UHGV-0019551 (vOTU-043130)

Viral Genome: UHGV-0019551

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0019551
vOTU ID	vOTU-043130
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_A_12_1819__NODE_1250_length_41617_cov_23.495835
Associated Biosample	SAMEA4766056
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9728
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.44
Jumbo Phage?	No

Genome Content
Length (bps)	41,540
GC Content	40.50%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	73
CDS Density	93%
Average CDS Length (bps)	526.69
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0019551_1	phrog_443	57.3	4.4e-16	holin	lysis
UniRef90	UHGV-0019551_1	UniRef90_UPI0002E2AC7F	87.8	1.34e-21	holin	N/A
eggNOG-mapper	UHGV-0019551_1	610130.Closa_4157	80.9	1.31e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0019551_1	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0019551_1	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_2	phrog_21718	63.0	4.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0019551_2	476272.RUMHYD_01768	57.8	0.0000000103	N/A	N/A
PHROG	UHGV-0019551_4	phrog_16490	48.7	0.000000000000036	N/A	unknown function
eggNOG-mapper	UHGV-0019551_4	641112.ACOK01000103_gene525	100.0	2.42e-23	N/A	N/A
structural_annotation	UHGV-0019551_5	PF18573,NF033147	N/A	N/A	N/A	N/A
KOfam	UHGV-0019551_8	K14059	157.1	0	int; integrase	N/A
PHROG	UHGV-0019551_8	phrog_1	180.1	0	integrase	integration and excision
UniRef90	UHGV-0019551_8	UniRef90_A0A845QLR8	358.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_8	936375.HMPREF1152_1040	221.0	0	Phage integrase family	N/A
Pfam	UHGV-0019551_8	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0019551_8	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0019551_8	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0019551_8	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019551_9	UniRef90_A0A523STR4	66.2	0.000000000259	Phospholipase D family protein	N/A
eggNOG-mapper	UHGV-0019551_9	1235794.C811_00184	65.5	0.000000000223	Fibronectin type III domain	N/A
COG	UHGV-0019551_9	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
PHROG	UHGV-0019551_10	phrog_20886	43.2	0.0000000000034	N/A	unknown function
UniRef90	UHGV-0019551_10	UniRef90_UPI00164BB8FD	56.2	0.00000000902	ImmA/IrrE family metallo-endopeptidase	N/A
Pfam	UHGV-0019551_10	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0019551_10	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_11	phrog_8	59.3	9.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019551_11	UniRef90_R7N2W9	93.2	3.2e-22	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0019551_11	411462.DORLON_00819	89.7	1.38e-21	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0019551_11	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0019551_11	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0019551_11	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_14	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_15	phrog_8	51.7	0.000000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019551_15	UniRef90_UPI00195F410A	65.1	0.00000000000449	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_15	12417.Q9T1J3_9CAUD	55.8	0.00000000296	sequence-specific DNA binding	N/A
Pfam	UHGV-0019551_15	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0019551_15	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_16	NF040990	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019551_18	UniRef90_UPI00137B29E5	91.7	1.52e-20	glucosaminidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_18	1122927.KB895419_gene2381	56.2	0.000000517	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0019551_18	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
COG	UHGV-0019551_18	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_18	PF01832,NF038016,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_21	phrog_7838	140.9	9.99967e-42	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019551_21	UniRef90_A0A8D9UGW3	187.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0019551_21	742767.HMPREF9456_02397	194.0	0	N/A	N/A
structural_annotation	UHGV-0019551_21	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_22	phrog_434	115.4	5.1e-34	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019551_22	UniRef90_UPI001CF8591D	289.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0019551_22	1430331.EP10_02380	176.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0019551_22	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0019551_22	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0019551_22	PF10926,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_23	phrog_7370	54.8	0.0000000000000014	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019551_23	UniRef90_UPI001D07AE80	111.0	1.66e-29	HNH endonuclease	N/A
Pfam	UHGV-0019551_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0019551_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0019551_24	phrog_72	62.7	5.5e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019551_24	UniRef90_UPI000C7BF263	130.0	2.34e-35	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0019551_24	445972.ANACOL_01825	147.0	2.2701e-42	N/A	N/A
PHROG	UHGV-0019551_25	phrog_2514	57.0	3.3e-16	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019551_25	UniRef90_R6WQA7	80.1	0.0000000000000112	DnaD and phage-associated domain protein	N/A
eggNOG-mapper	UHGV-0019551_25	608534.GCWU000341_02937	76.3	0.0000000000000319	N/A	N/A
COG	UHGV-0019551_25	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0019551_26	phrog_9804	131.8	4.1e-39	N/A	unknown function
UniRef90	UHGV-0019551_26	UniRef90_A0A174S716	163.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_26	585394.RHOM_14005	115.0	7.51e-30	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0019551_26	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0019551_26	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_27	phrog_2245	73.7	2.7e-21	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0019551_27	UniRef90_A0A1Y4NB13	52.0	0.000000881	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_27	445972.ANACOL_02800	51.2	0.00000014	COG NOG14118 non supervised orthologous group	N/A
KOfam	UHGV-0019551_28	K03111	122.8	4.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0019551_28	phrog_44	124.9	6.1e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019551_28	UniRef90_UPI001CF91680	137.0	3.78e-39	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0019551_28	883109.HMPREF0380_00268	129.0	7.09e-37	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0019551_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0019551_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0019551_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0019551_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0019551_28	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_30	phrog_244	89.4	4.9e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0019551_30	1280692.AUJL01000044_gene2344	143.0	5.47908e-43	N/A	N/A
structural_annotation	UHGV-0019551_30	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_33	phrog_757	60.2	2.3e-17	DNA methyltransferase	other
eggNOG-mapper	UHGV-0019551_33	428127.EUBDOL_01513	301.0	0	N/A	N/A
AcrCatalog	UHGV-0019551_33	cluster_47493	175.0	0	NA	N/A
structural_annotation	UHGV-0019551_33	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_35	phrog_22292	84.6	9.9e-25	N/A	unknown function
PHROG	UHGV-0019551_36	phrog_21026	68.5	1.1e-19	N/A	unknown function
structural_annotation	UHGV-0019551_39	PF06107,COG4481	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_46	phrog_1485	92.2	6.3e-27	N/A	unknown function
UniRef90	UHGV-0019551_46	UniRef90_A0A7W3SWM2	114.0	7.45e-31	N/A	N/A
eggNOG-mapper	UHGV-0019551_46	1415774.U728_1099	86.7	1.41e-20	N/A	N/A
Pfam	UHGV-0019551_46	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
structural_annotation	UHGV-0019551_46	PF07659	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_49	PF18066	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_50	PF05263,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_52	PF00181	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_53	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_54	phrog_15863	140.9	5.5001e-42	N/A	unknown function
UniRef90	UHGV-0019551_54	UniRef90_A0A1Y3R3M0	158.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_54	693746.OBV_01780	156.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0019551_54	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0019551_55	NF040976	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_58	phrog_38	350.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0019551_58	UniRef90_A0A845QMQ7	659.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0019551_58	755731.Clo1100_2438	460.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0019551_58	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0019551_58	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0019551_58	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0019551_58	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0019551_58	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_60	phrog_156	76.6	2.5e-24	portal protein	head and packaging
eggNOG-mapper	UHGV-0019551_60	1232449.BAHV02000016_gene1822	405.0	0	N/A	N/A
structural_annotation	UHGV-0019551_60	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_62	phrog_267	89.6	3e-26	major head protein	head and packaging
UniRef90	UHGV-0019551_62	UniRef90_A0A7C6CNA9	158.0	1.44334e-43	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0019551_62	665956.HMPREF1032_03906	330.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0019551_62	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_63	PF07100,COG4288	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_65	phrog_3287	70.2	2.1e-20	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0019551_65	693746.OBV_23870	214.0	0	N/A	N/A
structural_annotation	UHGV-0019551_65	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-0019551_66	K19721	224.6	0	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0019551_66	phrog_819	145.0	0	tail protein	tail
Pfam	UHGV-0019551_66	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-0019551_67	756499.Desde_3162	61.6	0.0000000156	nuclear chromosome segregation	N/A
COG	UHGV-0019551_67	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
NCBIFam	UHGV-0019551_68	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0019551_68	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0019551_69	K18454	41.4	0.000000000016	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-0019551_69	phrog_18593	121.0	9.3e-36	N/A	unknown function
UniRef90	UHGV-0019551_69	UniRef90_R6RWR8	146.0	6.87057e-42	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0019551_69	411460.RUMTOR_02099	127.0	1.1e-34	N/A	N/A
Pfam	UHGV-0019551_69	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0019551_69	PF14600	N/A	N/A	N/A	N/A
Pfam	UHGV-0019551_70	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
structural_annotation	UHGV-0019551_70	TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_71	phrog_9854	118.7	3.2e-35	N/A	unknown function
UniRef90	UHGV-0019551_71	UniRef90_A0A0M2VQ64	249.0	0	LPD38 domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_71	1121091.AUMP01000003_gene2597	301.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-0019551_71	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0019551_71	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0019551_71	PF18857,PF18798	N/A	N/A	N/A	N/A
KOfam	UHGV-0019551_72	K08640	74.4	2.4e-21	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0019551_72	phrog_894	61.5	1.3e-17	endolysin	lysis
UniRef90	UHGV-0019551_72	UniRef90_A0A1D8GIJ0	96.3	1.45e-22	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0019551_72	1121289.JHVL01000011_gene1405	80.1	4.76e-17	Peptidase M15A	N/A
Pfam	UHGV-0019551_72	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0019551_72	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019551_72	PF08291,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0019551_73	phrog_4105	74.3	1.4e-21	N/A	unknown function