UHGV-0006723 (vOTU-064451)

Viral Genome: UHGV-0006723

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0006723
vOTU ID	vOTU-064451
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_B_9_1942__NODE_235_length_156431_cov_32.188860_1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9794
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	43.77
Jumbo Phage?	No

Genome Content
Length (bps)	43,905
GC Content	51.01%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	44
CDS Density	96%
Average CDS Length (bps)	954.48
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0006723_1	phrog_9589	77.0	8.7e-25	endolysin	lysis
UniRef90	UHGV-0006723_1	UniRef90_A0A843FKE1	173.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0006723_1	1123075.AUDP01000020_gene1533	145.0	1.19e-37	pathogenesis	N/A
Pfam	UHGV-0006723_1	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0006723_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0006723_1	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0006723_1	PF01471,PF06940,TIGR02594,NF038080,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_2	phrog_10089	1546.6	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0006723_2	411483.FAEPRAA2165_00565	1077.0	0	N/A	N/A
Pfam	UHGV-0006723_2	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0006723_2	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0006723_2	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
KOfam	UHGV-0006723_3	K22519	47.9	0.0000000000001	PTAC5; protein disulfide-isomerase [EC:5.3.4.1]	N/A
PHROG	UHGV-0006723_3	phrog_2649	70.3	4.1e-20	endolysin	lysis
UniRef90	UHGV-0006723_3	UniRef90_A0A645A9U3	179.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0006723_3	1203606.HMPREF1526_02741	92.0	4.35e-18	N/A	N/A
Pfam	UHGV-0006723_3	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
structural_annotation	UHGV-0006723_3	PF01471,TIGR02869,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_4	phrog_372	237.9	0	tail protein	tail
UniRef90	UHGV-0006723_4	UniRef90_UPI0013F5D6AA	145.0	4.58e-33	N/A	N/A
eggNOG-mapper	UHGV-0006723_4	552396.HMPREF0863_01449	149.0	3.91e-35	N/A	N/A
Pfam	UHGV-0006723_4	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0006723_4	PF05895,PF08931,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-0006723_5	K06823	75.2	2.8e-22	COL18A; collagen type XVIII alpha	N/A
PHROG	UHGV-0006723_5	phrog_6320	44.1	6.2e-18	tail fiber protein	tail
eggNOG-mapper	UHGV-0006723_5	411901.BACCAC_00720	169.0	3.41006e-41	chlorophyll binding	N/A
Pfam	UHGV-0006723_5	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0006723_5	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
PHROG	UHGV-0006723_6	phrog_511	245.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0006723_6	1410650.JHWL01000003_gene2827	359.0	0	N/A	N/A
structural_annotation	UHGV-0006723_6	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_7	phrog_12105	126.0	1.6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0006723_7	1226322.HMPREF1545_03850	95.5	1.2e-23	N/A	N/A
PHROG	UHGV-0006723_9	phrog_1357	213.5	0	major head protein	head and packaging
UniRef90	UHGV-0006723_9	UniRef90_A0A2V2CFL5	620.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0006723_9	1410650.JHWL01000003_gene2830	256.0	0	N/A	N/A
Pfam	UHGV-0006723_9	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0006723_9	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0006723_9	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_10	phrog_13908	196.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0006723_10	1410650.JHWL01000003_gene2831	111.0	2.95e-25	N/A	N/A
KOfam	UHGV-0006723_11	K07584	53.8	0.0000000000000036	N/A	N/A
PHROG	UHGV-0006723_11	phrog_4478	55.4	5.1e-16	peptidase	other
UniRef90	UHGV-0006723_11	UniRef90_UPI00102FFAFD	64.7	0.0000000000223	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0006723_11	1048834.TC41_1911	55.8	0.0000000128	Cysteine protease Prp	N/A
Pfam	UHGV-0006723_11	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0006723_11	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006723_11	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_12	phrog_156	298.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0006723_12	1410650.JHWL01000003_gene2833	556.0	0	N/A	N/A
structural_annotation	UHGV-0006723_12	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0006723_13	K06909	143.6	1.49939e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0006723_13	phrog_979	133.7	3.80004e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0006723_13	UniRef90_A0A810Q5R0	603.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0006723_13	1410650.JHWL01000003_gene2834	568.0	0	N/A	N/A
Pfam	UHGV-0006723_13	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0006723_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0006723_13	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_14	phrog_1206	42.2	5.9e-16	terminase small subunit	head and packaging
PHROG	UHGV-0006723_15	phrog_2245	102.7	2.7e-30	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0006723_15	1567010.A0A0A7RU90_9VIRU	93.6	5.06e-22	protein disulfide oxidoreductase activity	N/A
Pfam	UHGV-0006723_18	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0006723_18	PF04448	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006723_19	UniRef90_R6QWY1	105.0	9.66e-28	28	N/A
PHROG	UHGV-0006723_23	phrog_9298	249.0	0	radical SAM domain protein	other
UniRef90	UHGV-0006723_23	UniRef90_A0A6L5TFB3	439.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0006723_23	1235800.C819_00846	286.0	0	N/A	N/A
COG	UHGV-0006723_23	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0006723_23	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_24	phrog_757	182.7	0	DNA methyltransferase	other
UniRef90	UHGV-0006723_24	UniRef90_A0A417JTT5	250.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0006723_24	1095750.HMPREF9970_0173	255.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0006723_24	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0006723_24	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_25	phrog_1384	117.4	9e-35	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0006723_25	428125.CLOLEP_01816	175.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0006723_25	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_26	phrog_22529	94.2	8.7e-28	N/A	unknown function
UniRef90	UHGV-0006723_26	UniRef90_A0A1I0GQX9	92.4	6.81e-21	3D (Asp-Asp-Asp) domain-containing protein	N/A
eggNOG-mapper	UHGV-0006723_26	742735.HMPREF9467_00339	92.4	2.26e-20	3D domain	N/A
Pfam	UHGV-0006723_26	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0006723_26	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0006723_26	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_27	phrog_14105	44.3	0.000000000000006	N/A	unknown function
eggNOG-mapper	UHGV-0006723_27	268407.PWYN_12330	61.6	0.0000000624	dextransucrase activity	N/A
COG	UHGV-0006723_27	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-0006723_28	K01160	48.7	0.0000000000002	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0006723_28	phrog_4632	47.2	0.000000000000099	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006723_28	UniRef90_A0A7X8IB41	125.0	1.28e-34	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0006723_28	469604.HMPREF0946_00819	52.4	0.000000627	N/A	N/A
structural_annotation	UHGV-0006723_28	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006723_29	TIGR00122,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_31	phrog_11769	158.4	0	N/A	unknown function
UniRef90	UHGV-0006723_31	UniRef90_G2FNN3	113.0	4.91e-26	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-0006723_31	411470.RUMGNA_02197	172.0	0	phage replisome	N/A
Pfam	UHGV-0006723_31	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0006723_31	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0006723_31	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
KOfam	UHGV-0006723_32	K03111	123.5	2.6e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0006723_32	phrog_44	134.1	9.5e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006723_32	UniRef90_A0A3C0NMR0	166.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0006723_32	693746.OBV_19910	149.0	1.4013e-44	Single-strand binding protein family	N/A
Pfam	UHGV-0006723_32	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0006723_32	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0006723_32	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0006723_32	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0006723_32	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0006723_33	K07455	178.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0006723_33	phrog_148	179.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006723_33	UniRef90_UPI000F05C9E1	322.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0006723_33	1243664.CAVL020000020_gene3198	191.0	0	RecT family	N/A
Pfam	UHGV-0006723_33	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0006723_33	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0006723_33	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0006723_33	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0006723_34	phrog_434	326.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006723_34	UniRef90_UPI00164B76E0	301.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0006723_34	1121344.JHZO01000003_gene985	286.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0006723_34	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0006723_34	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0006723_34	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0006723_34	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006723_38	UniRef90_A0A3E2N8P7	89.0	2.18e-21	N/A	N/A
eggNOG-mapper	UHGV-0006723_38	1121947.AUHK01000002_gene903	77.4	1.33e-17	N/A	N/A
Pfam	UHGV-0006723_38	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0006723_38	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0006723_38	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0006723_41	K07729	60.1	5.1e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0006723_41	phrog_3	41.4	0.000000000053	transcriptional repressor	transcription regulation
UniRef90	UHGV-0006723_41	UniRef90_A0A810QAJ3	66.6	0.000000000000307	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0006723_41	321955.AAGP01000036_gene3441	56.6	0.00000000064	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0006723_41	retron_type_VI_hth_cluster2_1	43.2	0.000000000011	N/A	Retron
Pfam	UHGV-0006723_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0006723_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0006723_41	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0006723_43	PF09811	N/A	N/A	Essential protein Yae1, N terminal	Yae1_N
KOfam	UHGV-0006723_44	K06400	361.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0006723_44	phrog_95	357.5	0	integrase	integration and excision
UniRef90	UHGV-0006723_44	UniRef90_B0P5W1	375.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0006723_44	445972.ANACOL_00133	375.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0006723_44	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0006723_44	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0006723_44	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0006723_44	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A