UHGV-0010478 (vOTU-013410)

Viral Genome: UHGV-0010478

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0010478
vOTU ID	vOTU-013410
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_B_3_THA0078JZ__NODE_346_length_72370_cov_9.350767_1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9763
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.72
Jumbo Phage?	No

Genome Content
Length (bps)	39,124
GC Content	47.55%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	58
CDS Density	91%
Average CDS Length (bps)	614.12
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0010478_1	phrog_918	131.9	1.3e-39	N/A	unknown function
UniRef90	UHGV-0010478_1	UniRef90_UPI00115A7D93	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010478_1	1140001.I571_01827	140.0	1.0804e-42	N/A	N/A
Pfam	UHGV-0010478_1	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0010478_1	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_2	phrog_355	56.9	3.3e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010478_2	UniRef90_A0A417BWH3	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010478_2	97138.C820_00250	120.0	6.19e-34	N/A	N/A
Pfam	UHGV-0010478_2	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0010478_2	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_3	phrog_199	56.0	4.6e-16	holin	lysis
UniRef90	UHGV-0010478_3	UniRef90_UPI00115C1583	301.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0010478_3	411460.RUMTOR_02100	160.0	0	N/A	N/A
Pfam	UHGV-0010478_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0010478_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0010478_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_4	phrog_19111	52.4	8.3e-22	N/A	unknown function
UniRef90	UHGV-0010478_4	UniRef90_UPI0011582918	558.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-0010478_4	1298920.KI911353_gene4836	117.0	4.06e-26	ATPase involved in DNA repair	N/A
Pfam	UHGV-0010478_4	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0010478_4	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
NCBIFam	UHGV-0010478_5	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0010478_5	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010478_6	742740.HMPREF9474_04291	105.0	2.08e-27	N/A	N/A
PHROG	UHGV-0010478_7	phrog_30004	42.9	0.000000000004	N/A	unknown function
COG	UHGV-0010478_7	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-0010478_9	411902.CLOBOL_00122	108.0	4.38e-28	N/A	N/A
PHROG	UHGV-0010478_10	phrog_18725	107.6	1.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0010478_10	742740.HMPREF9474_03517	197.0	0	N/A	N/A
PHROG	UHGV-0010478_11	phrog_13879	434.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0010478_11	742740.HMPREF9474_03516	997.0	0	N/A	N/A
structural_annotation	UHGV-0010478_11	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_12	phrog_1194	65.0	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0010478_12	1304866.K413DRAFT_0775	233.0	0	N/A	N/A
structural_annotation	UHGV-0010478_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_13	phrog_1535	441.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0010478_13	UniRef90_A0A174SV65	924.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0010478_13	742740.HMPREF9474_03514	736.0	0	tape measure	N/A
COG	UHGV-0010478_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0010478_13	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_14	phrog_8300	88.0	8.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0010478_14	742740.HMPREF9474_03512	109.0	4.98e-30	N/A	N/A
structural_annotation	UHGV-0010478_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_15	phrog_820	128.3	3.5e-38	major tail protein	tail
eggNOG-mapper	UHGV-0010478_15	742740.HMPREF9474_03511	245.0	0	domain, Protein	N/A
COG	UHGV-0010478_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010478_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_16	phrog_2595	85.1	7e-25	head-tail connector protein	connector
UniRef90	UHGV-0010478_16	UniRef90_UPI001D068DAC	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0010478_16	483218.BACPEC_01150	180.0	0	N/A	N/A
Pfam	UHGV-0010478_16	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0010478_16	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_17	phrog_556	62.4	6.9e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0010478_17	742740.HMPREF9474_03509	185.0	0	N/A	N/A
PHROG	UHGV-0010478_18	phrog_8710	139.4	9.39991e-42	N/A	unknown function
eggNOG-mapper	UHGV-0010478_18	742740.HMPREF9474_03508	186.0	0	N/A	N/A
structural_annotation	UHGV-0010478_18	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_19	phrog_541	88.1	8e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0010478_19	1304866.K413DRAFT_0783	203.0	0	N/A	N/A
PHROG	UHGV-0010478_20	phrog_1378	72.4	4.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0010478_20	1280692.AUJL01000027_gene2159	75.5	7.18e-17	N/A	N/A
PHROG	UHGV-0010478_21	phrog_422	341.7	0	major head protein	head and packaging
UniRef90	UHGV-0010478_21	UniRef90_A0A3R6PT58	519.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0010478_21	33035.JPJF01000093_gene2252	498.0	0	N/A	N/A
structural_annotation	UHGV-0010478_21	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_22	phrog_2303	154.7	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0010478_22	483218.BACPEC_01156	212.0	0	N/A	N/A
PHROG	UHGV-0010478_23	phrog_15041	79.0	3.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0010478_23	478749.BRYFOR_07608	55.1	0.00000000445	N/A	N/A
structural_annotation	UHGV-0010478_23	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_24	phrog_581	227.1	0	minor head protein	head and packaging
UniRef90	UHGV-0010478_24	UniRef90_UPI0009303339	730.0	0	putative zinc-binding metallopeptidase	N/A
eggNOG-mapper	UHGV-0010478_24	742740.HMPREF9474_03503	469.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0010478_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0010478_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0010478_24	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_25	phrog_25639	122.2	1.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-0010478_25	742740.HMPREF9474_03502	100.0	8.07e-27	N/A	N/A
PHROG	UHGV-0010478_26	phrog_533	290.0	0	portal protein	head and packaging
UniRef90	UHGV-0010478_26	UniRef90_A0A174WUZ7	779.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0010478_26	742740.HMPREF9474_03501	749.0	0	N/A	N/A
structural_annotation	UHGV-0010478_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0010478_27	K06909	86.6	3.3e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0010478_27	phrog_2	68.4	1.5e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0010478_27	UniRef90_A0A3R6QNE9	860.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0010478_27	1304866.K413DRAFT_0811	774.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0010478_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0010478_27	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0010478_28	K07474	142.0	6.8005e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0010478_28	phrog_51	154.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0010478_28	UniRef90_UPI001158F972	317.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0010478_28	1304866.K413DRAFT_0812	224.0	0	Terminase small subunit	N/A
Pfam	UHGV-0010478_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0010478_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0010478_28	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_29	phrog_36	45.9	0.0000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0010478_29	UniRef90_A0A3R6PH33	268.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0010478_29	742740.HMPREF9474_03497	157.0	0	N/A	N/A
structural_annotation	UHGV-0010478_29	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_30	phrog_23707	95.5	6.1e-28	N/A	unknown function
UniRef90	UHGV-0010478_30	UniRef90_A0A3A6L1C4	150.0	0	Alanine racemase	N/A
eggNOG-mapper	UHGV-0010478_30	411483.FAEPRAA2165_01889	78.2	7.19e-17	N/A	N/A
UniRef90	UHGV-0010478_32	UniRef90_UPI001F178C7B	110.0	3.07e-27	N/A	N/A
UniRef90	UHGV-0010478_34	UniRef90_A0A3A6KZJ8	272.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010478_34	1256908.HMPREF0373_00667	105.0	2.86e-27	N/A	N/A
Pfam	UHGV-0010478_34	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0010478_34	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_37	phrog_7566	80.1	1.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0010478_37	1235800.C819_00511	189.0	0	N/A	N/A
PHROG	UHGV-0010478_40	phrog_15077	77.0	4e-22	N/A	unknown function
UniRef90	UHGV-0010478_40	UniRef90_A0A174WLY0	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010478_40	1280698.AUJS01000007_gene1019	201.0	0	N/A	N/A
structural_annotation	UHGV-0010478_40	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_41	phrog_8470	225.7	0	N/A	unknown function
UniRef90	UHGV-0010478_41	UniRef90_UPI001158FAD9	869.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0010478_41	411902.CLOBOL_05697	567.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0010478_41	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0010478_41	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_42	phrog_4433	52.2	8.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0010478_42	411902.CLOBOL_05698	141.0	5.79e-40	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0010478_42	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0010478_42	PF12120,NF000066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010478_43	411902.CLOBOL_05699	192.0	0	N/A	N/A
KOfam	UHGV-0010478_44	K03733	173.6	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0010478_44	phrog_1	134.9	8.20001e-40	integrase	integration and excision
UniRef90	UHGV-0010478_44	UniRef90_UPI00115A577A	662.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0010478_44	742740.HMPREF9474_04312	293.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0010478_44	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0010478_44	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0010478_44	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0010478_44	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_45	phrog_3584	172.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0010478_45	610130.Closa_0713	285.0	0	N/A	N/A
PHROG	UHGV-0010478_50	phrog_18248	53.0	0.000000000000005	transcriptional regulator	transcription regulation
UniRef90	UHGV-0010478_50	UniRef90_UPI00115852EE	129.0	4.81e-38	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0010478_50	1201292.DR75_1541	67.8	0.0000000000000164	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0010478_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0010478_50	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0010478_51	K22300	42.9	0.0000000000091	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0010478_51	phrog_8	64.2	2.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0010478_51	UniRef90_A0A416L2Q1	231.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0010478_51	411460.RUMTOR_02056	134.0	2.13e-38	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0010478_51	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0010478_51	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0010478_51	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_52	phrog_87	92.8	2.6e-27	metallo-protease	other
UniRef90	UHGV-0010478_52	UniRef90_R5G840	268.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0010478_52	411460.RUMTOR_02055	179.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0010478_52	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0010478_52	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0010478_52	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010478_53	UniRef90_UPI001D0951D4	293.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0010478_53	1123263.AUKY01000072_gene2115	226.0	0	N/A	N/A
structural_annotation	UHGV-0010478_53	PF13424,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_54	phrog_7395	144.9	2.70451e-43	N/A	unknown function
UniRef90	UHGV-0010478_54	UniRef90_UPI0009F594E1	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010478_54	1236973.JCM9157_4386	119.0	2.72e-32	N/A	N/A
Pfam	UHGV-0010478_54	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-0010478_54	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
structural_annotation	UHGV-0010478_54	PF14015,NF033634	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_55	phrog_419	87.5	2.1e-27	N/A	unknown function
UniRef90	UHGV-0010478_55	UniRef90_UPI001E40EA70	111.0	4.18e-31	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0010478_55	203119.Cthe_2457	103.0	1.19e-28	N/A	N/A
structural_annotation	UHGV-0010478_55	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0010478_56	phrog_6988	136.2	1.10001e-40	N/A	unknown function
UniRef90	UHGV-0010478_56	UniRef90_R5FYF0	275.0	0	N/A	N/A
eggNOG-mapper	UHGV-0010478_56	1288298.rosmuc_04180	128.0	2.44e-36	N/A	N/A
PADLOC	UHGV-0010478_56	ThsB1_00002	49.1	0.00000000000015	TIR-like	Thoeris
Pfam	UHGV-0010478_56	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-0010478_56	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
KOfam	UHGV-0010478_57	K06400	288.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0010478_57	phrog_95	271.2	0	integrase	integration and excision
UniRef90	UHGV-0010478_57	UniRef90_R5FU90	936.0	0	Resolvase domain protein	N/A
eggNOG-mapper	UHGV-0010478_57	610130.Closa_2885	534.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0010478_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0010478_57	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0010478_57	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0010478_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0010478_57	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0010478_58	K06334	49.8	0.000000000000055	cotJC; spore coat protein JC	N/A
UniRef90	UHGV-0010478_58	UniRef90_R5FUX7	84.7	5.48e-21	Mn-containing catalase	N/A
eggNOG-mapper	UHGV-0010478_58	411902.CLOBOL_05715	71.6	3.2e-16	N/A	N/A
Pfam	UHGV-0010478_58	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-0010478_58	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A