UHGV-0017172 (vOTU-170681)

Viral Genome: UHGV-0017172

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0017172
vOTU ID	vOTU-170681
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-A-D_O_6_1198__NODE_1729_length_45381_cov_13.931286
Associated Biosample	SAMEA4765657
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	61.24 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9788
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	14.35
Jumbo Phage?	No

Genome Content
Length (bps)	45,381
GC Content	43.29%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	61
CDS Density	90%
Average CDS Length (bps)	672.54
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0017172_1	K14059	77.8	1.9e-22	int; integrase	N/A
PHROG	UHGV-0017172_1	phrog_1	109.0	5.2e-32	integrase	integration and excision
UniRef90	UHGV-0017172_1	UniRef90_A0A6A7UPL7	563.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0017172_1	272559.BF9343_2363	293.0	0	Phage integrase SAM-like domain	N/A
Pfam	UHGV-0017172_1	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-0017172_1	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-0017172_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0017172_1	PF17293,PF13102,PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017172_2	UniRef90_A0A6A7W0G9	595.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017172_2	445970.ALIPUT_02650	384.0	0	N/A	N/A
structural_annotation	UHGV-0017172_2	PF12987	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017172_7	UniRef90_A0A8D9PFB4	80.1	1.06e-16	Peptidase M76 family	N/A
eggNOG-mapper	UHGV-0017172_7	762982.HMPREF9442_01206	83.2	1.03e-18	N/A	N/A
PHROG	UHGV-0017172_8	phrog_38431	153.4	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0017172_8	UniRef90_R5U340	156.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0017172_8	411901.BACCAC_01108	153.0	0	N/A	N/A
PHROG	UHGV-0017172_10	phrog_28898	89.8	3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0017172_10	411901.BACCAC_01110	152.0	8.40779e-45	N/A	N/A
structural_annotation	UHGV-0017172_10	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_11	phrog_31654	93.1	2.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0017172_11	742725.HMPREF9450_02106	166.0	0	N/A	N/A
PHROG	UHGV-0017172_12	phrog_16490	156.9	0	N/A	unknown function
UniRef90	UHGV-0017172_12	UniRef90_A0A8F1B6F8	177.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0017172_12	742725.HMPREF9450_02105	234.0	0	N/A	N/A
UniRef90	UHGV-0017172_13	UniRef90_A0A413BQD9	156.0	0	DNA-binding protein	N/A
structural_annotation	UHGV-0017172_13	PF05930,NF033499,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_15	phrog_32423	49.3	0.000000000000077	N/A	unknown function
eggNOG-mapper	UHGV-0017172_15	411479.BACUNI_00731	88.2	4.16e-21	N/A	N/A
PHROG	UHGV-0017172_16	phrog_26448	68.7	2.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0017172_16	1227276.HMPREF9148_00148	75.5	0.00000000000000493	N/A	N/A
Pfam	UHGV-0017172_16	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-0017172_16	PF20647	N/A	N/A	N/A	N/A
KOfam	UHGV-0017172_17	K03791	210.7	0	K03791; putative chitinase	N/A
PHROG	UHGV-0017172_17	phrog_181	171.2	0	endolysin	lysis
UniRef90	UHGV-0017172_17	UniRef90_A0A413BQK3	175.0	0	Glycoside hydrolase family 19 protein	N/A
eggNOG-mapper	UHGV-0017172_17	748280.NH8B_1968	162.0	0	Chitinase class I	N/A
Pfam	UHGV-0017172_17	PF00182	N/A	N/A	Chitinase class I	Glyco_hydro_19
COG	UHGV-0017172_17	COG3179	N/A	N/A	Chitinase, GH19 family	N/A
structural_annotation	UHGV-0017172_17	PF00182,TIGR02282,COG3179	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_18	phrog_15610	139.4	6.50062e-42	protease	other
eggNOG-mapper	UHGV-0017172_18	1347393.HG726024_gene2889	125.0	3.42e-36	N/A	N/A
eggNOG-mapper	UHGV-0017172_20	537007.BLAHAN_05239	101.0	1.28e-20	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0017172_20	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0017172_20	PF20010	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017172_22	PF20942,NF033814,COG5456	N/A	N/A	N/A	N/A
KOfam	UHGV-0017172_23	K08131	57.3	9.5e-17	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-0017172_23	phrog_17422	296.4	0	N/A	unknown function
UniRef90	UHGV-0017172_23	UniRef90_UPI001C019237	424.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0017172_23	357276.EL88_22735	548.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0017172_23	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0017172_23	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0017172_24	phrog_6305	106.2	3.4e-31	tail protein	tail
eggNOG-mapper	UHGV-0017172_24	411901.BACCAC_01133	157.0	0	N/A	N/A
structural_annotation	UHGV-0017172_24	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0017172_25	K20478	79.4	6.4e-24	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0017172_25	phrog_14295	536.8	0	N/A	unknown function
UniRef90	UHGV-0017172_25	UniRef90_UPI001C452B56	1850.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0017172_25	457424.BFAG_03298	513.0	0	protein involved in control of spindle dynamics together with kar3p K00870	N/A
Pfam	UHGV-0017172_25	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-0017172_25	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0017172_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_26	phrog_11996	201.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0017172_26	679189.HMPREF9019_0964	217.0	0	N/A	N/A
structural_annotation	UHGV-0017172_26	PF06894,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_27	phrog_17745	128.8	3.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-0017172_27	679189.HMPREF9019_0963	102.0	5e-25	N/A	N/A
structural_annotation	UHGV-0017172_27	PF06199,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_28	phrog_5597	93.4	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0017172_28	886379.AEWI01000001_gene1733	54.7	0.000000121	N/A	N/A
structural_annotation	UHGV-0017172_28	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_29	phrog_5377	120.7	7.3e-36	N/A	unknown function
UniRef90	UHGV-0017172_29	UniRef90_UPI001897E37F	129.0	1.57e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0017172_29	679189.HMPREF9019_0962	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017172_30	411901.BACCAC_01141	96.3	1.98e-24	N/A	N/A
structural_annotation	UHGV-0017172_30	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017172_31	411901.BACCAC_01142	132.0	1.15e-38	N/A	N/A
structural_annotation	UHGV-0017172_31	PF20449	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_32	phrog_29	174.0	0	major head protein	head and packaging
UniRef90	UHGV-0017172_32	UniRef90_UPI000D0FF18B	413.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0017172_32	411901.BACCAC_01143	326.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0017172_32	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0017172_32	PF03864,MF_04133,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_33	phrog_38330	122.3	1.8e-36	N/A	unknown function
eggNOG-mapper	UHGV-0017172_33	411901.BACCAC_01144	148.0	1.96182e-44	N/A	N/A
structural_annotation	UHGV-0017172_33	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_34	phrog_5824	98.0	1e-28	N/A	unknown function
PHROG	UHGV-0017172_35	phrog_323	64.1	2.7e-18	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017172_35	UniRef90_UPI000686C66A	52.4	0.00000536	HNH endonuclease	N/A
structural_annotation	UHGV-0017172_35	PF13936,PF13613,NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-0017172_37	K24451	357.6	0	zim; modification methylase	N/A
PHROG	UHGV-0017172_37	phrog_67	118.4	5.7e-35	DNA methyltransferase	other
UniRef90	UHGV-0017172_37	UniRef90_UPI001F3BA0C8	394.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0017172_37	457424.BFAG_04701	394.0	0	DNA methylase	N/A
PADLOC	UHGV-0017172_37	MTase_II_00069	433.3	0	Type II methyltransferase	RM
Pfam	UHGV-0017172_37	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0017172_37	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0017172_37	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_38	phrog_419	112.3	4.4e-33	N/A	unknown function
UniRef90	UHGV-0017172_38	UniRef90_A0A0E2BM07	114.0	8.46e-31	N/A	N/A
eggNOG-mapper	UHGV-0017172_38	665959.HMPREF1013_05319	106.0	6.22e-29	N/A	N/A
structural_annotation	UHGV-0017172_38	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_42	phrog_32732	66.0	4.6e-19	N/A	unknown function
UniRef90	UHGV-0017172_42	UniRef90_UPI001F1A0D8B	155.0	1.12104e-44	N/A	N/A
eggNOG-mapper	UHGV-0017172_42	762982.HMPREF9442_01182	115.0	7.93e-30	N/A	N/A
dbAPIS	UHGV-0017172_42	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_44	phrog_874	87.7	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0017172_44	762968.HMPREF9441_00541	160.0	0	N/A	N/A
structural_annotation	UHGV-0017172_44	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017172_46	UniRef90_A0A6I1RX08	69.7	0.000000000000391	N/A	N/A
Pfam	UHGV-0017172_46	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0017172_50	PF13969	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017172_52	UniRef90_A0A098GES5	85.9	8.48e-20	Putative phage associated protein	N/A
structural_annotation	UHGV-0017172_52	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-0017172_57	K03555	111.5	2.2e-33	mutS; DNA mismatch repair protein MutS	N/A
PHROG	UHGV-0017172_57	phrog_8439	79.2	3.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0017172_57	1127696.HMPREF9134_00003	122.0	6.16e-29	that it carries out the mismatch recognition step. This protein has a weak ATPase activity	N/A
Pfam	UHGV-0017172_57	PF01624	N/A	N/A	MutS domain I	MutS_I
COG	UHGV-0017172_57	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
structural_annotation	UHGV-0017172_57	PF01624	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_58	phrog_64	153.7	1.4013e-45	portal protein	head and packaging
UniRef90	UHGV-0017172_58	UniRef90_A0A6A7USY4	835.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0017172_58	411901.BACCAC_01152	537.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0017172_58	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0017172_58	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0017172_59	phrog_7625	247.0	0	head morphogenesis	head and packaging
UniRef90	UHGV-0017172_59	UniRef90_UPI000D0F347D	303.0	0	ADP-ribosyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-0017172_59	411901.BACCAC_01148	298.0	0	N/A	N/A
structural_annotation	UHGV-0017172_59	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017172_60	UniRef90_A0A6A7UVT1	417.0	0	ANT domain-containing protein	N/A
eggNOG-mapper	UHGV-0017172_60	1121100.JCM6294_587	58.9	0.000000072	BRO family, N-terminal domain	N/A
Pfam	UHGV-0017172_60	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0017172_60	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0017172_60	COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017172_61	UniRef90_UPI0018F28121	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017172_61	226186.BT_4516	208.0	0	N/A	N/A
Pfam	UHGV-0017172_61	PF07510	N/A	N/A	N/A	DUF1524
COG	UHGV-0017172_61	COG1479	N/A	N/A	N/A	N/A