWASEAVLRKSSNLQLIIEGKVTKETAQQAPRDPKKISALKANGQALEAWQQLKADFKGTPLLKKPASSKEKAFKKRFDSLVSTYGQQPCFPKLRETPDQQGRSSSRGRSRSSGPGGDFLEMAKAFGEIARAFSGRSN
Ga0315838_113991	Ga0315838_1139911	F025888	VDGLEKLFRQPWDELEKQLPGCGEYLQDYLKIAVEYVMENITHVPILPIVAEEKGLKTRFPTCSLTAVNLVQQILRRVADHVMIRDPRFSEALGGDLRVDMRGEQGPWDSQDATAATDYHPEWLTRGFYEELADRYSSLAPYRRWFSKLFGPKKILTCDPTLCEPVSLLTHYPKAPLLDDKHAEMFHGVKVKKMGPGLTGLGHAE
Ga0315838_114026	Ga0315838_1140261	F014470	VRITGRDPTPVEAEALRVVMWRHGRWGGSKRDVFSPSCGKVRRSYRYRAQPCKSYLSFVGSGRPKLSSLCEKEGGMNLVPATFVSDEESRGLEGLEQFRRNWDRGFISRGDEALDF
Ga0315838_114428	Ga0315838_1144281	F022330	MYEKTHIHVLFGNLNLLDGGGGEVHLHFVVEDQDKGSTSTSEDVGKGTLEEGLTTFVLEDLGETISSTVVHDFLVTRLHHQSSSDGIKRVREKTRDSGDDLGNEELEEDGGLGVRQESSLGGIVTTEVAGSVGDDTEDRDTETLVKSLNTINSSDLVDTVDQTVELSISS
Ga0315838_114925	Ga0315838_1149251	F006377	VRRTLGGTDTRLTVGSRLVGKTEFSHVSSDHVELDFDVSVFLTGVDTDNRSDHFGKNNSVSKVSLDGDGLLTGLEVLLVLSELLNKSLVFMLETSAESSLDSGTEEFNEIFVLEGNEIFEGKTSVGEFLGGTFSSLVTHC
Ga0315838_115043	Ga0315838_1150431	F015954	PSGYKLNDLKTIRSETVVEINSTAFLKGRGGKWREIRHLRRGGFLTDYPGMLHAAKAVAWSPQWTDAFIRSRIGKKWGFLPSQLRLNPKSYACHERARSMWNRNFTCLPEPPKEVSTLLLAVRRRLDPDEQVALFLHQWATGREGGSKRDVYRPTVGCVRRTYQYRAVKPWRFLSYLGQLRALKVPAGRGEEELRYL
Ga0315838_115969	Ga0315838_1159691	F041531	RRWGFLPSQLGHTTYPAYIRERGLRVRRTWTALPEPTDVVVFPEELDRITGRDPTPVEAEALRVVMWKHGRWGGSKRDVFSPSCGKVRRSYHYRAQPCRSHLSFVGPGRPKLSPLGEKGAGYALVPSSFMSEEEMRGLADLEQFRRNWDRGFILSED
Ga0315838_116686	Ga0315838_1166861	F043722	SAFGGDATRPTRSIPKFFWKLSPYYYTWMLAIRLGLPLGAPEAYGGIGLPIAPKRSSTDHVRWLSYLSQRPKDELVIGLGLSPLGRSGQSLLDRAASGWVREVLASDVQWASEGLELLSPLALSDDAQLRLSLSEGYRKSVSRIRSVEFYFRAPPGTLEPHAPSVRMSVDRFRRKVSGAVILGSKMKY
Ga0315838_116713	Ga0315838_1167131	F063215	MVSTSSSLRPKNKDRSRGTPRRCRAFRARTSQYVRRALADWGYIFGCPAPTFQPTGECHEVAASVKKLLGNCPSDDPREVMAWQSIKKGLPPSCECMTAPLMAKLVEGFARPKRDLPAGYLRFVQQQTLRLFPKGWDLGYEEQVLLTSPPLSSTIENSRANGGCLGSGIDHDAFLNEA
Ga0315838_117405	Ga0315838_1174051	F032498	FLTDYPGMLHGAAAVRGSVDWTNAFIRSRIGKKWGFLPSQLGLHPKSYPAHERGRSMSNRLFTCLPGPPKVESTLLLAVRRRLDPDETLAMFLHQWEHGREGGKKRDVFKPTVGGVRRTYAYRSVKIWSQLSYLGKLRALKLPARREEEELRFLPADYVSKREDEILAELAFFSSECFKD
Ga0315838_117768	Ga0315838_1177681	F070702	ASWAARKESGARFLVNGDDTVISAGRAIGVQDYPPGYRLNASKTIRAENVAELNSTVFLRSGGRWREIRHLRRGGAVADYPGMMHMAKAVMTTPGFVDAFQRCRIGRRWGFLPSQLGHTTYPSYKRERGLRVRRFWTPLPGPSDDVVFPEELVRITGRDPTPVEAEALRVVMWRHGRWGGSK
Ga0315838_118471	Ga0315838_1184711	F037504	TLNNTKPTKQLPLPNLQLANMQFSKIFLVAATVASAAAAPAAELEARTTQPVKCKHHNGKWSYGWDGAADNEKYTCNTAGLLNVLTCVNILNGNTVNVNLLSILGL
Ga0315838_118564	Ga0315838_1185641	F030309	IPRWASEAVLRKSSNLQLIIEGKITKETAQQAPRDPKKISALKANGQALEAWQQLKADFKGTPLLKKPASSKEKAFKKRFDSLVSTYGQQPCFPKLRERPDQQGRSSPRGRSRSSGPGGDFLEMAKAFGEIARAFSGRSN
Ga0315838_119077	Ga0315838_1190771	F104166	PRGRGQGGGNPAAPGASLLLNPERAPALISKWQKLLGKDLESIQVEYKADGVAVQLFGMPGTVFEKKDGDGETVSITIPEYRDIKAKESAPSFEDAKFAFMNKFEVRLNQEFPQGVDLGDGSEAALRSAVQALPFHQRRVMLMSNKQFRTAYPNGFAGGANPPA
Ga0315838_119284	Ga0315838_1192841	F075502	LDEHLDPEGTLRNLLRRIANGEPCPSGLLTNTTEALQSFTKTLKVSARVASGSSTGTAKRVSFEEEGSYKVPLYETFVPGGVSLESKAPPRQLLSKSDTEEEFSDAEITQFLRDFAVSALGSGLNPQHFTVGK
Ga0315838_120059	Ga0315838_1200591	F080697	LLGLLLLTSLDLALFSTSDLLSLGSQFLSGLSVVKLLFDDLESSESVSGFILQQVVSVVVDQDETSRSTTTEMGVETEGNDILSVSLELLSDEVSDLFNRNISLTGVEDFQDHLFSGQKSVQQELLGFEYNGAVRH
Ga0315838_120068	Ga0315838_1200681	F018668	MAFFKTLFIASVAAFAYAAPQGGASDGNTKVGIDSQSNGAACGNGQKLACCNSGEDLIGLNCLSVPILAVPIQQACGSNVAACCQTGDADGNLINLELNCLALPL
Ga0315838_120324	Ga0315838_1203241	F037504	QPNNFPLPNLRSANMQFSKIFLVAATVASAAAAPTGELETRTAAPIKCQHHGGKWKYGWEGAADNEKYTCNTAGLLNVLTCVNILNGNTVNVNLLSILGL
Ga0315838_120540	Ga0315838_1205401	F089635	LTIGIMRNYKHTNILSNRVLKNLIESHTNILASVFATLVLGAEGSFLSGQQFISVFIDLELSDDDLRGVDGDINGLTVKLLLGELFDVDAPSKSIYLGDLTLVTL
Ga0315838_120701	Ga0315838_1207011	F044246	GDLSRFLSFLLLQGKERTSVAFPRRQRRGENGLCSLQRLCRRDRWALAHGCASIKRNLPKSCHRHTPSARSHWEATACSQPPPPSSDYLAHVRRVVTDTFRPGWDRSYHSFVGNHVPNPSARACKGRADALWAGRRGEFFTATTSEHGVVPHGLTGRYKDILSTGKTR
Ga0315838_120762	Ga0315838_1207621	F006377	VHSLSIIFVCRFVYMNIHIANLLEGSGRGTLGSTDTWLTMGSGLVGETELSHVSSDHVELDFDIGVFLTGVDTDNGSDHFGENNSVSEVSLDGGGLLTRLEVLLVLSELLDESLVFMLETSVESSLDSGSEEFDELFVLEGREILKGETSVGIFLGGTFLSYFTHVIC

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031070: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T17 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences