UHGV-0000315 (vOTU-066102)

Viral Genome: UHGV-0000315

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0000315
vOTU ID	vOTU-066102
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_I_4_2616__NODE_1825_length_37202_cov_6.690559_1
Associated Biosample	SAMEA4766362
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	97.95 (High-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9783
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	33.62
Jumbo Phage?	No

Genome Content
Length (bps)	34,637
GC Content	42.74%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	49
CDS Density	91%
Average CDS Length (bps)	643.35
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0000315_1	K06334	115.7	3.9e-34	cotJC; spore coat protein JC	N/A
PHROG	UHGV-0000315_1	phrog_7573	66.0	6.1e-19	N/A	unknown function
UniRef90	UHGV-0000315_1	UniRef90_A0A1C5N2A2	133.0	1.72e-39	Manganese catalase	N/A
eggNOG-mapper	UHGV-0000315_1	411460.RUMTOR_00841	133.0	1.18e-38	N/A	N/A
Pfam	UHGV-0000315_1	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-0000315_1	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
KOfam	UHGV-0000315_2	K06400	246.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0000315_2	phrog_95	261.0	0	integrase	integration and excision
UniRef90	UHGV-0000315_2	UniRef90_A0A374E9M4	1021.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0000315_2	97139.C824_00068	713.0	0	Recombinase	N/A
Pfam	UHGV-0000315_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0000315_2	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0000315_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0000315_2	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_3	phrog_38135	63.7	1.7e-18	N/A	unknown function
UniRef90	UHGV-0000315_3	UniRef90_UPI001F3985DB	691.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000315_3	658088.HMPREF0987_00537	79.7	0.0000000000000909	DNA/RNA non-specific endonuclease	N/A
Pfam	UHGV-0000315_3	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-0000315_3	PF14020,PF21602	N/A	N/A	N/A	N/A
KOfam	UHGV-0000315_5	K18830	72.1	9.1e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0000315_5	phrog_2967	55.7	9.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000315_5	UniRef90_UPI0006C57785	240.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_5	445972.ANACOL_03315	147.0	2.8026e-44	N/A	N/A
Pfam	UHGV-0000315_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000315_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0000315_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_11	phrog_3584	153.0	1.4013e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0000315_11	665950.HMPREF1025_02552	314.0	0	N/A	N/A
structural_annotation	UHGV-0000315_11	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0000315_12	K03469	53.6	0.0000000000000045	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0000315_12	phrog_531	57.7	2.4e-16	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000315_12	UniRef90_A0A373MPV2	291.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-0000315_12	665950.HMPREF1025_02551	159.0	0	RNase H	N/A
Pfam	UHGV-0000315_12	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0000315_12	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0000315_12	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000315_13	1280698.AUJS01000007_gene1016	222.0	0	N/A	N/A
PHROG	UHGV-0000315_14	phrog_4433	68.4	1.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0000315_14	1280698.AUJS01000007_gene1017	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000315_15	1280698.AUJS01000007_gene1018	95.1	7.21e-22	N/A	N/A
PHROG	UHGV-0000315_16	phrog_8470	237.2	0	N/A	unknown function
UniRef90	UHGV-0000315_16	UniRef90_UPI001C01E393	585.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_16	1280698.AUJS01000007_gene1018	727.0	0	N/A	N/A
Pfam	UHGV-0000315_16	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0000315_16	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_17	phrog_15077	100.7	2.7e-29	N/A	unknown function
UniRef90	UHGV-0000315_17	UniRef90_A0A3A6HZA9	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000315_17	1280698.AUJS01000007_gene1019	363.0	0	N/A	N/A
structural_annotation	UHGV-0000315_17	PF11300,NF038070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000315_18	1235798.C817_01884	60.1	0.000000000108	N/A	N/A
PHROG	UHGV-0000315_19	phrog_7566	89.5	2.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0000315_19	97139.C824_00037	114.0	5.54e-32	N/A	N/A
KOfam	UHGV-0000315_21	K18830	47.1	0.00000000000057	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0000315_21	phrog_8	45.5	0.0000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000315_21	UniRef90_A0A844KFT8	140.0	3.87039e-42	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_21	1048834.TC41_2515	51.2	0.000000162	sequence-specific DNA binding	N/A
Pfam	UHGV-0000315_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000315_21	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0000315_23	phrog_36	93.8	1.9e-27	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000315_23	UniRef90_A0A373STV4	281.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000315_23	411461.DORFOR_00754	153.0	1.4013e-45	sigma factor activity	N/A
Pfam	UHGV-0000315_23	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0000315_23	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0000315_23	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0000315_25	K07451	47.6	0.0000000000003	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0000315_25	phrog_119	81.7	7.2e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000315_25	UniRef90_A0A1Q6K9L9	214.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_25	1232452.BAIB02000007_gene1631	94.7	8.8e-24	HNH nucleases	N/A
Pfam	UHGV-0000315_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0000315_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0000315_26	phrog_5110	81.7	6.5e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0000315_26	UniRef90_A0A1C5LZF0	89.0	6.58e-21	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0000315_26	1211817.CCAT010000008_gene938	67.0	0.000000000000956	Phage terminase, small subunit	N/A
COG	UHGV-0000315_26	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000315_26	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_27	phrog_9	257.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0000315_27	UniRef90_D4M588	1112.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0000315_27	1232452.BAIB02000007_gene1629	525.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0000315_27	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0000315_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0000315_27	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0000315_27	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_28	phrog_12	61.9	4.6e-18	portal protein	head and packaging
UniRef90	UHGV-0000315_28	UniRef90_UPI00156D5DC9	591.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0000315_28	1232452.BAIB02000007_gene1627	280.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0000315_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0000315_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0000315_28	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0000315_29	K01358	153.5	1.4013e-45	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0000315_29	phrog_94	229.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0000315_29	UniRef90_UPI00156EEE56	366.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0000315_29	1232452.BAIB02000007_gene1626	266.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0000315_29	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0000315_29	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0000315_29	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_30	phrog_10	89.7	2.8e-26	major head protein	head and packaging
UniRef90	UHGV-0000315_30	UniRef90_D4M591	728.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0000315_30	1232452.BAIB02000007_gene1625	471.0	0	Phage capsid family	N/A
Pfam	UHGV-0000315_30	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0000315_30	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0000315_30	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0000315_30	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_31	phrog_749	40.2	0.000000000058	N/A	unknown function
UniRef90	UHGV-0000315_32	UniRef90_D4M593	240.0	0	Phage head-tail adaptor, putative, SPP1 family	N/A
NCBIFam	UHGV-0000315_32	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0000315_32	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000315_33	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_34	phrog_5	47.9	0.00000000000032	tail completion or Neck1 protein	connector
UniRef90	UHGV-0000315_34	UniRef90_D4M595	243.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0000315_34	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0000315_34	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_35	phrog_88	97.6	1.3e-28	major tail protein	tail
UniRef90	UHGV-0000315_35	UniRef90_D4M596	385.0	0	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-0000315_35	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0000315_35	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0000315_35	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0000315_37	K10421	47.8	0.000000000000095	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0000315_37	phrog_23464	201.3	0	N/A	unknown function
UniRef90	UHGV-0000315_37	UniRef90_A0A7G5N113	204.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0000315_37	1232452.BAIB02000007_gene1616	468.0	0	phage tail tape measure protein	N/A
COG	UHGV-0000315_37	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0000315_38	phrog_33	72.1	1.2e-20	distal tail protein Dit	tail
UniRef90	UHGV-0000315_38	UniRef90_D4M599	471.0	0	Phage putative tail component, N-terminal domain	N/A
eggNOG-mapper	UHGV-0000315_38	1235798.C817_02569	211.0	0	tail component	N/A
COG	UHGV-0000315_38	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0000315_38	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_39	phrog_13289	416.3	0	tail protein	tail
UniRef90	UHGV-0000315_39	UniRef90_A0A1Q6KA70	1147.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_39	1232446.BAIE02000002_gene836	473.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0000315_39	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0000315_39	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0000315_39	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0000315_39	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_40	phrog_11037	132.0	6.3e-39	N/A	unknown function
UniRef90	UHGV-0000315_40	UniRef90_A0A1Q6K9M8	646.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_40	33035.JPJF01000093_gene2240	305.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0000315_40	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0000315_40	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-0000315_40	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0000315_40	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000315_41	349123.Lreu23DRAFT_3172	67.0	0.0000000107	N/A	N/A
structural_annotation	UHGV-0000315_42	PF00041	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_43	phrog_15594	107.7	5.1e-32	N/A	unknown function
structural_annotation	UHGV-0000315_43	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_44	phrog_31538	78.2	9.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-0000315_44	411460.RUMTOR_01351	49.3	0.00000796	N/A	N/A
PHROG	UHGV-0000315_45	phrog_13589	193.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0000315_45	742733.HMPREF9469_05009	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000315_46	411460.RUMTOR_01324	56.2	0.000000676	N/A	N/A
PHROG	UHGV-0000315_47	phrog_4105	95.3	3.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0000315_47	411459.RUMOBE_00911	169.0	0	N/A	N/A
PHROG	UHGV-0000315_48	phrog_18218	134.4	3.3e-40	N/A	unknown function
UniRef90	UHGV-0000315_48	UniRef90_A0A373SUI3	191.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-0000315_48	658655.HMPREF0988_02546	153.0	0	N/A	N/A
structural_annotation	UHGV-0000315_48	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0000315_49	phrog_3393	46.0	0.0000000000008	endolysin	lysis
UniRef90	UHGV-0000315_49	UniRef90_A0A3E4LXG7	509.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000315_49	1232453.BAIF02000059_gene1616	157.0	8.96831e-43	Ami_2	N/A
Pfam	UHGV-0000315_49	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0000315_49	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0000315_49	PF05382,NF033743,COG5492,COG0791	N/A	N/A	N/A	N/A