UHGV-0016755 (vOTU-042897)

Viral Genome: UHGV-0016755

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0016755
vOTU ID	vOTU-042897
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_A_12_1819__NODE_1094_length_45007_cov_32.442933
Associated Biosample	SAMEA4766056
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9716
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.81
Jumbo Phage?	No

Genome Content
Length (bps)	44,930
GC Content	54.48%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	78
CDS Density	91%
Average CDS Length (bps)	523.92
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0016755_1	phrog_38	131.0	8.8e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0016755_1	UniRef90_A0A8D9PG33	278.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0016755_1	1232453.BAIF02000058_gene1623	357.0	0	TIGRFAM Phage	N/A
COG	UHGV-0016755_1	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016755_1	PF17289,MF_04147,NF033889,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_2	phrog_64	169.8	0	portal protein	head and packaging
UniRef90	UHGV-0016755_2	UniRef90_A0A7X9GQD9	383.0	0	Phage portal protein (Fragment)	N/A
eggNOG-mapper	UHGV-0016755_2	1121866.AUGK01000003_gene1429	340.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0016755_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0016755_2	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016755_4	UniRef90_A0A7C7EK05	65.1	0.000000000991	N/A	N/A
Pfam	UHGV-0016755_4	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0016755_4	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_5	phrog_247	231.7	0	major head protein	head and packaging
UniRef90	UHGV-0016755_5	UniRef90_UPI000A1C9CC1	431.0	0	coat protein	N/A
eggNOG-mapper	UHGV-0016755_5	903814.ELI_3208	440.0	0	N/A	N/A
structural_annotation	UHGV-0016755_5	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016755_6	UniRef90_R6N215	71.6	0.0000000000000549	Phage QLRG family putative DNA packaging	N/A
Pfam	UHGV-0016755_6	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0016755_6	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016755_7	1121866.AUGK01000003_gene1432	72.0	0.0000000000000181	N/A	N/A
structural_annotation	UHGV-0016755_9	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_10	phrog_158	58.4	1.5e-16	major tail protein	tail
eggNOG-mapper	UHGV-0016755_10	1121333.JMLH01000047_gene1013	121.0	4.03e-33	N/A	N/A
Pfam	UHGV-0016755_10	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0016755_10	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_13	phrog_1535	110.3	5.1e-39	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0016755_13	1121866.AUGK01000003_gene1437	192.0	0	phage tail tape measure protein	N/A
COG	UHGV-0016755_13	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0016755_14	phrog_1194	70.4	2.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0016755_14	411902.CLOBOL_00125	103.0	1.4e-26	N/A	N/A
structural_annotation	UHGV-0016755_14	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_15	phrog_13879	193.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0016755_15	411902.CLOBOL_00124	305.0	0	N/A	N/A
structural_annotation	UHGV-0016755_15	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_16	phrog_18725	48.2	0.00000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0016755_16	1226322.HMPREF1545_00062	53.5	0.00000128	N/A	N/A
PHROG	UHGV-0016755_19	phrog_18593	127.9	5.9e-38	N/A	unknown function
UniRef90	UHGV-0016755_19	UniRef90_A0A2Y9CAD1	172.0	0	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0016755_19	411460.RUMTOR_02099	139.0	4.47e-39	N/A	N/A
Pfam	UHGV-0016755_19	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0016755_20	phrog_4105	74.2	1.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0016755_20	397288.C806_00056	86.7	1.35e-20	N/A	N/A
KOfam	UHGV-0016755_21	K19470	44.8	0.0000000000015	C1QTNF1_6_8; complement C1q tumor necrosis factor-related protein 1/6/8	N/A
PHROG	UHGV-0016755_21	phrog_5073	47.6	0.00000000000014	tail fiber protein	tail
Pfam	UHGV-0016755_21	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0016755_23	K07273	159.8	0	acm; lysozyme	N/A
PHROG	UHGV-0016755_23	phrog_291	132.8	3.4e-39	endolysin	lysis
UniRef90	UHGV-0016755_23	UniRef90_A0A174NZH9	89.7	1.39e-17	Lysozyme M1	N/A
eggNOG-mapper	UHGV-0016755_23	877420.ATVW01000046_gene2306	92.8	4.99e-19	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0016755_23	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0016755_23	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0016755_23	PF01183,MF_02227,TIGR04303,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_24	phrog_918	120.4	5.1e-36	N/A	unknown function
UniRef90	UHGV-0016755_24	UniRef90_UPI001C8E3542	134.0	1.63e-39	N/A	N/A
eggNOG-mapper	UHGV-0016755_24	469618.FVAG_01307	126.0	4.36e-37	N/A	N/A
Pfam	UHGV-0016755_24	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0016755_24	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_25	phrog_6918	58.4	1e-16	holin	lysis
UniRef90	UHGV-0016755_25	UniRef90_G9YP36	55.8	0.000000112	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-0016755_25	1226322.HMPREF1545_03575	57.4	0.00000000606	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0016755_25	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0016755_25	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016755_26	UniRef90_A0A843IZ65	68.6	0.0000000000000958	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-0016755_26	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016755_29	PF02255,TIGR00823,COG1447	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016755_31	UniRef90_A0A1Q9JGI6	127.0	7.62e-35	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016755_31	1033733.CAEK01000007_gene1628	109.0	1.24e-28	N/A	N/A
structural_annotation	UHGV-0016755_31	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
KOfam	UHGV-0016755_32	K14059	187.2	0	int; integrase	N/A
PHROG	UHGV-0016755_32	phrog_1	159.5	0	integrase	integration and excision
UniRef90	UHGV-0016755_32	UniRef90_UPI001EDE32BF	246.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0016755_32	1226322.HMPREF1545_00144	211.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0016755_32	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0016755_32	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0016755_32	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0016755_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0016755_34	phrog_5319	61.8	6.1e-18	outer membrane protein	other
UniRef90	UHGV-0016755_34	UniRef90_A0A1Q6JN93	137.0	8.93e-36	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016755_34	471855.Shel_11450	95.5	4.64e-20	sh3 domain protein	N/A
COG	UHGV-0016755_34	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016755_34	PF03843,PF12773,MF_00984,TIGR00752,COG3065	N/A	N/A	N/A	N/A
COG	UHGV-0016755_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0016755_35	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-0016755_41	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
Pfam	UHGV-0016755_41	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
dbAPIS	UHGV-0016755_41	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
PHROG	UHGV-0016755_44	phrog_474	117.8	1.2e-34	phosphofructokinase	other
UniRef90	UHGV-0016755_44	UniRef90_UPI001D0B8E43	97.4	5.22e-23	N/A	N/A
eggNOG-mapper	UHGV-0016755_44	428125.CLOLEP_01367	103.0	2.52e-26	N/A	N/A
Pfam	UHGV-0016755_44	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0016755_44	PF19905	N/A	N/A	N/A	N/A
Pfam	UHGV-0016755_46	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
PHROG	UHGV-0016755_47	phrog_24490	55.6	6.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0016755_47	1232428.CAVO010000067_gene435	59.7	0.000000000356	N/A	N/A
PHROG	UHGV-0016755_49	phrog_2245	40.1	0.000000000044	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-0016755_50	COG3460	N/A	N/A	N/A	N/A
Pfam	UHGV-0016755_53	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0016755_55	phrog_1374	67.9	1e-19	N/A	unknown function
UniRef90	UHGV-0016755_55	UniRef90_A0A8F5MGK2	72.8	0.00000000000000132	Membrane protein	N/A
eggNOG-mapper	UHGV-0016755_55	445972.ANACOL_03351	66.2	0.000000000000136	N/A	N/A
Pfam	UHGV-0016755_55	PF10269	N/A	N/A	Transmembrane Fragile-X-F protein	Tmemb_185A
KOfam	UHGV-0016755_64	K10906	87.4	8.6e-30	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0016755_64	phrog_412	235.0	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016755_64	UniRef90_A0A1C6GFL6	240.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-0016755_64	1454004.AW11_02382	187.0	0	N/A	N/A
Pfam	UHGV-0016755_64	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0016755_64	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0016755_64	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_66	phrog_561	149.1	2.8026e-44	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016755_66	UniRef90_UPI001EE8E2AA	222.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0016755_66	887325.HMPREF0381_0098	192.0	0	N/A	N/A
Pfam	UHGV-0016755_66	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0016755_66	PF03837,TIGR01913	N/A	N/A	N/A	N/A
KOfam	UHGV-0016755_67	K03111	117.6	1.7e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0016755_67	phrog_44	124.0	1.2e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016755_67	UniRef90_A0A2U1BEJ1	132.0	7.33e-37	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0016755_67	748224.HMPREF9436_00638	103.0	3.05e-26	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0016755_67	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0016755_67	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0016755_67	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0016755_67	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0016755_67	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_68	phrog_1233	68.0	1.4e-19	N/A	unknown function
UniRef90	UHGV-0016755_68	UniRef90_UPI0013ED6412	58.2	0.00000000599	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0016755_68	218284.CCDN010000001_gene857	58.9	0.000000000468	N/A	N/A
structural_annotation	UHGV-0016755_68	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_69	phrog_3490	123.4	1.6e-36	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016755_69	UniRef90_A0A1C6FNL5	161.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016755_69	357809.Cphy_2986	144.0	8.66002e-42	N/A	N/A
Pfam	UHGV-0016755_69	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0016755_69	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0016755_70	K02316	74.4	1.6e-21	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0016755_70	phrog_11992	89.9	4e-26	N/A	unknown function
UniRef90	UHGV-0016755_70	UniRef90_UPI00102F4626	97.8	2.15e-22	CHC2 zinc finger domain-containing protein	N/A
eggNOG-mapper	UHGV-0016755_70	397287.C807_01195	81.6	1.7e-16	CHC2 zinc finger	N/A
PADLOC	UHGV-0016755_70	drt-cluster192	46.8	0.00000000000052	DRT	DRT
Pfam	UHGV-0016755_70	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0016755_70	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0016755_70	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_71	phrog_8841	458.2	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016755_71	UniRef90_UPI0016512652	473.0	0	N/A	N/A
eggNOG-mapper	UHGV-0016755_71	742738.HMPREF9460_02495	386.0	0	N/A	N/A
Pfam	UHGV-0016755_71	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0016755_71	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0016755_71	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016755_71	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016755_72	UniRef90_UPI001D07B715	92.0	2.57e-19	DNA-packaging protein	N/A
structural_annotation	UHGV-0016755_72	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0016755_77	K06400	213.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0016755_77	phrog_95	204.9	0	integrase	integration and excision
UniRef90	UHGV-0016755_77	UniRef90_A0A1C6EX67	319.0	0	Transposon Tn3 resolvase	N/A
eggNOG-mapper	UHGV-0016755_77	697329.Rumal_3466	303.0	0	resolvase	N/A
Pfam	UHGV-0016755_77	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0016755_77	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0016755_77	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0016755_77	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0016755_78	phrog_4758	42.4	0.0000000000065	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-0016755_78	1121866.AUGK01000003_gene1428	125.0	5.02e-30	chromosome segregation	N/A
COG	UHGV-0016755_78	COG5410	N/A	N/A	N/A	N/A