UHGV-0025705 (vOTU-074002)

Viral Genome: UHGV-0025705

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0025705
vOTU ID	vOTU-074002
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_K_17_1778__NODE_2343_length_40345_cov_5.966922
Associated Biosample	SAMEA4766037
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	95.65 (High-quality)
Trimmed?	No
CheckV Viral Markers	18
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9815
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	30.15
Jumbo Phage?	No

Genome Content
Length (bps)	40,345
GC Content	54.06%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	61
CDS Density	89%
Average CDS Length (bps)	590.71
Total tRNA Genes	4
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.65)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0025705_1	657322.FPR_13550	50.1	0.0000098	Bacterial Ig-like domain (group 2)	N/A
COG	UHGV-0025705_1	COG5492	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025705_2	1304866.K413DRAFT_1235	60.1	0.0000000198	PFAM Phage tail protein	N/A
COG	UHGV-0025705_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-0025705_4	phrog_3558	270.8	0	tail protein	tail
UniRef90	UHGV-0025705_4	UniRef90_A0A844DGT5	1126.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0025705_4	272562.CA_C0063	216.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0025705_4	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0025705_4	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0025705_4	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_5	phrog_1686	89.2	3.7e-26	tail length tape measure protein	tail
UniRef90	UHGV-0025705_5	UniRef90_A0A844DDD5	994.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0025705_5	883066.HMPREF9233_00516	123.0	1.09e-25	tape measure	N/A
Pfam	UHGV-0025705_5	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0025705_5	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0025705_5	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0025705_5	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_7	phrog_885	66.4	3.5e-19	major tail protein	tail
UniRef90	UHGV-0025705_7	UniRef90_A0A843J9F0	127.0	1.36e-32	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0025705_7	457396.CSBG_01054	58.5	0.0000000969	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0025705_7	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0025705_7	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025705_8	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_9	phrog_17977	45.0	0.0000000000014	N/A	unknown function
UniRef90	UHGV-0025705_9	UniRef90_A0A844DHJ8	238.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-0025705_9	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_11	phrog_544	142.2	3.69943e-42	major head protein	head and packaging
UniRef90	UHGV-0025705_11	UniRef90_R0BKA1	435.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0025705_11	476272.RUMHYD_01776	322.0	0	N/A	N/A
structural_annotation	UHGV-0025705_11	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025705_12	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_13	phrog_478	124.6	4e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0025705_13	UniRef90_A0A373Q857	167.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0025705_13	1111121.HMPREF1247_0834	94.4	4.99e-23	N/A	N/A
PHROG	UHGV-0025705_14	phrog_5	51.6	0.000000000000022	tail completion or Neck1 protein	connector
UniRef90	UHGV-0025705_14	UniRef90_A0A844DDB3	296.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0025705_14	1123309.AQYB01000018_gene814	92.4	5.62e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0025705_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0025705_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_15	phrog_2468	82.2	4.8e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0025705_15	UniRef90_A0A844DBI4	605.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0025705_15	1504822.CCNO01000013_gene286	127.0	1.53e-29	cell adhesion	N/A
Pfam	UHGV-0025705_15	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0025705_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025705_15	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_16	phrog_21498	304.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0025705_16	78346.BRUM_0376	276.0	0	DNA binding	N/A
COG	UHGV-0025705_16	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0025705_16	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_17	phrog_64	123.7	5.5e-37	portal protein	head and packaging
UniRef90	UHGV-0025705_17	UniRef90_A0A6N7TNT3	493.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0025705_17	673376.F2VHW1_9CAUD	170.0	4.2039e-45	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0025705_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0025705_17	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0025705_18	K06909	368.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0025705_18	phrog_3717	159.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0025705_18	UniRef90_A0A416S378	482.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0025705_18	665956.HMPREF1032_02957	446.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0025705_18	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0025705_18	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0025705_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0025705_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0025705_18	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_19	phrog_36	53.6	0.0000000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-0025705_19	UniRef90_A0A6N7TNN9	60.8	0.0000000134	N/A	N/A
structural_annotation	UHGV-0025705_19	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0025705_21	K01160	61.9	1.9e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0025705_21	phrog_34	60.4	3.9e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025705_21	UniRef90_A0A844DBG8	235.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0025705_21	561177.ANHYDRO_01396	134.0	6.47e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0025705_21	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0025705_21	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0025705_21	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_22	phrog_3136	116.3	9.3e-35	N/A	unknown function
UniRef90	UHGV-0025705_22	UniRef90_A0A6N7TMC2	165.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0025705_22	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0025705_22	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_25	phrog_757	168.8	0	DNA methyltransferase	other
UniRef90	UHGV-0025705_25	UniRef90_A0A417JTT5	307.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0025705_25	1095750.HMPREF9970_0173	217.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0025705_25	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0025705_25	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_27	phrog_5968	76.1	4.1e-22	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025705_27	UniRef90_UPI001C02E649	361.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0025705_27	718252.FP2_01000	162.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0025705_27	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0025705_27	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0025705_27	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0025705_27	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0025705_28	K25373	52.0	0.0000000000000094	ACRV1; acrosomal protein SP-10	N/A
PHROG	UHGV-0025705_28	phrog_14105	236.4	0	N/A	unknown function
UniRef90	UHGV-0025705_28	UniRef90_U2BMS0	233.0	0	Pentapeptide repeat protein	N/A
eggNOG-mapper	UHGV-0025705_28	742740.HMPREF9474_02379	147.0	1.12999e-40	dextransucrase activity	N/A
Pfam	UHGV-0025705_28	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-0025705_28	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
KOfam	UHGV-0025705_29	K03111	143.5	2.10055e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0025705_29	phrog_44	145.5	2.8026e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025705_29	UniRef90_A0A844DI52	248.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0025705_29	718252.FP2_06770	216.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0025705_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0025705_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0025705_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0025705_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0025705_29	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_30	phrog_7838	110.3	2.1e-32	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025705_30	UniRef90_A0A8D9UGW3	178.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0025705_30	742767.HMPREF9456_02052	134.0	3.31e-36	N/A	N/A
structural_annotation	UHGV-0025705_30	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025705_32	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025705_34	PF07870,COG3461	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_37	phrog_15946	82.7	7.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0025705_37	1445613.JALM01000017_gene5891	52.0	0.00000412	N/A	N/A
PHROG	UHGV-0025705_38	phrog_4652	89.6	5.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0025705_38	397290.C810_01459	157.0	4.2039e-45	N/A	N/A
structural_annotation	UHGV-0025705_38	TIGR02582,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0025705_39	K07741	100.2	4.7e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0025705_39	phrog_63	192.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0025705_39	UniRef90_A0A844D5R9	427.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0025705_39	1423816.BACQ01000027_gene970	223.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0025705_39	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0025705_39	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0025705_39	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0025705_39	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0025705_39	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025705_41	UniRef90_A0A1C7FQD9	78.2	1.55e-17	Transcriptional regulator	N/A
structural_annotation	UHGV-0025705_41	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_42	phrog_8	46.2	0.00000000000098	transcriptional regulator	transcription regulation
UniRef90	UHGV-0025705_42	UniRef90_A0A1V0QCF9	82.0	6.12e-18	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0025705_42	1226322.HMPREF1545_00148	77.8	5.79e-17	Transcriptional	N/A
Pfam	UHGV-0025705_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0025705_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0025705_42	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_45	phrog_4980	109.0	2.3e-32	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0025705_45	UniRef90_UPI000F643789	77.4	0.0000000000000185	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0025705_45	428127.EUBDOL_01530	68.2	0.0000000000528	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0025705_45	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0025705_45	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0025705_45	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0025705_45	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025705_48	UniRef90_A0A6N7TLT0	207.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0025705_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0025705_48	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0025705_49	K14059	148.7	6.86636e-44	int; integrase	N/A
PHROG	UHGV-0025705_49	phrog_1	168.6	0	integrase	integration and excision
UniRef90	UHGV-0025705_49	UniRef90_A0A6N7TNQ4	674.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0025705_49	411471.SUBVAR_05137	250.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0025705_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0025705_49	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0025705_49	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025705_51	476272.RUMHYD_01772	55.8	0.0000000948	N/A	N/A
structural_annotation	UHGV-0025705_51	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_52	phrog_20016	199.8	0	N/A	unknown function
UniRef90	UHGV-0025705_52	UniRef90_A0A285PT46	195.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0025705_52	1226322.HMPREF1545_00077	179.0	0	N/A	N/A
structural_annotation	UHGV-0025705_52	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0025705_53	phrog_16490	137.6	7.20001e-41	N/A	unknown function
eggNOG-mapper	UHGV-0025705_53	1408437.JNJN01000043_gene803	131.0	1.28e-34	N/A	N/A
PHROG	UHGV-0025705_54	phrog_22984	77.2	1.2e-22	N/A	unknown function
PHROG	UHGV-0025705_55	phrog_21718	99.2	4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0025705_55	397290.C810_05210	90.1	9.57e-21	N/A	N/A
PHROG	UHGV-0025705_56	phrog_3754	98.6	5.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0025705_56	476272.RUMHYD_01764	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-0025705_57	1160721.RBI_I00206	56.6	0.00000000123	N/A	N/A
KOfam	UHGV-0025705_61	K24213	75.4	4.4e-22	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0025705_61	phrog_5073	101.5	6.8e-30	tail fiber protein	tail
UniRef90	UHGV-0025705_61	UniRef90_UPI0018835F0C	536.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0025705_61	411483.FAEPRAA2165_00757	170.0	7.00649e-45	N/A	N/A
Pfam	UHGV-0025705_61	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0025705_61	PF10651	N/A	N/A	N/A	N/A