UHGV-0019994 (vOTU-167796)

Viral Genome: UHGV-0019994

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0019994
vOTU ID	vOTU-167796
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_E_17_1727__NODE_5530_length_25352_cov_517.558932
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	58.78 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9753
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	17.99
Jumbo Phage?	No

Genome Content
Length (bps)	25,352
GC Content	28.15%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	40
CDS Density	91%
Average CDS Length (bps)	575.48
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0019994_1	K06993	46.2	0.00000000000057	K06993; ribonuclease H-related protein	N/A
PHROG	UHGV-0019994_1	phrog_4538	82.8	4.7e-24	N/A	unknown function
Pfam	UHGV-0019994_1	PF19237	N/A	N/A	N/A	DUF5889
Pfam	UHGV-0019994_1	PF01693	N/A	N/A	Caulimovirus viroplasmin	Cauli_VI
COG	UHGV-0019994_1	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0019994_4	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0019994_5	476272.RUMHYD_01770	98.6	1.9e-22	N/A	N/A
PHROG	UHGV-0019994_7	phrog_21718	65.9	6.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0019994_7	1235790.C805_00058	75.1	0.0000000000000109	N/A	N/A
KOfam	UHGV-0019994_9	K01448	63.9	2.4e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0019994_9	phrog_435	88.4	1e-25	endolysin	lysis
UniRef90	UHGV-0019994_9	UniRef90_A0A351MWN4	174.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0019994_9	994573.T472_0202030	102.0	5.56e-24	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0019994_9	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0019994_9	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0019994_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0019994_9	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
KOfam	UHGV-0019994_12	K17256	48.0	0.000000000000064	IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit	N/A
PHROG	UHGV-0019994_12	phrog_18805	89.3	8.2e-39	N/A	unknown function
Pfam	UHGV-0019994_12	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
Pfam	UHGV-0019994_12	PF13855	N/A	N/A	Leucine rich repeat	LRR_8
structural_annotation	UHGV-0019994_12	PF13306	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_13	phrog_25979	47.9	0.00000000000012	N/A	unknown function
UniRef90	UHGV-0019994_13	UniRef90_UPI001F099C1A	53.1	0.00000252	collagen-like protein	N/A
eggNOG-mapper	UHGV-0019994_13	1423814.HMPREF0549_1797	59.7	0.0000000206	Glycosyl hydrolases family 25	N/A
COG	UHGV-0019994_13	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0019994_14	PF07041	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_15	phrog_15594	67.7	8.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0019994_15	1163671.JAGI01000002_gene1216	110.0	6.25e-23	Phage Tail Collar Domain	N/A
COG	UHGV-0019994_15	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0019994_16	PF07041	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_19	phrog_18190	157.4	0	N/A	unknown function
UniRef90	UHGV-0019994_19	UniRef90_UPI001D15C06A	90.1	0.0000000000000014	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0019994_19	483218.BACPEC_01143	95.5	3.93e-18	N/A	N/A
structural_annotation	UHGV-0019994_19	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_20	phrog_1194	66.2	4.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0019994_20	1304866.K413DRAFT_3047	94.0	8.81e-23	N/A	N/A
Pfam	UHGV-0019994_20	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0019994_20	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_21	phrog_1535	133.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0019994_21	UniRef90_UPI001DBC5439	168.0	1.29e-39	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-0019994_21	1280692.AUJL01000027_gene2150	103.0	1.1e-19	phage tail tape measure protein	N/A
COG	UHGV-0019994_21	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019994_21	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_22	phrog_706	94.3	1.4e-27	N/A	unknown function
UniRef90	UHGV-0019994_22	UniRef90_A0A173TZF2	145.0	6.43995e-41	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0019994_22	476272.RUMHYD_01784	129.0	2.3e-35	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0019994_22	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0019994_22	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_23	phrog_11299	93.1	2.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-0019994_23	1160721.RBI_II00531	57.4	0.0000000452	N/A	N/A
structural_annotation	UHGV-0019994_23	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_24	phrog_3099	67.2	2.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0019994_24	665956.HMPREF1032_03060	93.2	2.31e-21	N/A	N/A
structural_annotation	UHGV-0019994_24	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_25	phrog_3266	62.4	6.8e-18	tail completion	connector
structural_annotation	UHGV-0019994_25	PF12691	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019994_26	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_28	phrog_541	51.3	0.000000000000019	head-tail adaptor	connector
UniRef90	UHGV-0019994_30	UniRef90_A0A0M2NI16	283.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-0019994_30	PF05065,PF18316,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_31	phrog_2303	41.6	0.000000000012	head scaffolding protein	head and packaging
structural_annotation	UHGV-0019994_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_32	phrog_533	291.4	0	portal protein	head and packaging
UniRef90	UHGV-0019994_32	UniRef90_A0A843GW45	272.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0019994_32	1120998.AUFC01000030_gene2232	259.0	0	N/A	N/A
Pfam	UHGV-0019994_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0019994_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0019994_33	K01160	50.7	0.000000000000048	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0019994_33	phrog_34	54.6	0.0000000000000023	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019994_33	UniRef90_A0A843HIU7	135.0	1.29e-38	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0019994_33	796940.HMPREF9628_00163	116.0	4.63e-32	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0019994_33	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0019994_33	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0019994_33	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0019994_34	K06909	64.0	2.4e-18	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0019994_34	phrog_2	56.6	6.5e-16	terminase large subunit	head and packaging
UniRef90	UHGV-0019994_34	UniRef90_S0JAW2	256.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0019994_34	1235790.C805_00040	256.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0019994_34	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0019994_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0019994_34	PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0019994_35	phrog_59	121.5	3.6e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019994_35	UniRef90_A0A7M1RT04	103.0	1.4e-24	Putative HNH homing endonuclease	N/A
eggNOG-mapper	UHGV-0019994_35	1229751.R9QM99_9CAUD	97.8	5.33e-23	HNH endonuclease	N/A
PADLOC	UHGV-0019994_35	HEase_00016	67.8	2.3e-19	homing endonuclease	RM
Pfam	UHGV-0019994_35	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0019994_35	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0019994_35	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019994_39	UniRef90_A0A1M6Y0K3	91.3	2.02e-20	Replication protein (RepL)	N/A
UniRef90	UHGV-0019994_40	UniRef90_UPI00189C6E3A	129.0	4.72e-35	replication/maintenance protein RepL	N/A
eggNOG-mapper	UHGV-0019994_40	1046714.AMRX01000007_gene2057	72.8	0.000000000000073	N/A	N/A
Pfam	UHGV-0019994_40	PF05732	N/A	N/A	Firmicute plasmid replication protein (RepL)	RepL