UHGV-0007533 (vOTU-084232)

Viral Genome: UHGV-0007533

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0007533
vOTU ID	vOTU-084232
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_C_1_1708__NODE_995_length_45255_cov_14.031940_1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	94.55 (High-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9789
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31
Jumbo Phage?	No

Genome Content
Length (bps)	40,056
GC Content	41.59%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	48
CDS Density	93%
Average CDS Length (bps)	777.00
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0007533_1	phrog_4105	69.2	5.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0007533_1	397288.C806_00056	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007533_2	457412.RSAG_04673	80.9	1.75e-19	N/A	N/A
eggNOG-mapper	UHGV-0007533_3	411461.DORFOR_00727	46.6	0.00000368	N/A	N/A
eggNOG-mapper	UHGV-0007533_4	33035.JPJF01000043_gene999	63.2	0.0000000000241	N/A	N/A
KOfam	UHGV-0007533_5	K00986	107.5	1.5e-31	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0007533_5	phrog_1423	154.8	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007533_5	UniRef90_A0A417A9G0	758.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0007533_5	33035.JPJF01000043_gene1000	234.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0007533_5	icity0040	66.2	5.3e-19	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0007533_5	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0007533_5	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0007533_5	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_6	phrog_17147	191.3	0	N/A	unknown function
UniRef90	UHGV-0007533_6	UniRef90_A0A374JQW7	455.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007533_6	33035.JPJF01000043_gene1001	155.0	4.27e-37	N/A	N/A
PHROG	UHGV-0007533_8	phrog_9915	76.5	1.8e-22	N/A	unknown function
PHROG	UHGV-0007533_9	phrog_18190	106.1	2.2e-33	N/A	unknown function
UniRef90	UHGV-0007533_9	UniRef90_UPI000E4C0A8F	1278.0	0	bacterial Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0007533_9	428125.CLOLEP_00457	193.0	0	endo-1,4-beta-xylanase activity	N/A
Pfam	UHGV-0007533_9	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
Pfam	UHGV-0007533_9	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
COG	UHGV-0007533_9	COG0683	N/A	N/A	ABC-type branched-chain amino acid transport system, periplasmic component	N/A
structural_annotation	UHGV-0007533_9	PF13306,PF07523,PF05113,NF033848,NF040978,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_10	phrog_1194	60.9	1.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0007533_10	742733.HMPREF9469_01808	101.0	1.01e-25	N/A	N/A
Pfam	UHGV-0007533_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0007533_10	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_11	phrog_1535	319.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0007533_11	UniRef90_A0A173R880	629.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0007533_11	476272.RUMHYD_01785	669.0	0	phage tail tape measure protein	N/A
COG	UHGV-0007533_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007533_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_12	phrog_706	134.1	7.80001e-40	N/A	unknown function
UniRef90	UHGV-0007533_12	UniRef90_A0A173TZF2	193.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0007533_12	411459.RUMOBE_01383	286.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0007533_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0007533_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_13	phrog_11299	69.1	7.2e-20	N/A	unknown function
structural_annotation	UHGV-0007533_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_14	phrog_3099	128.3	4.9e-38	N/A	unknown function
eggNOG-mapper	UHGV-0007533_14	1304866.K413DRAFT_3043	162.0	0	N/A	N/A
structural_annotation	UHGV-0007533_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_15	phrog_3266	112.8	2e-33	tail completion	connector
eggNOG-mapper	UHGV-0007533_15	658655.HMPREF0988_02556	54.3	0.000000267	N/A	N/A
structural_annotation	UHGV-0007533_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_16	phrog_556	71.7	9.2e-21	minor head protein	head and packaging
UniRef90	UHGV-0007533_16	UniRef90_UPI00156EFCF3	234.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0007533_16	1449050.JNLE01000003_gene3886	83.6	1.61e-18	N/A	N/A
Pfam	UHGV-0007533_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0007533_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_17	phrog_3366	68.3	5.4e-20	N/A	unknown function
Pfam	UHGV-0007533_17	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0007533_17	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_18	phrog_541	85.8	4.2e-25	head-tail adaptor	connector
UniRef90	UHGV-0007533_18	UniRef90_A0A371AQT0	77.8	6.52e-16	N/A	N/A
eggNOG-mapper	UHGV-0007533_18	1304866.K413DRAFT_3039	67.8	0.000000000000947	N/A	N/A
PHROG	UHGV-0007533_19	phrog_10	174.1	0	major head protein	head and packaging
UniRef90	UHGV-0007533_19	UniRef90_A0A396PT94	555.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0007533_19	411461.DORFOR_00744	541.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-0007533_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0007533_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0007533_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0007533_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_20	phrog_2303	113.8	1.9e-33	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0007533_20	411461.DORFOR_00745	178.0	0	N/A	N/A
AcrCatalog	UHGV-0007533_20	cluster_74817	82.8	5.14e-22	NA	N/A
structural_annotation	UHGV-0007533_20	PF10788,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-0007533_21	K07584	63.9	3.2e-18	N/A	N/A
PHROG	UHGV-0007533_21	phrog_4478	84.6	7.9e-25	peptidase	other
UniRef90	UHGV-0007533_21	UniRef90_UPI00156D7F8B	173.0	0	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0007533_21	411461.DORFOR_00746	125.0	2.1e-36	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0007533_21	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0007533_21	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007533_21	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_22	phrog_872	84.1	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0007533_22	397290.C810_05225	110.0	1.7e-29	N/A	N/A
dbAPIS	UHGV-0007533_22	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_23	phrog_581	299.1	0	minor head protein	head and packaging
UniRef90	UHGV-0007533_23	UniRef90_A0A413B1A6	669.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0007533_23	742765.HMPREF9457_02121	335.0	0	N/A	N/A
Pfam	UHGV-0007533_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0007533_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007533_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_24	phrog_533	407.0	0	portal protein	head and packaging
UniRef90	UHGV-0007533_24	UniRef90_UPI001C0FB394	881.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0007533_24	411461.DORFOR_00749	637.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0007533_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0007533_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0007533_25	K06909	209.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0007533_25	phrog_10250	109.0	1.2e-32	N/A	unknown function
UniRef90	UHGV-0007533_25	UniRef90_UPI0018985A97	869.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0007533_25	411461.DORFOR_00750	747.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-0007533_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0007533_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0007533_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0007533_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0007533_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0007533_26	K07474	118.9	7.1e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0007533_26	phrog_2606	348.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-0007533_26	UniRef90_UPI001C0F93A3	504.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0007533_26	1304866.K413DRAFT_3033	322.0	0	terminase, small subunit	N/A
Pfam	UHGV-0007533_26	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0007533_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0007533_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0007533_26	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_28	phrog_36	52.9	0.0000000000000075	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007533_28	UniRef90_A0A416Q281	263.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0007533_28	1235792.C808_05326	181.0	0	N/A	N/A
structural_annotation	UHGV-0007533_28	PF02996	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007533_29	PF06257,COG4466	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_30	phrog_7566	109.6	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-0007533_30	693746.OBV_24070	77.4	8.12e-17	N/A	N/A
eggNOG-mapper	UHGV-0007533_31	1235798.C817_05493	84.7	1.57e-20	N/A	N/A
PHROG	UHGV-0007533_32	phrog_15077	64.0	2.2e-20	N/A	unknown function
UniRef90	UHGV-0007533_32	UniRef90_A0A174WLY0	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007533_32	1280698.AUJS01000007_gene1019	173.0	0	N/A	N/A
PHROG	UHGV-0007533_33	phrog_8470	206.9	0	N/A	unknown function
UniRef90	UHGV-0007533_33	UniRef90_UPI001158FAD9	429.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0007533_33	411902.CLOBOL_05697	477.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0007533_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0007533_33	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_34	phrog_4433	45.1	0.0000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0007533_34	411902.CLOBOL_05698	125.0	1.5e-33	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0007533_34	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0007533_34	PF12120,NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0007533_35	1280698.AUJS01000007_gene1016	133.0	1.61e-37	N/A	N/A
PHROG	UHGV-0007533_36	phrog_15768	198.8	0	N/A	unknown function
UniRef90	UHGV-0007533_36	UniRef90_R5GGJ0	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007533_36	693979.Bache_0304	97.8	1.06e-22	N/A	N/A
AcrCatalog	UHGV-0007533_36	cluster_38323	162.0	0	NA	N/A
Pfam	UHGV-0007533_36	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0007533_36	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_37	phrog_72	59.2	4.1e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0007533_37	411468.CLOSCI_00314	109.0	2.25e-27	N/A	N/A
structural_annotation	UHGV-0007533_37	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_38	phrog_659	47.6	0.00000000000021	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007533_38	UniRef90_UPI000E49F6EC	413.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007533_38	33035.JPJF01000135_gene5082	301.0	0	N/A	N/A
Pfam	UHGV-0007533_38	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0007533_38	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_41	phrog_6058	52.6	0.0000000000000054	N/A	unknown function
UniRef90	UHGV-0007533_41	UniRef90_A0A2V1JQ38	63.9	0.0000000000287	Glycogen synthase	N/A
eggNOG-mapper	UHGV-0007533_41	742733.HMPREF9469_05094	64.3	0.00000000000341	N/A	N/A
PHROG	UHGV-0007533_44	phrog_18248	53.1	0.0000000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007533_44	UniRef90_A0A173WPH2	120.0	4.4e-34	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-0007533_44	1589749.A0A0B5A036_9CAUD	64.3	0.0000000000376	sequence-specific DNA binding	N/A
PHROG	UHGV-0007533_45	phrog_8	70.2	1.2e-37	transcriptional regulator	transcription regulation
UniRef90	UHGV-0007533_45	UniRef90_UPI000E43199D	384.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0007533_45	411459.RUMOBE_00961	150.0	5.1848e-44	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0007533_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0007533_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0007533_45	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
PHROG	UHGV-0007533_46	phrog_87	97.8	7.6e-29	metallo-protease	other
UniRef90	UHGV-0007533_46	UniRef90_A0A413B155	275.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0007533_46	411459.RUMOBE_00962	182.0	0	Zn peptidase	N/A
Pfam	UHGV-0007533_46	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0007533_46	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0007533_46	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0007533_47	phrog_27136	164.9	0	N/A	unknown function
UniRef90	UHGV-0007533_47	UniRef90_UPI000A966D6C	348.0	0	Zn-ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0007533_47	1282664.H354_06486	150.0	1.38028e-42	Short C-terminal domain	N/A
KOfam	UHGV-0007533_48	K14059	90.6	2.6e-26	int; integrase	N/A
PHROG	UHGV-0007533_48	phrog_1	109.2	4.9e-32	integrase	integration and excision
UniRef90	UHGV-0007533_48	UniRef90_A0A6L8SXX0	584.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0007533_48	1235798.C817_04751	360.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0007533_48	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0007533_48	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A