UHGV-0022548 (vOTU-077300)

Viral Genome: UHGV-0022548

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0022548
vOTU ID	vOTU-077300
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_K_17_1778__NODE_2217_length_42017_cov_94.697330
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	97.13 (High-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9793
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	12.96
Jumbo Phage?	No

Genome Content
Length (bps)	41,994
GC Content	50.26%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	61
CDS Density	92%
Average CDS Length (bps)	635.61
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0022548_1	K13884	50.9	0.00000000000002	MARCO; macrophage receptor with collagenous structure	N/A
PHROG	UHGV-0022548_1	phrog_4433	99.0	5.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0022548_1	445970.ALIPUT_01221	101.0	1.3e-21	DNA-templated transcription, initiation	N/A
Pfam	UHGV-0022548_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0022548_1	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-0022548_2	phrog_16304	67.4	2.7e-19	N/A	unknown function
UniRef90	UHGV-0022548_2	UniRef90_UPI001E560709	101.0	1.56e-22	N/A	N/A
eggNOG-mapper	UHGV-0022548_2	1226322.HMPREF1545_00016	55.5	0.00000187	HNH endonuclease	N/A
Pfam	UHGV-0022548_2	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0022548_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0022548_2	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0022548_3	K03111	117.7	1.7e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0022548_3	phrog_44	119.3	3.5e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022548_3	UniRef90_R6IDK3	139.0	6.38e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0022548_3	1235797.C816_01960	129.0	1.42e-36	Single-strand binding protein family	N/A
Pfam	UHGV-0022548_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0022548_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0022548_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0022548_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0022548_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_4	phrog_7566	86.1	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0022548_4	508419.F8J187_9CAUD	107.0	2.79e-29	N/A	N/A
PHROG	UHGV-0022548_5	phrog_72	54.2	0.0000000000000022	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022548_5	UniRef90_A0A8D9PDS2	136.0	1.2e-37	NinB protein	N/A
eggNOG-mapper	UHGV-0022548_5	445972.ANACOL_01825	117.0	6.35e-31	N/A	N/A
structural_annotation	UHGV-0022548_5	PF05772	N/A	N/A	N/A	N/A
Pfam	UHGV-0022548_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0022548_7	phrog_7838	124.2	1.2e-36	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022548_7	UniRef90_A0A8D9UGW3	184.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0022548_7	742767.HMPREF9456_02052	151.0	4.03574e-43	N/A	N/A
structural_annotation	UHGV-0022548_7	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_8	phrog_253	97.7	1.3e-28	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0022548_8	UniRef90_A0A1C5N4H2	105.0	5.29e-26	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0022548_8	1410670.JHXF01000015_gene2268	103.0	8.28e-26	Siphovirus Gp157	N/A
Pfam	UHGV-0022548_8	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0022548_8	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022548_10	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0022548_11	K22300	52.0	0.000000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0022548_11	phrog_8	43.3	0.000000000008	transcriptional regulator	transcription regulation
UniRef90	UHGV-0022548_11	UniRef90_A0A810PZI0	73.9	3.71e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0022548_11	693746.OBV_25500	62.4	0.00000000000245	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0022548_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0022548_11	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0022548_11	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0022548_13	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
UniRef90	UHGV-0022548_15	UniRef90_UPI00189C2E14	52.4	0.00000263	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0022548_15	1304866.K413DRAFT_0834	56.2	0.0000000133	PFAM helix-turn-helix domain protein	N/A
COG	UHGV-0022548_15	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0022548_15	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022548_18	UniRef90_A0A8D9PDV2	53.1	0.000000158	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-0022548_18	1392493.JIAB01000001_gene1404	57.8	0.00000000583	repeat protein	N/A
COG	UHGV-0022548_18	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
UniRef90	UHGV-0022548_20	UniRef90_A0A8D9UHA6	70.5	0.0000000000112	Helix-turn-helix XRE-family like protein	N/A
eggNOG-mapper	UHGV-0022548_20	1382304.JNIL01000001_gene3508	50.1	0.00000758	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0022548_20	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0022548_20	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0022548_21	K14059	152.5	4.2039e-45	int; integrase	N/A
PHROG	UHGV-0022548_21	phrog_1	155.0	0	integrase	integration and excision
UniRef90	UHGV-0022548_21	UniRef90_R6I1Y0	330.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0022548_21	1384066.JAGT01000001_gene153	112.0	1.85e-25	Phage integrase family	N/A
Pfam	UHGV-0022548_21	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0022548_21	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0022548_21	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0022548_22	PF02915	N/A	N/A	Rubrerythrin	Rubrerythrin
structural_annotation	UHGV-0022548_25	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_26	phrog_10091	110.7	9.4e-33	holin	lysis
UniRef90	UHGV-0022548_26	UniRef90_A0A1Y4RHF4	129.0	3.07e-37	Phage holin	N/A
eggNOG-mapper	UHGV-0022548_26	445975.COLSTE_02144	114.0	3.2e-32	Bacteriophage holin	N/A
Pfam	UHGV-0022548_26	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0022548_26	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0022548_26	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022548_26	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_27	phrog_1863	66.8	2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0022548_27	748224.HMPREF9436_01412	93.2	4.35e-24	N/A	N/A
PHROG	UHGV-0022548_28	phrog_21357	58.4	8.2e-17	endolysin	lysis
UniRef90	UHGV-0022548_28	UniRef90_UPI001BB47323	88.6	9.11e-18	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0022548_28	693746.OBV_22650	76.3	0.0000000000000672	CHAP domain	N/A
Pfam	UHGV-0022548_28	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0022548_28	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0022548_28	TIGR02594,COG3738	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0022548_30	1519439.JPJG01000060_gene1895	135.0	9.41e-38	N/A	N/A
structural_annotation	UHGV-0022548_30	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_31	phrog_10993	51.6	0.000000000000014	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-0022548_31	718252.FP2_16970	70.9	0.000000000198	N/A	N/A
Pfam	UHGV-0022548_31	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0022548_31	PF19789,PF08244	N/A	N/A	N/A	N/A
KOfam	UHGV-0022548_32	K03646	42.5	0.000000000014	tolA; colicin import membrane protein	N/A
eggNOG-mapper	UHGV-0022548_32	1007096.BAGW01000031_gene143	65.1	0.00000000512	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0022548_32	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
eggNOG-mapper	UHGV-0022548_33	693746.OBV_01590	508.0	0	N/A	N/A
eggNOG-mapper	UHGV-0022548_34	1410650.JHWL01000003_gene2815	92.4	3.26e-17	N/A	N/A
PHROG	UHGV-0022548_36	phrog_511	206.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0022548_36	1410650.JHWL01000003_gene2827	257.0	0	N/A	N/A
structural_annotation	UHGV-0022548_36	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_37	phrog_12105	105.2	4.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0022548_37	1519439.JPJG01000060_gene1891	66.6	0.00000000000213	N/A	N/A
PHROG	UHGV-0022548_38	phrog_15239	40.8	0.000000000034	N/A	unknown function
PHROG	UHGV-0022548_39	phrog_1357	199.1	0	major head protein	head and packaging
UniRef90	UHGV-0022548_39	UniRef90_A0A2V2CFL5	533.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0022548_39	1410650.JHWL01000003_gene2830	265.0	0	N/A	N/A
NCBIFam	UHGV-0022548_39	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0022548_39	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_40	phrog_13908	177.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0022548_40	1410650.JHWL01000003_gene2831	95.9	9.12e-20	N/A	N/A
KOfam	UHGV-0022548_41	K07584	60.2	4e-17	N/A	N/A
PHROG	UHGV-0022548_41	phrog_4478	66.1	4e-19	peptidase	other
UniRef90	UHGV-0022548_41	UniRef90_UPI001961A1AB	55.8	0.0000000766	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0022548_41	1123009.AUID01000013_gene1737	49.7	0.00000385	Cysteine protease Prp	N/A
Pfam	UHGV-0022548_41	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0022548_41	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0022548_41	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_42	phrog_156	294.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0022548_42	1410650.JHWL01000003_gene2833	498.0	0	N/A	N/A
structural_annotation	UHGV-0022548_42	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0022548_43	K06909	139.1	3.69999e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0022548_43	phrog_979	144.2	3.64338e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0022548_43	UniRef90_A0A3C0NMI6	628.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0022548_43	1410650.JHWL01000003_gene2834	553.0	0	N/A	N/A
Pfam	UHGV-0022548_43	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0022548_43	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0022548_43	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0022548_44	UniRef90_A0A3C0NNN3	58.2	0.000000162	HTH psq-type domain-containing protein	N/A
PHROG	UHGV-0022548_47	phrog_25567	44.4	0.0000000000021	N/A	unknown function
UniRef90	UHGV-0022548_47	UniRef90_UPI00164AED9E	86.3	1.3e-19	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0022548_47	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_48	phrog_4973	53.6	0.0000000000000038	N/A	unknown function
UniRef90	UHGV-0022548_48	UniRef90_A0A3D3Y0P8	68.6	0.000000000000124	DNA-binding protein	N/A
Pfam	UHGV-0022548_48	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0022548_48	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
Pfam	UHGV-0022548_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0022548_51	phrog_18716	125.8	1.6e-37	N/A	unknown function
UniRef90	UHGV-0022548_51	UniRef90_A0A268IIR4	124.0	2.98e-34	N/A	N/A
eggNOG-mapper	UHGV-0022548_51	665959.HMPREF1013_00856	122.0	2.13e-34	N/A	N/A
Pfam	UHGV-0022548_51	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0022548_51	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_55	phrog_10714	51.1	0.000000000000021	N/A	unknown function
KOfam	UHGV-0022548_57	K17398	91.5	7.6e-39	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-0022548_57	phrog_17284	111.1	0	N/A	unknown function
UniRef90	UHGV-0022548_57	UniRef90_A0A1Q6RQI3	587.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0022548_57	1235797.C816_01614	419.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-0022548_57	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0022548_57	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0022548_57	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_59	phrog_954	195.2	0	DNA methyltransferase	other
UniRef90	UHGV-0022548_59	UniRef90_A0A810Q0N4	273.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0022548_59	1280698.AUJS01000007_gene1028	271.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0022548_59	MTase_II_00074	205.2	0	Type II methyltransferase	RM
Pfam	UHGV-0022548_59	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0022548_59	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0022548_59	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-0022548_60	K01449	49.5	0.000000000000067	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0022548_60	phrog_30550	141.7	2.79979e-42	N/A	unknown function
UniRef90	UHGV-0022548_60	UniRef90_R6CIF0	125.0	9.72e-34	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0022548_60	1519439.JPJG01000077_gene920	111.0	2.15e-29	Cell Wall Hydrolase	N/A
Pfam	UHGV-0022548_60	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-0022548_60	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0022548_61	phrog_27197	68.3	7.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0022548_61	886882.PPSC2_p0363	94.0	4.96e-21	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0022548_61	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0022548_61	NF007410	N/A	N/A	N/A	N/A