UHGV-0010234 (vOTU-147582)

Viral Genome: UHGV-0010234

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0010234
vOTU ID	vOTU-147582
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-A-D_E_19_1056__NODE_2915_length_21414_cov_5.660683
Associated Biosample	SAMEA4765516
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	54.66 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9793
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	32.37
Jumbo Phage?	No

Genome Content
Length (bps)	21,414
GC Content	45.16%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	28
CDS Density	91%
Average CDS Length (bps)	696.32
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.66)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0010234_1	K04763	149.7	2.38221e-44	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0010234_1	phrog_1	125.1	7e-37	integrase	integration and excision
UniRef90	UHGV-0010234_1	UniRef90_A0A351URM1	231.0	0	Tyr recombinase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0010234_1	411468.CLOSCI_00297	178.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0010234_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0010234_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0010234_1	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0010234_3	K07474	101.7	1.3e-29	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0010234_3	phrog_2606	319.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0010234_3	UniRef90_UPI0015702ED4	379.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0010234_3	1304866.K413DRAFT_3033	228.0	0	terminase, small subunit	N/A
Pfam	UHGV-0010234_3	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0010234_3	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0010234_3	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0010234_3	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0010234_4	K06909	119.6	3.4e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0010234_4	phrog_2	152.7	2.8026e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0010234_4	UniRef90_A0A350VVC2	702.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0010234_4	1120998.AUFC01000030_gene2231	382.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0010234_4	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0010234_4	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0010234_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0010234_4	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_5	phrog_533	239.9	0	portal protein	head and packaging
UniRef90	UHGV-0010234_5	UniRef90_A0A3E3HWH0	604.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0010234_5	718252.FP2_06700	150.0	3.38e-37	N/A	N/A
structural_annotation	UHGV-0010234_5	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_6	phrog_581	280.3	0	minor head protein	head and packaging
UniRef90	UHGV-0010234_6	UniRef90_UPI00164C8416	358.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0010234_6	903814.ELI_3213	191.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0010234_6	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0010234_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010234_6	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_8	phrog_194	73.6	3.2e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-0010234_8	UniRef90_A0A173RNU4	249.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0010234_8	742765.HMPREF9457_02126	139.0	5.79e-39	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0010234_8	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0010234_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_9	phrog_422	211.0	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0010234_9	1123263.AUKY01000051_gene1080	265.0	0	N/A	N/A
structural_annotation	UHGV-0010234_9	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_11	phrog_541	73.3	2.8e-21	head-tail adaptor	connector
PHROG	UHGV-0010234_12	phrog_3366	122.4	2.2e-36	N/A	unknown function
Pfam	UHGV-0010234_12	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0010234_12	PF20536,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_13	phrog_556	74.3	1.3e-21	minor head protein	head and packaging
UniRef90	UHGV-0010234_13	UniRef90_A0A413QH49	81.3	2.1e-17	Capsid protein	N/A
eggNOG-mapper	UHGV-0010234_13	1449050.JNLE01000003_gene3886	70.1	0.000000000000163	N/A	N/A
Pfam	UHGV-0010234_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0010234_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_14	phrog_3266	71.3	1.1e-20	tail completion	connector
eggNOG-mapper	UHGV-0010234_14	1151292.QEW_4531	56.2	0.0000000445	N/A	N/A
structural_annotation	UHGV-0010234_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_15	phrog_3099	136.2	1.6e-40	N/A	unknown function
eggNOG-mapper	UHGV-0010234_15	397290.C810_05233	117.0	6.36e-31	N/A	N/A
structural_annotation	UHGV-0010234_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010234_16	1120746.CCNL01000014_gene2103	77.8	3.41e-16	N/A	N/A
PHROG	UHGV-0010234_17	phrog_706	134.1	7.6e-40	N/A	unknown function
UniRef90	UHGV-0010234_17	UniRef90_R7N4A5	172.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0010234_17	1235790.C805_00084	155.0	1.4013e-45	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0010234_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0010234_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_18	phrog_1535	128.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0010234_18	1298920.KI911353_gene2068	93.6	1.01e-16	domain protein	N/A
COG	UHGV-0010234_18	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_19	phrog_1194	72.1	5.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0010234_19	1235790.C805_00088	204.0	0	N/A	N/A
Pfam	UHGV-0010234_19	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0010234_19	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_20	phrog_18190	585.8	0	N/A	unknown function
UniRef90	UHGV-0010234_20	UniRef90_R7BGL9	425.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010234_20	1235790.C805_00089	379.0	0	N/A	N/A
structural_annotation	UHGV-0010234_20	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_22	phrog_17196	123.5	1.3e-36	kinase	other
eggNOG-mapper	UHGV-0010234_22	483218.BACPEC_01141	164.0	5.46506e-44	N/A	N/A
structural_annotation	UHGV-0010234_22	PF19537,PF13619,COG3536	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010234_23	1235793.C809_01950	54.7	0.0000056	Phage tail-collar fibre protein	N/A
COG	UHGV-0010234_23	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0010234_25	phrog_17180	63.3	2.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0010234_25	457424.BFAG_02437	60.1	0.00000000274	N/A	N/A
structural_annotation	UHGV-0010234_25	PF14282	N/A	N/A	N/A	N/A
PHROG	UHGV-0010234_26	phrog_1863	78.8	1.3e-23	N/A	unknown function
UniRef90	UHGV-0010234_26	UniRef90_UPI001F223E8B	117.0	7e-33	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0010234_26	1226322.HMPREF1545_04027	84.0	2.07e-20	N/A	N/A
PHROG	UHGV-0010234_27	phrog_1129	58.7	6.8e-17	holin	lysis
UniRef90	UHGV-0010234_27	UniRef90_A0A373K192	170.0	0	Holin	N/A
eggNOG-mapper	UHGV-0010234_27	33035.JPJF01000093_gene2233	127.0	2.73e-37	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0010234_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0010234_27	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0010234_28	K07273	168.5	0	acm; lysozyme	N/A
PHROG	UHGV-0010234_28	phrog_291	133.7	1.4e-39	endolysin	lysis
UniRef90	UHGV-0010234_28	UniRef90_A0A1Q6KJN7	226.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0010234_28	1235793.C809_01934	180.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0010234_28	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0010234_28	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0010234_28	PF01183,MF_02227,NF002576,COG3757	N/A	N/A	N/A	N/A