UHGV-0026892 (vOTU-129039)

Viral Genome: UHGV-0026892

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0026892
vOTU ID	vOTU-129039
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_H_11_1999__NODE_1266_length_29278_cov_5.765590
Associated Biosample	SAMEA4766139
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	65.17 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9729
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.91
Jumbo Phage?	No

Genome Content
Length (bps)	29,278
GC Content	32.74%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	47
CDS Density	92%
Average CDS Length (bps)	574.02
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0026892_2	phrog_33451	43.8	0.0000000000011	N/A	unknown function
structural_annotation	UHGV-0026892_2	PF06786	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026892_3	UniRef90_A0A395WBY6	161.0	0	N/A	N/A
Pfam	UHGV-0026892_3	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0026892_5	phrog_918	102.3	1.9e-30	N/A	unknown function
UniRef90	UHGV-0026892_5	UniRef90_UPI001D0B68F4	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026892_5	411473.RUMCAL_00361	114.0	3.16e-32	N/A	N/A
Pfam	UHGV-0026892_5	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0026892_5	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_6	phrog_2118	114.6	8.5e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026892_6	UniRef90_A0A374RH39	193.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0026892_6	610130.Closa_0730	155.0	0	HNH endonuclease	N/A
Pfam	UHGV-0026892_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0026892_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0026892_6	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_7	phrog_2715	125.6	2.5e-37	N/A	unknown function
eggNOG-mapper	UHGV-0026892_7	642492.Clole_0950	132.0	2.39e-37	N/A	N/A
structural_annotation	UHGV-0026892_7	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_14	phrog_757	69.7	2.7e-20	DNA methyltransferase	other
eggNOG-mapper	UHGV-0026892_14	428127.EUBDOL_01513	344.0	0	N/A	N/A
AcrCatalog	UHGV-0026892_14	cluster_47493	182.0	0	NA	N/A
structural_annotation	UHGV-0026892_14	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0026892_15	K02315	123.4	2.2e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0026892_15	phrog_50	109.6	3.1e-32	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026892_15	UniRef90_A0A395WER8	521.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-0026892_15	1211844.CBLM010000016_gene1509	137.0	1.59e-36	N/A	N/A
Pfam	UHGV-0026892_15	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-0026892_15	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0026892_15	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_16	phrog_428	150.8	8.40779e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0026892_16	UniRef90_A0A395WBX6	494.0	0	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0026892_16	1194526.A284_08025	142.0	1.81e-38	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-0026892_16	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0026892_16	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0026892_16	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0026892_16	PF09524,PF08679,MF_01909,TIGR02220,NF040939,COG1675	N/A	N/A	N/A	N/A
KOfam	UHGV-0026892_18	K04763	138.9	4.99997e-41	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0026892_18	phrog_1	121.8	6.5e-36	integrase	integration and excision
UniRef90	UHGV-0026892_18	UniRef90_A0A395W9T7	568.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0026892_18	908340.HMPREF9406_2589	233.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0026892_18	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026892_18	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0026892_18	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026892_21	UniRef90_UPI001D14AAA4	61.2	0.000000000287	N/A	N/A
KOfam	UHGV-0026892_24	K22300	65.4	1.1e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0026892_24	phrog_2967	59.7	4.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0026892_24	UniRef90_A0A395WA05	199.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026892_24	999413.HMPREF1094_02045	100.0	1.88e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0026892_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026892_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0026892_24	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_25	phrog_4980	123.0	1.2e-36	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0026892_25	UniRef90_UPI001E5F056E	102.0	5.36e-21	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0026892_25	658086.HMPREF0994_06731	89.0	3.29e-17	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0026892_25	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0026892_25	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0026892_25	PF18933,PF02631,MF_02248,MF_01114,NF008627,NF001062,COG5435,COG2137	N/A	N/A	N/A	N/A
KOfam	UHGV-0026892_26	K14059	198.4	0	int; integrase	N/A
PHROG	UHGV-0026892_26	phrog_1	177.4	0	integrase	integration and excision
UniRef90	UHGV-0026892_26	UniRef90_A0A395WBW7	739.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0026892_26	1235796.C815_00955	298.0	0	DNA integration	N/A
Pfam	UHGV-0026892_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0026892_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0026892_26	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0026892_27	K01447	68.0	1.6e-19	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0026892_27	phrog_7698	167.5	0	endolysin	lysis
UniRef90	UHGV-0026892_27	UniRef90_A0A413UF85	694.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0026892_27	1033733.CAEK01000007_gene1632	141.0	1.61e-36	Bacterial SH3 domain	N/A
Pfam	UHGV-0026892_27	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0026892_27	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-0026892_27	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0026892_27	PF01510,PF18342,PF08239,MF_04111,NF040670,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_29	phrog_443	55.6	0.0000000000000013	holin	lysis
UniRef90	UHGV-0026892_29	UniRef90_A0A2U2ELA1	79.0	6.71e-18	Membrane protein	N/A
eggNOG-mapper	UHGV-0026892_29	476272.RUMHYD_01759	82.4	6.55e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0026892_29	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0026892_29	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_31	phrog_20016	60.7	1.6e-17	N/A	unknown function
UniRef90	UHGV-0026892_31	UniRef90_A0A395WF88	258.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0026892_31	1226322.HMPREF1545_00077	59.7	0.00000000227	N/A	N/A
Pfam	UHGV-0026892_31	PF18573	N/A	N/A	BclA C-terminal domain	BclA_C
structural_annotation	UHGV-0026892_31	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026892_32	UniRef90_A0A8F0WFQ8	69.7	0.000000000103	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0026892_32	476272.RUMHYD_01770	114.0	1.27e-28	N/A	N/A
PHROG	UHGV-0026892_39	phrog_19280	95.4	3.9e-28	N/A	unknown function
UniRef90	UHGV-0026892_39	UniRef90_A0A413UF00	568.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026892_39	1160721.RBI_I01569	94.4	3.17e-18	N/A	N/A
Pfam	UHGV-0026892_39	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0026892_41	PF16407,TIGR02657,COG3794	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026892_42	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026892_43	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_44	phrog_1067	57.7	1.6e-24	minor head protein	head and packaging
eggNOG-mapper	UHGV-0026892_44	1232446.BAIE02000002_gene836	74.7	0.0000000000354	Phage minor structural protein	N/A
NCBIFam	UHGV-0026892_44	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0026892_44	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0026892_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026892_45	PF05939,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_46	phrog_13339	336.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0026892_46	UniRef90_A0A395WD11	1960.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0026892_46	411490.ANACAC_00710	253.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0026892_46	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0026892_46	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0026892_46	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0026892_46	PF10145,TIGR01760,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0026892_47	phrog_709	46.7	0.00000000000045	N/A	unknown function
structural_annotation	UHGV-0026892_47	PF11836	N/A	N/A	N/A	N/A