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Sample 3300031617
3300031617: Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P5_L6_32mM_3 (Metagenome Metatranscriptome)
Overview
Basic Information
IMG/M Taxon OID 3300031617 Open in IMG/M
GOLD Reference (Study | Sequencing Project | Analysis Project) Gs0128781 | Gp0267072 | Ga0228551
Sample Name Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P5_L6_32mM_3 (Metagenome Metatranscriptome)
Sequencing Status Permanent Draft
Sequencing Center DOE Joint Genome Institute (JGI)
Published? N
Use Policy Open
Dataset Contents
Total Genome Size 29290071
Sequencing Scaffolds 23
Novel Protein Genes 25
Associated Families 25
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii 10
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales 5
Not Available 1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila 4
All Organisms → cellular organisms → Eukaryota 1
All Organisms → cellular organisms → Eukaryota → Haptista 2
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Chrysochromulina Tobin Associated Microbial Communities From Unialgal Haptophyte Culture In Seattle, Washington, Usa
Type Engineered
Taxonomy Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified → Defined Medium → Chrysochromulina Tobin Associated Microbial Communities From Unialgal Haptophyte Culture In Seattle, Washington, Usa
Alternative Ecosystem Assignments
Environment Ontology (ENVO) Unclassified
Earth Microbiome Project Ontology (EMPO) Unclassified
Location Information
Location USA: Washington
Coordinates Lat. (o ) 47.6519 Long. (o ) -122.3113 Alt. (m) N/A Depth (m) N/A
Location on Map
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Associated Families
Associated Scaffolds
Sequences