UHGV-0008530 (vOTU-075091)

Viral Genome: UHGV-0008530

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0008530
vOTU ID	vOTU-075091
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_J_1_RAJ1015YZ__NODE_523_length_154302_cov_33.136307_1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	94.37 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9779
Viral Hallmark Genes (geNomad)	13
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	38
Jumbo Phage?	No

Genome Content
Length (bps)	33,241
GC Content	37.05%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	48
CDS Density	92%
Average CDS Length (bps)	636.00
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0008530_3	K07726	40.8	0.000000000018	K07726; putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0008530_3	397290.C810_01334	58.9	0.00000000563	N/A	N/A
Pfam	UHGV-0008530_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0008530_5	K01448	107.7	1.4e-31	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0008530_5	phrog_435	168.4	0	endolysin	lysis
UniRef90	UHGV-0008530_5	UniRef90_UPI00195E9D55	266.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0008530_5	552396.HMPREF0863_00263	197.0	0	hmm pf01520	N/A
Pfam	UHGV-0008530_5	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0008530_5	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-0008530_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0008530_5	PF01520,MF_00562,TIGR02883,COG0860,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_6	phrog_18218	116.1	1.5e-34	N/A	unknown function
UniRef90	UHGV-0008530_6	UniRef90_A0A3D0FFR6	79.0	1.07e-16	Ribonuclease	N/A
eggNOG-mapper	UHGV-0008530_6	742740.HMPREF9474_03173	92.8	5.32e-23	N/A	N/A
structural_annotation	UHGV-0008530_6	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008530_7	UniRef90_UPI001F485105	112.0	1.59e-30	branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0008530_7	1232453.BAIF02000013_gene3226	103.0	9.22e-28	N/A	N/A
KOfam	UHGV-0008530_8	K03651	46.1	0.0000000000007	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
Pfam	UHGV-0008530_8	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
PHROG	UHGV-0008530_9	phrog_1067	312.6	0	minor head protein	head and packaging
UniRef90	UHGV-0008530_9	UniRef90_A0A8G1TKQ2	471.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0008530_9	33035.JPJF01000023_gene3230	460.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0008530_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0008530_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0008530_9	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0008530_9	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_10	phrog_33	90.4	3.4e-26	distal tail protein Dit	tail
UniRef90	UHGV-0008530_10	UniRef90_UPI00189728CA	178.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0008530_10	1235798.C817_02569	197.0	0	tail component	N/A
NCBIFam	UHGV-0008530_10	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0008530_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0008530_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_11	phrog_1272	275.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0008530_11	UniRef90_A0A1Y4R6K5	406.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0008530_11	908340.HMPREF9406_2570	299.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0008530_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0008530_11	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0008530_11	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_14	phrog_88	88.5	7.6e-26	major tail protein	tail
UniRef90	UHGV-0008530_14	UniRef90_S0FUN2	143.0	5.15e-40	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0008530_14	1195236.CTER_5106	143.0	8.63999e-41	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0008530_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0008530_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008530_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_15	phrog_78	53.5	0.0000000000000042	tail terminator	connector
UniRef90	UHGV-0008530_15	UniRef90_UPI001BB8C064	84.0	1.33e-18	Phage tail protein	N/A
structural_annotation	UHGV-0008530_15	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008530_16	UniRef90_A0A829NR05	87.4	2.56e-19	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0008530_16	411459.RUMOBE_00932	84.0	6.58e-19	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0008530_16	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_17	phrog_25	63.6	3.3e-18	head closure Hc1	connector
UniRef90	UHGV-0008530_17	UniRef90_A0A845R2W2	104.0	1.15e-26	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0008530_17	508419.F8J165_9CAUD	54.7	0.0000000484	Phage head-tail joining protein	N/A
Pfam	UHGV-0008530_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0008530_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0008530_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_18	phrog_40	44.9	0.0000000000015	head-tail adaptor Ad1	connector
UniRef90	UHGV-0008530_18	UniRef90_UPI001BA8BAD6	104.0	3.64e-27	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0008530_18	508419.F8J164_9CAUD	91.3	9e-23	N/A	N/A
NCBIFam	UHGV-0008530_18	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0008530_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_20	phrog_10	216.7	0	major head protein	head and packaging
UniRef90	UHGV-0008530_20	UniRef90_A0A2G3DYR4	452.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0008530_20	796940.HMPREF9628_00144	247.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0008530_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0008530_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0008530_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0008530_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_21	K06904	79.8	4.4e-23	N/A	N/A
PHROG	UHGV-0008530_21	phrog_80	100.1	3.3e-29	head maturation protease	head and packaging
UniRef90	UHGV-0008530_21	UniRef90_UPI001BAAB6D6	201.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0008530_21	1196031.ALEG01000039_gene1815	156.0	1.4013e-45	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0008530_21	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0008530_21	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0008530_21	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_22	phrog_12	194.6	0	portal protein	head and packaging
UniRef90	UHGV-0008530_22	UniRef90_A0A238ZRD0	392.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0008530_22	397288.C806_00075	354.0	0	Portal protein	N/A
Pfam	UHGV-0008530_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0008530_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0008530_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0008530_22	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_23	phrog_9	245.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0008530_23	UniRef90_A0A3R6HK66	853.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0008530_23	1414720.CBYM010000002_gene575	682.0	0	Terminase	N/A
Pfam	UHGV-0008530_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0008530_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0008530_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0008530_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008530_24	UniRef90_A0A1C6JNN5	146.0	4.85003e-41	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0008530_24	1414720.CBYM010000002_gene576	147.0	2.78999e-42	N/A	N/A
structural_annotation	UHGV-0008530_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_25	phrog_144	71.1	1.5e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008530_25	UniRef90_A0A7G9G6Z8	162.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0008530_25	1304866.K413DRAFT_1217	157.0	0	HNH nucleases	N/A
Pfam	UHGV-0008530_25	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0008530_26	phrog_36	73.7	2.9e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0008530_26	UniRef90_A0A174EB71	103.0	9.11e-26	FliA/WhiG subfamily RNA polymerase sigma-28 subunit	N/A
eggNOG-mapper	UHGV-0008530_26	1123075.AUDP01000020_gene1515	92.4	5.78e-22	sigma factor activity	N/A
Pfam	UHGV-0008530_26	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0008530_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0008530_26	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_27	phrog_355	89.8	1.7e-26	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008530_27	UniRef90_A0A7M2RZV3	72.4	0.0000000000000699	N/A	N/A
eggNOG-mapper	UHGV-0008530_27	887929.HMP0721_1274	68.2	0.000000000000472	N/A	N/A
Pfam	UHGV-0008530_27	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0008530_27	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
UniRef90	UHGV-0008530_28	UniRef90_UPI001A5AAE47	146.0	2.83062e-43	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0008530_28	536227.CcarbDRAFT_5079	105.0	8.89e-28	HNH nucleases	N/A
COG	UHGV-0008530_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0008530_28	COG5126	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_32	K03427	119.8	2.3e-35	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0008530_32	phrog_6380	251.1	0	DNA methyltransferase	other
UniRef90	UHGV-0008530_32	UniRef90_A0A415L415	386.0	0	N6_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0008530_32	1095750.HMPREF9970_0172	265.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
PADLOC	UHGV-0008530_32	MTase_I_00005	96.9	5.2e-29	Type I methyltransferase	RM
Pfam	UHGV-0008530_32	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0008530_32	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0008530_32	PF02384,TIGR00497,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_33	K03427	46.6	0.00000000000043	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0008530_33	phrog_6380	147.6	7.84727e-44	DNA methyltransferase	other
UniRef90	UHGV-0008530_33	UniRef90_A0A417WG31	214.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0008530_33	1095750.HMPREF9970_0171	172.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-0008530_33	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0008530_33	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0008530_33	PF02475,MF_02217,NF000058,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_35	phrog_1071	140.1	4.99983e-42	DNA methyltransferase	other
UniRef90	UHGV-0008530_35	UniRef90_UPI0018AA2255	146.0	4.68e-38	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0008530_35	592010.GCWU000182_001448	143.0	3.96e-37	HsdM N-terminal domain	N/A
Pfam	UHGV-0008530_35	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0008530_35	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
COG	UHGV-0008530_35	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0008530_35	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_39	K03111	141.0	1.19993e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0008530_39	phrog_44	138.5	4.00001e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008530_39	UniRef90_A0A1C6JG26	234.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0008530_39	1408312.JNJS01000006_gene836	191.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0008530_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0008530_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0008530_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0008530_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0008530_39	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_40	phrog_15982	155.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0008530_40	411468.CLOSCI_01480	124.0	3.98e-29	N/A	N/A
Pfam	UHGV-0008530_40	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0008530_40	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0008530_40	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_41	phrog_3584	164.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0008530_41	742740.HMPREF9474_04323	197.0	0	N/A	N/A
structural_annotation	UHGV-0008530_41	PF11726	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_43	K08309	56.1	7.8e-16	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0008530_43	phrog_32437	106.0	1.6e-31	N/A	unknown function
UniRef90	UHGV-0008530_43	UniRef90_A0A1M6B783	121.0	3.48e-31	Transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0008530_43	411459.RUMOBE_01755	73.9	0.000000000000453	Transglycosylase SLT domain protein	N/A
Pfam	UHGV-0008530_43	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
structural_annotation	UHGV-0008530_43	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_46	K22300	74.7	1.8e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0008530_46	phrog_4	56.6	6.8e-16	transcriptional repressor	transcription regulation
UniRef90	UHGV-0008530_46	UniRef90_A0A1Q6KH79	159.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0008530_46	445972.ANACOL_03315	135.0	1.21e-39	N/A	N/A
Pfam	UHGV-0008530_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0008530_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0008530_46	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0008530_47	phrog_6600	41.5	0.000000000016	N/A	unknown function
UniRef90	UHGV-0008530_47	UniRef90_A0A374JQK3	78.6	0.0000000000000273	HIRAN domain-containing protein	N/A
eggNOG-mapper	UHGV-0008530_47	411471.SUBVAR_05817	70.1	0.0000000000142	N/A	N/A
structural_annotation	UHGV-0008530_47	PF08797	N/A	N/A	N/A	N/A
KOfam	UHGV-0008530_48	K14059	254.4	0	int; integrase	N/A
PHROG	UHGV-0008530_48	phrog_1	238.4	0	integrase	integration and excision
UniRef90	UHGV-0008530_48	UniRef90_A0A0M0AES7	480.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0008530_48	536233.CLO_0855	482.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-0008530_48	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0008530_48	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0008530_48	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0008530_48	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0008530_48	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A