UHGV-0003906 (vOTU-154868)

Viral Genome: UHGV-0003906

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0003906
vOTU ID	vOTU-154868
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-A-D_D_16_1621__NODE_3382_length_41407_cov_10.959327_1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	87.55 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	17
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9755
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.4
Jumbo Phage?	No

Genome Content
Length (bps)	35,952
GC Content	51.06%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	43
CDS Density	94%
Average CDS Length (bps)	782.44
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0003906_1	K07727	50.6	0.000000000000051	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0003906_1	phrog_1373	44.5	0.0000000000027	transcriptional regulator	transcription regulation
UniRef90	UHGV-0003906_1	UniRef90_UPI001D007243	119.0	5.47e-34	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0003906_1	861454.HMPREF9099_00333	66.6	0.0000000000000923	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0003906_1	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0003906_1	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_4	phrog_31564	114.0	6.5e-34	N/A	unknown function
PHROG	UHGV-0003906_9	phrog_18562	55.4	0.0000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0003906_9	717606.PaecuDRAFT_3099	59.7	0.00000000414	N/A	N/A
PHROG	UHGV-0003906_10	phrog_69	355.2	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003906_10	UniRef90_A0A3G2R530	410.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003906_10	1449126.JQKL01000006_gene838	392.0	0	N/A	N/A
Pfam	UHGV-0003906_10	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0003906_10	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0003906_10	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_11	phrog_112	180.9	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003906_11	UniRef90_A0A3G2R4B8	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-0003906_11	1449126.JQKL01000006_gene839	239.0	0	N/A	N/A
Pfam	UHGV-0003906_11	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0003906_11	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
KOfam	UHGV-0003906_12	K02334	868.3	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0003906_12	phrog_17	402.7	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003906_12	UniRef90_UPI0014517056	863.0	0	DNA polymerase	N/A
eggNOG-mapper	UHGV-0003906_12	1449126.JQKL01000006_gene840	860.0	0	DNA polymerase	N/A
Pfam	UHGV-0003906_12	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0003906_12	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0003906_12	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_13	phrog_256	1021.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003906_13	UniRef90_A0A3G2R4E0	1022.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-0003906_13	1321778.HMPREF1982_02544	973.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0003906_13	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0003906_13	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0003906_13	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_14	phrog_93	62.5	5.9e-18	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003906_14	UniRef90_UPI001B1C1B04	95.5	1.13e-23	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0003906_14	1000569.HMPREF1040_0204	93.2	1.77e-23	VRR_NUC	N/A
structural_annotation	UHGV-0003906_14	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A
KOfam	UHGV-0003906_15	K14440	114.9	1.2e-34	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0003906_15	phrog_62	393.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0003906_15	UniRef90_A0A327YN49	639.0	0	SNF2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0003906_15	86416.Clopa_0567	618.0	0	snf2 family	N/A
PADLOC	UHGV-0003906_15	DpdE_00010	78.4	9.7e-23	DpdE	DPD
Pfam	UHGV-0003906_15	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0003906_15	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0003906_15	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0003906_15	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003906_16	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0003906_17	K07474	81.6	2e-23	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0003906_17	phrog_51	74.5	3e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0003906_17	UniRef90_R6RJD3	166.0	0	Phage Terminase Small Subunit	N/A
eggNOG-mapper	UHGV-0003906_17	1160721.RBI_II00483	103.0	1.21e-26	DNA packaging	N/A
Pfam	UHGV-0003906_17	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0003906_17	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0003906_17	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0003906_18	K06909	95.9	5e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0003906_18	phrog_2	81.7	1.4e-23	terminase large subunit	head and packaging
UniRef90	UHGV-0003906_18	UniRef90_A0A373XSH6	639.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0003906_18	1282664.H354_06621	531.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0003906_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0003906_18	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_19	phrog_533	258.6	0	portal protein	head and packaging
UniRef90	UHGV-0003906_19	UniRef90_A0A3D5LTG9	513.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0003906_19	742740.HMPREF9474_03501	479.0	0	N/A	N/A
structural_annotation	UHGV-0003906_19	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_20	phrog_581	261.5	0	minor head protein	head and packaging
UniRef90	UHGV-0003906_20	UniRef90_UPI0018AA82F0	306.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0003906_20	1282664.H354_06636	280.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0003906_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
PHROG	UHGV-0003906_22	phrog_2303	93.5	2.7e-27	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0003906_22	1298920.KI911353_gene4851	110.0	1.32e-27	N/A	N/A
PHROG	UHGV-0003906_23	phrog_422	298.9	0	major head protein	head and packaging
UniRef90	UHGV-0003906_23	UniRef90_A0A413RCT9	389.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0003906_23	552396.HMPREF0863_01635	371.0	0	N/A	N/A
structural_annotation	UHGV-0003906_23	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_24	phrog_1378	57.5	2.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0003906_24	1298920.KI911353_gene4849	54.3	0.00000000809	N/A	N/A
PHROG	UHGV-0003906_25	phrog_541	75.0	8.5e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0003906_25	1304866.K413DRAFT_0783	117.0	2.54e-32	N/A	N/A
PHROG	UHGV-0003906_26	phrog_8710	106.7	1.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0003906_26	33035.JPJF01000093_gene2249	97.4	8.3e-25	N/A	N/A
structural_annotation	UHGV-0003906_26	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_27	phrog_556	78.7	6.1e-23	minor head protein	head and packaging
eggNOG-mapper	UHGV-0003906_27	742740.HMPREF9474_03509	128.0	9.95e-37	N/A	N/A
PHROG	UHGV-0003906_28	phrog_2595	83.6	2.1e-24	head-tail connector protein	connector
UniRef90	UHGV-0003906_28	UniRef90_UPI0003F673FD	94.7	2.08e-22	minor capsid protein	N/A
eggNOG-mapper	UHGV-0003906_28	33035.JPJF01000093_gene2247	96.7	6.31e-24	N/A	N/A
Pfam	UHGV-0003906_28	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0003906_28	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_29	phrog_820	111.7	4.4e-33	major tail protein	tail
eggNOG-mapper	UHGV-0003906_29	1507.HMPREF0262_01184	164.0	0	domain, Protein	N/A
COG	UHGV-0003906_29	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003906_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_30	phrog_8300	83.3	2.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0003906_30	1122918.KB907248_gene4491	81.3	1.61e-18	N/A	N/A
structural_annotation	UHGV-0003906_30	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_31	phrog_8355	102.4	1.3e-30	N/A	unknown function
UniRef90	UHGV-0003906_31	UniRef90_M9Q2I4	115.0	1.19e-30	Putative phage protein	N/A
eggNOG-mapper	UHGV-0003906_31	394503.Ccel_3283	103.0	1.26e-26	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0003906_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0003906_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_32	phrog_1535	401.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0003906_32	UniRef90_A0A1C5RGR7	466.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0003906_32	33035.JPJF01000093_gene2243	494.0	0	phage tail tape measure protein	N/A
COG	UHGV-0003906_32	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0003906_32	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_33	phrog_1194	93.8	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0003906_33	1211844.CBLM010000016_gene1481	53.9	0.000000116	N/A	N/A
Pfam	UHGV-0003906_33	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0003906_33	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_34	phrog_23052	115.5	1.19993e-41	N/A	unknown function
eggNOG-mapper	UHGV-0003906_34	946235.CAER01000065_gene2433	134.0	3.82e-30	N/A	N/A
structural_annotation	UHGV-0003906_34	PF14879,PF09931,NF033848,NF033147,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_35	phrog_19291	100.0	2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0003906_35	1232449.BAHV02000021_gene1072	227.0	0	N/A	N/A
structural_annotation	UHGV-0003906_35	PF02191,COG3823	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0003906_36	411473.RUMCAL_00420	667.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0003906_36	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0003906_37	phrog_199	86.1	3.7e-25	holin	lysis
UniRef90	UHGV-0003906_37	UniRef90_UPI001D02B647	239.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0003906_37	742740.HMPREF9474_02333	177.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0003906_37	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0003906_37	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0003906_37	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0003906_37	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0003906_38	K07273	208.2	0	acm; lysozyme	N/A
PHROG	UHGV-0003906_38	phrog_291	179.9	0	endolysin	lysis
UniRef90	UHGV-0003906_38	UniRef90_UPI001D002A5A	405.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0003906_38	1341157.RF007C_02545	253.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0003906_38	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0003906_38	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0003906_38	PF01183,MF_00152,NF008522,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0003906_39	phrog_22717	100.2	1e-33	N/A	unknown function
UniRef90	UHGV-0003906_39	UniRef90_A0A7Y5A3F7	501.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0003906_39	228410.NE0256	507.0	0	N/A	N/A
KOfam	UHGV-0003906_40	K06400	145.1	5.60519e-43	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0003906_40	phrog_95	170.3	0	integrase	integration and excision
UniRef90	UHGV-0003906_40	UniRef90_U2M5Z6	389.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0003906_40	411473.RUMCAL_00465	389.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0003906_40	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0003906_40	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
eggNOG-mapper	UHGV-0003906_43	478749.BRYFOR_07701	157.0	0	N/A	N/A