UHGV-0008775 (vOTU-077062)

Viral Genome: UHGV-0008775

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0008775
vOTU ID	vOTU-077062
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_J_5_RAU1020YZ__NODE_1682_length_39198_cov_4.509803_1
Associated Biosample	SAMEA4969176
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	96.41 (High-quality)
Trimmed?	No
CheckV Viral Markers	22
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9776
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	66.33
Jumbo Phage?	No

Genome Content
Length (bps)	34,035
GC Content	45.90%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	45
CDS Density	95%
Average CDS Length (bps)	717.13
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0008775_1	UniRef90_A0A7C6IYQ7	307.0	0	Glycoside hydrolase family 5 protein	N/A
eggNOG-mapper	UHGV-0008775_1	1449050.JNLE01000003_gene2937	285.0	0	Cellulase (glycosyl hydrolase family 5)	N/A
Pfam	UHGV-0008775_1	PF00150	N/A	N/A	Cellulase (glycosyl hydrolase family 5)	Cellulase
COG	UHGV-0008775_1	COG2730	N/A	N/A	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	N/A
KOfam	UHGV-0008775_2	K06400	413.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0008775_2	phrog_95	423.2	0	integrase	integration and excision
UniRef90	UHGV-0008775_2	UniRef90_A0A3A6E4S5	369.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0008775_2	755731.Clo1100_0519	344.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0008775_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0008775_2	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0008775_2	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0008775_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0008775_2	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0008775_3	1462527.CCDM010000001_gene1872	84.3	0.00000000000000561	N/A	N/A
PHROG	UHGV-0008775_4	phrog_87	46.9	0.0000000000004	metallo-protease	other
UniRef90	UHGV-0008775_4	UniRef90_A0A3D1HDV6	189.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0008775_4	428125.CLOLEP_01867	102.0	1.22e-24	N/A	N/A
Pfam	UHGV-0008775_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
PHROG	UHGV-0008775_5	phrog_8	62.0	1.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0008775_5	UniRef90_A0A1Y4IVQ7	100.0	1.28e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0008775_5	742733.HMPREF9469_01855	73.9	0.0000000000000017	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0008775_5	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0008775_5	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0008775_5	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008775_6	UniRef90_A0A373XXU1	69.3	0.0000000000000496	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0008775_6	1007096.BAGW01000023_gene157	57.0	0.000000000611	N/A	N/A
structural_annotation	UHGV-0008775_6	TIGR03070	N/A	N/A	N/A	N/A
KOfam	UHGV-0008775_7	K07741	103.5	4.7e-30	antB; anti-repressor protein	N/A
PHROG	UHGV-0008775_7	phrog_130	274.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0008775_7	UniRef90_S4GKX3	386.0	0	BRO family protein	N/A
eggNOG-mapper	UHGV-0008775_7	397288.C806_04963	381.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0008775_7	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0008775_7	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0008775_7	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0008775_7	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0008775_8	UniRef90_A0A2X0XEB7	57.8	0.00000000207	N/A	N/A
eggNOG-mapper	UHGV-0008775_8	1347392.CCEZ01000005_gene1206	56.2	0.00000000128	N/A	N/A
structural_annotation	UHGV-0008775_8	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_15	phrog_1733	87.1	9.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0008775_15	1140002.I570_01471	105.0	2.05e-22	N/A	N/A
Pfam	UHGV-0008775_15	PF03118	N/A	N/A	Bacterial RNA polymerase, alpha chain C terminal domain	RNA_pol_A_CTD
PHROG	UHGV-0008775_16	phrog_253	116.5	5.2e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008775_16	UniRef90_UPI0019171ADA	149.0	6.51043e-42	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0008775_16	1236573.K4LRS9_9CAUD	68.9	0.00000000000422	Siphovirus Gp157	N/A
Pfam	UHGV-0008775_16	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0008775_16	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_17	phrog_2872	250.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008775_17	UniRef90_UPI001A9B3ECC	344.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0008775_17	754027.HMPREF9554_00709	219.0	0	N/A	N/A
Pfam	UHGV-0008775_17	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0008775_17	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0008775_18	K19789	319.2	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0008775_18	phrog_16	276.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008775_18	UniRef90_R6RJE0	612.0	0	DNA or RNA helicases of superfamily II	N/A
eggNOG-mapper	UHGV-0008775_18	1410670.JHXF01000015_gene2270	593.0	0	helicase	N/A
PADLOC	UHGV-0008775_18	mREase_IV_00005	113.0	5e-34	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0008775_18	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0008775_18	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0008775_18	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0008775_18	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_19	phrog_5702	91.0	5.2e-27	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008775_19	UniRef90_A0A348ZC81	139.0	5.63e-41	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0008775_19	1347392.CCEZ01000005_gene1219	126.0	1.42e-36	VRR_NUC	N/A
Pfam	UHGV-0008775_19	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0008775_19	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_20	phrog_378	121.6	6e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008775_20	UniRef90_UPI0006852132	157.0	2.8026e-45	N/A	N/A
eggNOG-mapper	UHGV-0008775_20	1410670.JHXF01000015_gene2272	157.0	0	N/A	N/A
Pfam	UHGV-0008775_20	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0008775_20	PF05037,NF004948	N/A	N/A	N/A	N/A
KOfam	UHGV-0008775_21	K06919	100.1	2.3e-29	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0008775_21	phrog_1829	796.9	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0008775_21	UniRef90_A0A6N4ALN1	868.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0008775_21	1347392.CCEZ01000005_gene1217	751.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0008775_21	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0008775_21	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0008775_21	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0008775_21	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0008775_21	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0008775_21	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008775_23	PF09953	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_24	phrog_25176	78.7	4.6e-25	N/A	unknown function
UniRef90	UHGV-0008775_24	UniRef90_UPI001BC93519	94.4	1.38e-20	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0008775_24	1450525.JATV01000019_gene2409	95.5	6.55e-23	N/A	N/A
PHROG	UHGV-0008775_25	phrog_36	57.1	3.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0008775_25	UniRef90_A0A4Z0XVP8	58.5	0.0000000423	RNA polymerase sigma factor SigO	N/A
eggNOG-mapper	UHGV-0008775_25	1401067.HMPREF0872_06835	52.0	0.00000201	N/A	N/A
Pfam	UHGV-0008775_25	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0008775_25	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_26	phrog_606	76.4	4.3e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0008775_26	UniRef90_UPI0004BAB6EB	172.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0008775_26	445972.ANACOL_01838	140.0	1.11e-40	DNA-packaging protein gp3	N/A
Pfam	UHGV-0008775_26	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0008775_26	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0008775_27	K06909	117.3	1.7e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0008775_27	phrog_2	100.6	2.6e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0008775_27	UniRef90_A0A0X8VAD6	562.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0008775_27	642492.Clole_0814	421.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0008775_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0008775_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0008775_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0008775_27	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_28	phrog_533	363.1	0	portal protein	head and packaging
UniRef90	UHGV-0008775_28	UniRef90_A0A349GP64	502.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0008775_28	1295642.H839_08289	312.0	0	portal protein	N/A
Pfam	UHGV-0008775_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0008775_28	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0008775_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_29	phrog_581	300.0	0	minor head protein	head and packaging
UniRef90	UHGV-0008775_29	UniRef90_A0A174ZWV0	370.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0008775_29	1295642.H839_08294	273.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0008775_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0008775_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008775_29	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_32	phrog_419	97.6	1.6e-28	N/A	unknown function
UniRef90	UHGV-0008775_32	UniRef90_A0A4U9RIR3	138.0	1.17e-40	N/A	N/A
eggNOG-mapper	UHGV-0008775_32	476272.RUMHYD_03324	120.0	2.46e-34	N/A	N/A
structural_annotation	UHGV-0008775_32	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_33	phrog_2303	107.0	1.3e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0008775_33	UniRef90_A0A0N7BTJ7	98.2	4.03e-22	N/A	N/A
eggNOG-mapper	UHGV-0008775_33	1280692.AUJL01000027_gene2161	119.0	3.92e-31	N/A	N/A
structural_annotation	UHGV-0008775_33	PF10788	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_34	phrog_267	67.8	2.4e-20	major head protein	head and packaging
UniRef90	UHGV-0008775_34	UniRef90_A0A1C6GMA6	452.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0008775_34	718252.FP2_06660	277.0	0	N/A	N/A
structural_annotation	UHGV-0008775_34	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_35	phrog_541	79.4	3.8e-23	head-tail adaptor	connector
UniRef90	UHGV-0008775_35	UniRef90_R5RS10	64.7	0.0000000000686	Protein gp8	N/A
eggNOG-mapper	UHGV-0008775_35	1231057.AMGD01000018_gene3617	77.4	1.44e-16	N/A	N/A
PHROG	UHGV-0008775_36	phrog_793	116.3	1.4e-34	head-tail adaptor	connector
UniRef90	UHGV-0008775_36	UniRef90_A0A174ZXQ8	85.1	3.1e-19	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0008775_36	997296.PB1_16194	68.9	0.000000000000115	Minor capsid protein	N/A
Pfam	UHGV-0008775_36	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0008775_36	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0008775_36	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_37	phrog_556	74.3	1.4e-21	minor head protein	head and packaging
UniRef90	UHGV-0008775_37	UniRef90_A0A355V0F3	117.0	8.19e-32	Minor capsid protein	N/A
Pfam	UHGV-0008775_37	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0008775_37	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_38	phrog_913	46.7	0.00000000000052	minor head protein	head and packaging
structural_annotation	UHGV-0008775_38	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_39	phrog_820	113.9	1e-33	major tail protein	tail
UniRef90	UHGV-0008775_39	UniRef90_A0A355UYH2	191.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0008775_39	935836.JAEL01000021_gene1488	108.0	3.4e-28	domain, Protein	N/A
COG	UHGV-0008775_39	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008775_39	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0008775_40	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_41	phrog_706	158.8	0	N/A	unknown function
UniRef90	UHGV-0008775_41	UniRef90_UPI0011DD2DB5	125.0	1.15e-32	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0008775_41	935836.JAEL01000086_gene44	122.0	5.27e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0008775_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0008775_41	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_42	phrog_1272	134.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0008775_42	552396.HMPREF0863_00269	198.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0008775_42	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0008775_42	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0008775_42	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0008775_42	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_43	phrog_33	51.9	0.000000000000019	distal tail protein Dit	tail
UniRef90	UHGV-0008775_43	UniRef90_A0A843FD70	78.2	0.000000000000367	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0008775_43	931626.Awo_c30940	69.3	0.0000000000851	Phage tail protein	N/A
COG	UHGV-0008775_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0008775_43	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0008775_44	phrog_538	81.8	2.1e-35	minor tail protein	tail
UniRef90	UHGV-0008775_44	UniRef90_UPI0006C06970	90.1	1.82e-16	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0008775_44	768704.Desmer_4453	85.9	8.46e-16	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0008775_44	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0008775_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A