UHGV-0015602 (vOTU-042791)

Viral Genome: UHGV-0015602

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0015602
vOTU ID	vOTU-042791
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_E_17_1727__NODE_2859_length_41666_cov_30.560148
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9819
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.74
Jumbo Phage?	No

Genome Content
Length (bps)	41,618
GC Content	58.59%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	57
CDS Density	95%
Average CDS Length (bps)	690.37
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0015602_1	phrog_27197	92.7	2.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0015602_1	394503.Ccel_3068	83.2	1.59e-18	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0015602_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0015602_2	phrog_599	49.5	0.000000000000098	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0015602_2	UniRef90_UPI000DCC136D	52.0	0.000000145	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0015602_2	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0015602_2	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0015602_2	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0015602_2	PF14354,NF007260	N/A	N/A	N/A	N/A
Pfam	UHGV-0015602_4	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0015602_6	phrog_3136	103.0	2.1e-30	N/A	unknown function
UniRef90	UHGV-0015602_6	UniRef90_A0A3D0HBD2	112.0	1.08e-28	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0015602_6	1235793.C809_02645	77.8	0.00000000000000387	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0015602_6	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0015602_6	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_10	phrog_474	103.9	2.6e-30	phosphofructokinase	other
UniRef90	UHGV-0015602_10	UniRef90_A0A2V2EHL9	127.0	1.65e-36	N/A	N/A
eggNOG-mapper	UHGV-0015602_10	428125.CLOLEP_01367	114.0	6.29e-32	N/A	N/A
Pfam	UHGV-0015602_10	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0015602_10	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0015602_11	K00571	95.4	3.3e-28	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0015602_11	phrog_67	88.0	5.7e-29	DNA methyltransferase	other
UniRef90	UHGV-0015602_11	UniRef90_UPI001E30CE28	252.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0015602_11	1268240.ATFI01000007_gene431	199.0	0	DNA methylase	N/A
PADLOC	UHGV-0015602_11	MTase_II_00172	97.4	2.2e-28	Type II methyltransferase	RM
Pfam	UHGV-0015602_11	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0015602_11	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0015602_11	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
Pfam	UHGV-0015602_13	PF00130	N/A	N/A	Phorbol esters/diacylglycerol binding domain (C1 domain)	C1_1
KOfam	UHGV-0015602_14	K03111	73.1	6.7e-21	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015602_14	phrog_44	78.2	1.7e-22	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015602_14	UniRef90_R5KNI9	79.0	2.09e-16	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015602_14	411473.RUMCAL_03263	75.9	0.00000000000000144	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0015602_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015602_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015602_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0015602_14	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_17	phrog_3584	150.7	8.40779e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0015602_17	1235792.C808_00060	78.6	0.0000000000000454	N/A	N/A
structural_annotation	UHGV-0015602_17	PF01446,NF041486	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015602_18	1226322.HMPREF1545_00288	64.3	0.0000000000038	N/A	N/A
structural_annotation	UHGV-0015602_19	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_20	phrog_12389	63.4	3.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0015602_20	693746.OBV_p-00550	63.2	0.000000000784	N/A	N/A
PHROG	UHGV-0015602_21	phrog_34845	51.5	0.000000000000014	N/A	unknown function
PHROG	UHGV-0015602_22	phrog_13890	84.7	6e-25	N/A	unknown function
UniRef90	UHGV-0015602_22	UniRef90_UPI001D06E573	83.6	1.16e-19	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-0015602_22	1378168.N510_00539	89.7	5.89e-23	N/A	N/A
structural_annotation	UHGV-0015602_22	PF03869,NF040976,COG4453	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_26	phrog_606	44.3	0.0000000000027	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0015602_26	1226322.HMPREF1545_03842	134.0	2.35e-37	DNA-packaging protein gp3	N/A
Pfam	UHGV-0015602_26	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0015602_26	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_27	phrog_2	96.9	4.4e-28	terminase large subunit	head and packaging
UniRef90	UHGV-0015602_27	UniRef90_G4KPW2	524.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0015602_27	693746.OBV_23980	524.0	0	phage Terminase large subunit	N/A
COG	UHGV-0015602_27	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0015602_27	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_28	phrog_30605	42.4	0.000000000011	N/A	unknown function
PHROG	UHGV-0015602_29	phrog_35275	126.0	1.9e-38	N/A	unknown function
eggNOG-mapper	UHGV-0015602_29	1519439.JPJG01000060_gene1888	127.0	1.11e-31	N/A	N/A
PHROG	UHGV-0015602_30	phrog_24113	162.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0015602_30	1226322.HMPREF1545_03847	153.0	0	N/A	N/A
structural_annotation	UHGV-0015602_30	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_31	phrog_371	143.5	1.49939e-42	major head protein	head and packaging
UniRef90	UHGV-0015602_31	UniRef90_R6TFU9	310.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0015602_31	1226322.HMPREF1545_03848	452.0	0	N/A	N/A
Pfam	UHGV-0015602_31	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0015602_31	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0015602_33	K19721	67.5	5.3e-20	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0015602_33	phrog_12105	110.1	7.8e-33	N/A	unknown function
eggNOG-mapper	UHGV-0015602_33	1226322.HMPREF1545_03850	103.0	1.24e-23	N/A	N/A
Pfam	UHGV-0015602_33	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-0015602_35	1519439.JPJG01000060_gene1895	110.0	5.24e-28	N/A	N/A
structural_annotation	UHGV-0015602_35	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_37	phrog_1863	63.9	2.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0015602_37	1226322.HMPREF1545_04027	106.0	2.04e-29	N/A	N/A
PHROG	UHGV-0015602_38	phrog_443	54.7	0.000000000000003	holin	lysis
UniRef90	UHGV-0015602_38	UniRef90_UPI0009B98E42	97.4	2.58e-25	holin	N/A
eggNOG-mapper	UHGV-0015602_38	1235800.C819_01425	91.7	1.33e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0015602_38	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0015602_38	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_39	phrog_21825	112.1	5.8e-33	endolysin	lysis
UniRef90	UHGV-0015602_39	UniRef90_UPI001959E69A	192.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0015602_39	693746.OBV_19030	165.0	0	CHAP domain	N/A
Pfam	UHGV-0015602_39	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0015602_39	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0015602_39	PF00877,TIGR02594,COG0791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015602_40	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_41	phrog_511	247.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0015602_41	1226322.HMPREF1545_00785	583.0	0	N/A	N/A
structural_annotation	UHGV-0015602_41	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_42	phrog_156	284.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0015602_42	1519439.JPJG01000060_gene1886	657.0	0	N/A	N/A
structural_annotation	UHGV-0015602_42	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_43	phrog_1899	55.8	1.9e-16	N/A	unknown function
UniRef90	UHGV-0015602_43	UniRef90_UPI00110693DB	187.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0015602_43	1226322.HMPREF1545_00783	100.0	6.51e-21	Chaperone of endosialidase	N/A
Pfam	UHGV-0015602_43	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-0015602_43	TIGR01643.1	N/A	N/A	YD repeat-containing protein	N/A
structural_annotation	UHGV-0015602_43	PF07902,NF041249	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015602_44	1226322.HMPREF1545_00786	160.0	1.52999e-40	N/A	N/A
PHROG	UHGV-0015602_45	phrog_22978	96.6	3.80004e-41	N/A	unknown function
UniRef90	UHGV-0015602_45	UniRef90_A0A1Y3SMK5	1199.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0015602_45	693746.OBV_23800	729.0	0	N/A	N/A
Pfam	UHGV-0015602_45	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
Pfam	UHGV-0015602_45	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
KOfam	UHGV-0015602_46	K14059	133.9	1.9e-39	int; integrase	N/A
PHROG	UHGV-0015602_46	phrog_1	146.1	3.19496e-43	integrase	integration and excision
UniRef90	UHGV-0015602_46	UniRef90_A0A1C5W824	386.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0015602_46	693746.OBV_41260	261.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0015602_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0015602_46	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0015602_46	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015602_47	479437.Elen_0688	63.5	0.0000000114	competence protein COMEC	N/A
COG	UHGV-0015602_47	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0015602_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0015602_48	PF13560,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0015602_50	K22300	61.7	1.7e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0015602_50	phrog_8	65.6	1.1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015602_50	UniRef90_A0A367GBC1	87.8	6.65e-20	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0015602_50	552396.HMPREF0863_00301	78.2	5.31e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0015602_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0015602_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0015602_50	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015602_51	UniRef90_L7VHB2	85.5	1.13e-20	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0015602_51	1121335.Clst_0370	85.5	1.89e-21	N/A	N/A
Pfam	UHGV-0015602_51	PF02954	N/A	N/A	Bacterial regulatory protein, Fis family	HTH_8
structural_annotation	UHGV-0015602_51	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0015602_52	PF11112,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_53	phrog_7566	96.2	1.8e-28	N/A	unknown function
UniRef90	UHGV-0015602_53	UniRef90_A0A8D9UHC0	123.0	1.63e-34	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0015602_53	693746.OBV_24070	134.0	2.8e-39	N/A	N/A
KOfam	UHGV-0015602_54	K03111	117.6	1.8e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015602_54	phrog_44	132.5	2.9e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015602_54	UniRef90_UPI001106EC6F	151.0	8.40779e-45	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015602_54	1007096.BAGW01000023_gene151	142.0	6.38011e-42	Single-strand binding protein family	N/A
Pfam	UHGV-0015602_54	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015602_54	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015602_54	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0015602_54	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0015602_54	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_55	phrog_25245	55.2	9e-16	N/A	unknown function
UniRef90	UHGV-0015602_55	UniRef90_A0A3D5UFN2	85.1	1.06e-17	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0015602_55	657322.FPR_26620	70.9	0.000000000000313	3D domain	N/A
COG	UHGV-0015602_55	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0015602_55	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0015602_57	phrog_4433	200.9	0	N/A	unknown function
UniRef90	UHGV-0015602_57	UniRef90_UPI00045B9709	105.0	8.93e-25	collagen-like protein	N/A
eggNOG-mapper	UHGV-0015602_57	645991.Sgly_0315	128.0	7.02e-33	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-0015602_57	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0015602_57	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0015602_57	PF11259,NF000318	N/A	N/A	N/A	N/A