UHGV-0003097 (vOTU-161359)

Viral Genome: UHGV-0003097

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0003097
vOTU ID	vOTU-161359
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_B_9_1942__NODE_443_length_120084_cov_12.054563_1
Associated Biosample	SAMEA4766118
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	74.13 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	23
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9817
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	41.94
Jumbo Phage?	No

Genome Content
Length (bps)	31,420
GC Content	43.06%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	41
CDS Density	96%
Average CDS Length (bps)	738.07
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 74.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0003097_1	K01447	95.5	7.4e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0003097_1	phrog_3088	189.6	0	amidase	lysis
UniRef90	UHGV-0003097_1	UniRef90_A0A415FLM8	818.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0003097_1	411459.RUMOBE_00909	566.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0003097_1	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0003097_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0003097_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0003097_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0003097_1	PF01832,MF_04111,NF008758,TIGR02541,COG5632,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_2	phrog_18218	136.5	7.39998e-41	N/A	unknown function
UniRef90	UHGV-0003097_2	UniRef90_A0A352BLY3	196.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-0003097_2	411459.RUMOBE_00910	167.0	0	N/A	N/A
structural_annotation	UHGV-0003097_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_3	phrog_4105	68.1	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0003097_3	411459.RUMOBE_00911	118.0	3.11e-34	N/A	N/A
KOfam	UHGV-0003097_7	K00986	98.3	8.8e-29	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0003097_7	phrog_1423	188.0	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003097_7	UniRef90_A0A3C1LSM0	372.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0003097_7	1160721.RBI_I01568	231.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0003097_7	icity0040	94.4	1.8e-27	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0003097_7	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0003097_7	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0003097_7	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_8	phrog_3206	42.2	0.000000000011	Avd protein of DGR	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0003097_8	525254.HMPREF0072_1280	68.2	0.0000000000011	N/A	N/A
structural_annotation	UHGV-0003097_8	PF05635,MF_04067,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_9	phrog_16164	171.1	0	N/A	unknown function
UniRef90	UHGV-0003097_9	UniRef90_A0A3C1LU86	311.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003097_9	33035.JPJF01000093_gene2236	77.0	0.00000000000051	N/A	N/A
Pfam	UHGV-0003097_9	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0003097_10	phrog_7841	57.5	2.3e-16	N/A	unknown function
UniRef90	UHGV-0003097_10	UniRef90_A0A415FLM5	1064.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0003097_10	1232453.BAIF02000059_gene1614	63.9	0.0000000646	N/A	N/A
Pfam	UHGV-0003097_10	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0003097_11	PF08931	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_12	phrog_16267	108.1	0	N/A	unknown function
UniRef90	UHGV-0003097_12	UniRef90_UPI001C10B551	895.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0003097_12	411459.RUMOBE_00923	669.0	0	N/A	N/A
COG	UHGV-0003097_12	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0003097_12	PF05113,PF02010,NF033848,NF011764,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_13	phrog_1401	77.1	2e-22	N/A	unknown function
UniRef90	UHGV-0003097_13	UniRef90_A0A7C6P910	85.9	4.68e-19	N/A	N/A
eggNOG-mapper	UHGV-0003097_13	1232453.BAIF02000058_gene1640	100.0	1.05e-25	N/A	N/A
structural_annotation	UHGV-0003097_13	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_14	phrog_2566	70.8	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0003097_14	1499683.CCFF01000014_gene3898	57.4	0.000000000849	N/A	N/A
PHROG	UHGV-0003097_15	phrog_1194	89.8	2.1e-26	N/A	unknown function
UniRef90	UHGV-0003097_15	UniRef90_R5Z572	64.7	0.0000000000195	Putative phage protein	N/A
eggNOG-mapper	UHGV-0003097_15	1232453.BAIF02000058_gene1638	161.0	0	N/A	N/A
structural_annotation	UHGV-0003097_15	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_16	phrog_1535	258.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0003097_16	UniRef90_A0A448W7L1	1031.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0003097_16	1232453.BAIF02000058_gene1637	204.0	0	phage tail tape measure protein	N/A
COG	UHGV-0003097_16	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0003097_17	phrog_2066	79.3	4.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0003097_17	1123304.AQYA01000037_gene232	65.1	0.00000000000709	N/A	N/A
PHROG	UHGV-0003097_18	phrog_183	42.3	0.0000000000095	tail chaperone protein	tail
UniRef90	UHGV-0003097_18	UniRef90_UPI001EE8B5C4	154.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0003097_18	1235800.C819_00478	100.0	6.26e-25	N/A	N/A
Pfam	UHGV-0003097_18	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0003097_18	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_19	phrog_158	54.6	0.0000000000000023	major tail protein	tail
UniRef90	UHGV-0003097_19	UniRef90_A0A415FLM9	281.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0003097_19	742733.HMPREF9469_01817	174.0	0	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0003097_19	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003097_20	1235800.C819_00480	141.0	7.43949e-42	N/A	N/A
structural_annotation	UHGV-0003097_20	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_21	phrog_5	79.2	6.9e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-0003097_21	UniRef90_A0A415FLN0	329.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0003097_21	742733.HMPREF9469_01819	172.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0003097_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0003097_21	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0003097_21	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_22	phrog_2168	111.2	4e-33	N/A	unknown function
eggNOG-mapper	UHGV-0003097_22	742733.HMPREF9469_01820	128.0	1.34e-36	N/A	N/A
structural_annotation	UHGV-0003097_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_23	phrog_132	89.4	2.7e-26	head-tail adaptor	connector
UniRef90	UHGV-0003097_23	UniRef90_A0A1G5F1K3	184.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0003097_23	742733.HMPREF9469_01821	155.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0003097_23	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0003097_23	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_24	phrog_2724	63.2	4.6e-18	N/A	unknown function
UniRef90	UHGV-0003097_24	UniRef90_A0A564VY53	138.0	2.76995e-41	Rho_N domain-containing protein	N/A
Pfam	UHGV-0003097_24	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-0003097_24	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-0003097_24	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_25	phrog_422	297.0	0	major head protein	head and packaging
UniRef90	UHGV-0003097_25	UniRef90_A0A2H4JCM6	499.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0003097_25	742733.HMPREF9469_01823	506.0	0	N/A	N/A
structural_annotation	UHGV-0003097_25	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_26	phrog_172	158.3	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0003097_26	UniRef90_A0A415FLT0	334.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003097_26	742733.HMPREF9469_01824	214.0	0	N/A	N/A
Pfam	UHGV-0003097_26	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0003097_26	PF14265	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003097_27	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_28	phrog_1865	64.7	9.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0003097_28	1391647.AVSV01000003_gene1805	53.9	0.00000000838	N/A	N/A
structural_annotation	UHGV-0003097_28	PF07073,MF_00436,TIGR02383,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_29	phrog_115	329.0	0	minor head protein	head and packaging
UniRef90	UHGV-0003097_29	UniRef90_A0A564VY65	964.0	0	NAD(+)--arginine ADP-ribosyltransferase EFV	N/A
eggNOG-mapper	UHGV-0003097_29	1235800.C819_00488	356.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0003097_29	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0003097_29	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
NCBIFam	UHGV-0003097_29	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0003097_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003097_29	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_30	phrog_64	392.3	0	portal protein	head and packaging
UniRef90	UHGV-0003097_30	UniRef90_A0A564VYQ1	895.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0003097_30	742733.HMPREF9469_01826	583.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0003097_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0003097_30	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0003097_30	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0003097_31	K06909	148.7	5.46506e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0003097_31	phrog_10250	226.0	0	N/A	unknown function
UniRef90	UHGV-0003097_31	UniRef90_A0A1G5F2L0	871.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0003097_31	903814.ELI_3215	652.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0003097_31	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0003097_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0003097_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0003097_31	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_32	phrog_1889	255.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0003097_32	UniRef90_UPI00189EABEF	402.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0003097_32	33035.JPJF01000107_gene435	258.0	0	N/A	N/A
Pfam	UHGV-0003097_32	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0003097_32	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0003097_32	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003097_32	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_33	phrog_3634	121.0	8e-36	N/A	unknown function
eggNOG-mapper	UHGV-0003097_33	498211.CJA_0810	167.0	0	phosphatase homologous to the C-terminal domain of histone macroH2A1	N/A
COG	UHGV-0003097_33	COG2110	N/A	N/A	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	N/A
PHROG	UHGV-0003097_34	phrog_36	85.7	5.7e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-0003097_34	UniRef90_A0A1C5VKJ4	244.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0003097_34	665950.HMPREF1025_02539	110.0	3.77e-29	sigma factor activity	N/A
Pfam	UHGV-0003097_34	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0003097_34	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0003097_34	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0003097_35	K04087	78.9	4.8e-23	hflC; modulator of FtsH protease HflC	N/A
PHROG	UHGV-0003097_35	phrog_200	147.4	0	lipoprotein	other
UniRef90	UHGV-0003097_35	UniRef90_A0A416QWZ0	450.0	0	Prohibitin family protein	N/A
eggNOG-mapper	UHGV-0003097_35	537007.BLAHAN_05484	306.0	0	prohibitin homologues	N/A
Pfam	UHGV-0003097_35	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0003097_35	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-0003097_35	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-0003097_37	phrog_6568	41.0	0.000000000025	N/A	unknown function
PHROG	UHGV-0003097_39	phrog_2776	81.4	4.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0003097_39	1298920.KI911353_gene2703	193.0	0	N/A	N/A
structural_annotation	UHGV-0003097_39	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A