UHGV-0024030 (vOTU-071927)

Viral Genome: UHGV-0024030

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0024030
vOTU ID	vOTU-071927
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_E_9_1723__NODE_1859_length_37507_cov_5.015068
Associated Biosample	SAMEA4766003
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	91.32 (High-quality)
Trimmed?	No
CheckV Viral Markers	23
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9803
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	39.13
Jumbo Phage?	No

Genome Content
Length (bps)	37,507
GC Content	39.50%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	62
CDS Density	92%
Average CDS Length (bps)	555.44
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0024030_1	K14059	150.5	1.68156e-44	int; integrase	N/A
PHROG	UHGV-0024030_1	phrog_1	168.6	0	integrase	integration and excision
UniRef90	UHGV-0024030_1	UniRef90_UPI0018A893E8	710.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0024030_1	1280698.AUJS01000007_gene999	342.0	0	Phage integrase family	N/A
Pfam	UHGV-0024030_1	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0024030_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0024030_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0024030_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0024030_2	K07504	443.0	0	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-0024030_2	phrog_4225	490.9	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024030_2	UniRef90_A0A173YHF4	653.0	0	Type I site-specific deoxyribonuclease	N/A
eggNOG-mapper	UHGV-0024030_2	411462.DORLON_00821	573.0	0	Type I restriction enzyme R protein N terminus (HSDR_N)	N/A
Pfam	UHGV-0024030_2	PF04313	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
COG	UHGV-0024030_2	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024030_2	PF13588,TIGR04256,COG4748	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_3	phrog_87	91.4	7.7e-27	metallo-protease	other
UniRef90	UHGV-0024030_3	UniRef90_UPI001D01270F	318.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0024030_3	742765.HMPREF9457_02093	195.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0024030_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0024030_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0024030_3	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0024030_4	K07727	40.1	0.00000000009	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0024030_4	phrog_8	40.7	0.000000000052	transcriptional regulator	transcription regulation
UniRef90	UHGV-0024030_4	UniRef90_A0A173Z9V2	174.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_4	742735.HMPREF9467_01804	76.3	1.02e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0024030_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0024030_4	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024030_5	UniRef90_A0A416GY85	106.0	8.92e-29	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0024030_5	320850.Q4ZA66_9CAUD	48.9	0.00000076	N/A	N/A
structural_annotation	UHGV-0024030_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024030_6	PF20037,COG3212	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_10	phrog_674	174.9	0	N/A	unknown function
UniRef90	UHGV-0024030_10	UniRef90_A0A373MX71	407.0	0	N/A	N/A
eggNOG-mapper	UHGV-0024030_10	1298920.KI911353_gene4871	157.0	4.49817e-43	N/A	N/A
Pfam	UHGV-0024030_10	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0024030_10	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_11	phrog_155	141.3	6.60012e-42	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024030_11	UniRef90_UPI001EDDFED5	392.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0024030_11	1298920.KI911353_gene4870	149.0	4.38046e-42	ERF superfamily	N/A
Pfam	UHGV-0024030_11	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0024030_11	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_12	phrog_72	45.7	0.00000000000066	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0024030_12	411470.RUMGNA_02194	134.0	4.11e-37	N/A	N/A
structural_annotation	UHGV-0024030_12	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_13	phrog_2113	46.5	0.00000000000046	N/A	unknown function
UniRef90	UHGV-0024030_13	UniRef90_A0A357NGS2	68.2	0.00000000000796	HTH_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_13	365659.smi_2008	49.3	0.00000784	N/A	N/A
structural_annotation	UHGV-0024030_13	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_14	phrog_244	83.7	2.9e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0024030_14	33035.JPJF01000122_gene2460	155.0	0	N/A	N/A
structural_annotation	UHGV-0024030_14	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_15	phrog_10469	99.1	1.4e-30	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024030_15	UniRef90_A0A174WT25	174.0	0	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_15	742733.HMPREF9469_01845	160.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0024030_15	PF10771,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024030_16	PF09889,MF_00649,NF001638,COG4068	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024030_17	UniRef90_UPI0006C0F90C	274.0	0	N/A	N/A
Pfam	UHGV-0024030_17	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0024030_17	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024030_21	PF17354	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024030_22	UniRef90_K1TWB1	97.4	1.81e-25	DNA methylase (Fragment)	N/A
eggNOG-mapper	UHGV-0024030_22	411468.CLOSCI_00299	96.7	9.14e-24	DNA methylase	N/A
COG	UHGV-0024030_22	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0024030_23	K00571	102.8	4.3e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0024030_23	phrog_67	89.0	3.4e-26	DNA methyltransferase	other
UniRef90	UHGV-0024030_23	UniRef90_C0BC25	389.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0024030_23	658655.HMPREF0988_00878	333.0	0	DNA methylase	N/A
PADLOC	UHGV-0024030_23	MTase_II_00157	78.8	1e-22	Type II methyltransferase	RM
Pfam	UHGV-0024030_23	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0024030_23	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0024030_23	PF01555,MF_00786,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_26	phrog_5051	126.6	1.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0024030_27	568816.Acin_1246	58.9	0.0000000032	N/A	N/A
structural_annotation	UHGV-0024030_29	PF17400	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_32	phrog_36	84.2	1.7e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0024030_32	UniRef90_A0A373STV4	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-0024030_32	411461.DORFOR_00754	147.0	2.90069e-43	sigma factor activity	N/A
Pfam	UHGV-0024030_32	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0024030_32	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0024030_32	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_33	phrog_8187	44.8	0.000000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0024030_33	411461.DORFOR_00752	267.0	0	N/A	N/A
PADLOC	UHGV-0024030_33	AbiN	40.5	0.000000000055	AbiN	Abi
KOfam	UHGV-0024030_34	K07474	154.9	1.4013e-45	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0024030_34	phrog_51	148.1	4.48416e-44	terminase small subunit	head and packaging
UniRef90	UHGV-0024030_34	UniRef90_A0A415N140	266.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0024030_34	887325.HMPREF0381_0088	179.0	0	Terminase small subunit	N/A
Pfam	UHGV-0024030_34	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0024030_34	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0024030_34	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0024030_35	K06909	424.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0024030_35	phrog_3717	256.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0024030_35	UniRef90_A0A374E8M6	868.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0024030_35	861454.HMPREF9099_00528	650.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0024030_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0024030_35	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0024030_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0024030_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0024030_35	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0024030_35	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_36	phrog_1233	67.8	1.8e-19	N/A	unknown function
UniRef90	UHGV-0024030_36	UniRef90_UPI001C39EFB9	75.9	0.00000000000000136	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0024030_36	936375.HMPREF1152_1074	73.2	0.00000000000000234	N/A	N/A
PHROG	UHGV-0024030_37	phrog_64	253.5	0	portal protein	head and packaging
UniRef90	UHGV-0024030_37	UniRef90_A0A374E6B1	947.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0024030_37	1256908.HMPREF0373_00485	608.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0024030_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0024030_37	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_38	phrog_595	153.4	1.4013e-45	head maturation protease	head and packaging
UniRef90	UHGV-0024030_38	UniRef90_A0A374E8T1	419.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_38	1256908.HMPREF0373_00484	265.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0024030_38	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0024030_38	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_40	phrog_419	94.3	1.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0024030_40	1499683.CCFF01000005_gene67	88.2	1.05e-21	N/A	N/A
structural_annotation	UHGV-0024030_40	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_41	phrog_194	79.6	3.7e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0024030_41	UniRef90_UPI001373E5C4	180.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0024030_41	1235800.C819_02235	109.0	4.77e-27	Phage minor structural protein GP20	N/A
Pfam	UHGV-0024030_41	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0024030_41	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_42	phrog_247	218.6	0	major head protein	head and packaging
UniRef90	UHGV-0024030_42	UniRef90_UPI001BA5448B	261.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0024030_42	33035.JPJF01000106_gene3132	364.0	0	N/A	N/A
structural_annotation	UHGV-0024030_42	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_43	phrog_1236	177.4	0	head protein	head and packaging
eggNOG-mapper	UHGV-0024030_43	1235800.C819_02232	192.0	0	N/A	N/A
structural_annotation	UHGV-0024030_43	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_44	phrog_1059	44.1	1.5e-24	head-tail adaptor	connector
UniRef90	UHGV-0024030_44	UniRef90_UPI00156E52AA	159.0	0	head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0024030_44	1235800.C819_02231	126.0	8.38e-36	N/A	N/A
structural_annotation	UHGV-0024030_44	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_45	phrog_5	44.3	0.0000000000047	tail completion or Neck1 protein	connector
UniRef90	UHGV-0024030_45	UniRef90_A0A415N123	281.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0024030_45	1256908.HMPREF0373_00473	141.0	1.70006e-41	N/A	N/A
Pfam	UHGV-0024030_45	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
PHROG	UHGV-0024030_46	phrog_957	50.4	0.000000000000034	head protein	head and packaging
eggNOG-mapper	UHGV-0024030_46	1235800.C819_02229	78.6	5.02e-17	N/A	N/A
structural_annotation	UHGV-0024030_46	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_47	phrog_885	162.8	0	major tail protein	tail
eggNOG-mapper	UHGV-0024030_47	1235800.C819_02228	100.0	3.26e-23	N/A	N/A
structural_annotation	UHGV-0024030_47	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_49	phrog_1021	52.1	0.0000000000000099	N/A	unknown function
PHROG	UHGV-0024030_50	phrog_58	315.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0024030_50	UniRef90_A0A0D0SGC8	254.0	0	Phage minor tail protein	N/A
eggNOG-mapper	UHGV-0024030_50	742765.HMPREF9457_02136	251.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0024030_50	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_51	phrog_33	50.7	0.000000000000043	distal tail protein Dit	tail
UniRef90	UHGV-0024030_51	UniRef90_A0A414P9H2	194.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0024030_51	411468.CLOSCI_02410	178.0	0	N/A	N/A
structural_annotation	UHGV-0024030_51	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_52	phrog_538	204.0	0	minor tail protein	tail
UniRef90	UHGV-0024030_52	UniRef90_A0A1C5PP83	259.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0024030_52	1256908.HMPREF0373_00466	254.0	0	N/A	N/A
Pfam	UHGV-0024030_52	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0024030_52	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_53	phrog_9994	169.7	0	N/A	unknown function
UniRef90	UHGV-0024030_53	UniRef90_UPI000C76CD77	136.0	6.88e-35	H-type lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_53	742723.HMPREF9477_00894	129.0	5.94e-33	N/A	N/A
structural_annotation	UHGV-0024030_53	PF20747,PF13157,TIGR04362	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_54	phrog_15594	105.4	2.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0024030_54	1118055.CAGU01000013_gene763	65.5	0.00000000000158	N/A	N/A
structural_annotation	UHGV-0024030_54	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_55	phrog_31538	79.4	4.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0024030_55	742740.HMPREF9474_02274	53.9	0.000000171	N/A	N/A
PHROG	UHGV-0024030_56	phrog_13589	201.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0024030_56	742733.HMPREF9469_05009	257.0	0	N/A	N/A
PHROG	UHGV-0024030_57	phrog_13589	59.3	2.7e-17	N/A	unknown function
UniRef90	UHGV-0024030_57	UniRef90_A0A1T4VU27	92.8	2.83e-16	Leucine rich repeat-containing protein	N/A
eggNOG-mapper	UHGV-0024030_57	411460.RUMTOR_01324	103.0	7.88e-23	N/A	N/A
PHROG	UHGV-0024030_59	phrog_1863	53.7	0.0000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0024030_59	1226322.HMPREF1545_04027	65.1	0.000000000000913	N/A	N/A
PHROG	UHGV-0024030_60	phrog_18218	136.4	8.39994e-41	N/A	unknown function
UniRef90	UHGV-0024030_60	UniRef90_A0A373SUI3	190.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-0024030_60	658655.HMPREF0988_02546	155.0	0	N/A	N/A
structural_annotation	UHGV-0024030_60	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0024030_61	phrog_7854	137.8	0	endolysin	lysis
UniRef90	UHGV-0024030_61	UniRef90_A0A373SW30	739.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_61	411462.DORLON_00764	229.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0024030_61	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0024030_61	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-0024030_61	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0024030_61	PF01520,TIGR02883,COG0860,COG5263	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024030_62	UniRef90_UPI001F3A03E2	57.4	0.000000000344	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0024030_62	97139.C824_05563	57.8	0.0000000000503	DNA-binding helix-turn-helix protein	N/A
COG	UHGV-0024030_62	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A