UHGV-0026894 (vOTU-033843)

Viral Genome: UHGV-0026894

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0026894
vOTU ID	vOTU-033843
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-E-H_H_11_1999__NODE_1379_length_27684_cov_5.534719
Associated Biosample	SAMEA4766139
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	66.22 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9738
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	37.47
Jumbo Phage?	No

Genome Content
Length (bps)	27,684
GC Content	40.46%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	38
CDS Density	93%
Average CDS Length (bps)	678.32
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 66.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0026894_1	K01356	101.7	3.6e-30	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0026894_1	phrog_4	146.7	1.09301e-43	transcriptional repressor	transcription regulation
UniRef90	UHGV-0026894_1	UniRef90_A0A1C6I863	579.0	0	HTH-type transcriptional regulator immR	N/A
eggNOG-mapper	UHGV-0026894_1	1160721.RBI_II00559	122.0	1.85e-30	Peptidase S24-like	N/A
PADLOC	UHGV-0026894_1	retron_type_VI_hth_cluster2_1	51.3	0.00000000000002	N/A	Retron
Pfam	UHGV-0026894_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0026894_1	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0026894_1	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0026894_1	PF00717,PF01381,MF_00015,TIGR00498,NF041951,COG1396,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0026894_2	K22299	41.4	0.000000000028	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0026894_2	UniRef90_A0A1C6I6F2	146.0	1.82169e-44	Anaerobic benzoate catabolism transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026894_2	718252.FP2_16270	63.5	0.00000000000312	sequence-specific DNA binding	N/A
Pfam	UHGV-0026894_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0026894_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0026894_2	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_5	phrog_310	380.0	0	transposase	integration and excision
UniRef90	UHGV-0026894_5	UniRef90_A0A413QHZ6	1205.0	0	MerR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0026894_5	445972.ANACOL_00518	697.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0026894_5	TnsB_0_V-K	57.9	1.2e-16	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0026894_5	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0026894_5	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0026894_5	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0026894_5	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0026894_6	K07132	69.6	4.2e-20	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0026894_6	phrog_296	137.8	8.69996e-41	DNA transposition protein	integration and excision
UniRef90	UHGV-0026894_6	UniRef90_A0A413QHD1	588.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0026894_6	1160721.RBI_II00554	219.0	0	AAA domain	N/A
Pfam	UHGV-0026894_6	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0026894_6	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0026894_6	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_8	phrog_5671	81.0	1.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0026894_8	552398.HMPREF0866_03130	114.0	5.74e-31	N/A	N/A
KOfam	UHGV-0026894_10	K06284	45.1	0.0000000000016	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0026894_10	phrog_4681	46.6	0.0000000000004	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0026894_10	UniRef90_A0A413QH66	172.0	0	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0026894_10	742733.HMPREF9469_02890	71.6	0.00000000000000185	toxin-antitoxin pair type II binding	N/A
NCBIFam	UHGV-0026894_10	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0026894_10	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0026894_10	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0026894_11	645991.Sgly_0760	99.0	8.55e-23	N/A	N/A
PHROG	UHGV-0026894_12	phrog_286	58.1	1.6e-16	N/A	unknown function
UniRef90	UHGV-0026894_12	UniRef90_A0A373KYV3	314.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026894_12	552398.HMPREF0866_03127	132.0	6.07e-37	N/A	N/A
Pfam	UHGV-0026894_12	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0026894_12	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_13	phrog_532	51.7	0.000000000000015	late transcriptional activator	transcription regulation
UniRef90	UHGV-0026894_13	UniRef90_A0A373L0N7	186.0	0	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-0026894_13	411483.FAEPRAA2165_03398	94.4	6.9e-24	Mor transcription activator family	N/A
Pfam	UHGV-0026894_13	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0026894_13	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0026894_13	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_14	phrog_462	42.4	0.00000000000065	lipoprotein	other
PHROG	UHGV-0026894_15	phrog_25462	109.0	2.1e-32	N/A	unknown function
UniRef90	UHGV-0026894_15	UniRef90_A0A413QHC4	213.0	0	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-0026894_15	1160721.RBI_II00547	101.0	2.19e-26	N/A	N/A
structural_annotation	UHGV-0026894_15	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_16	phrog_426	94.2	1.5e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0026894_16	UniRef90_A0A373L007	302.0	0	N/A	N/A
eggNOG-mapper	UHGV-0026894_16	411902.CLOBOL_06314	160.0	0	N/A	N/A
Pfam	UHGV-0026894_16	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0026894_16	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-0026894_17	K02601	94.8	8.9e-28	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-0026894_17	phrog_6386	93.0	2.7e-27	transcription antiterminator	transcription regulation
UniRef90	UHGV-0026894_17	UniRef90_A0A413QHD3	327.0	0	NGN domain-containing protein	N/A
eggNOG-mapper	UHGV-0026894_17	1304880.JAGB01000001_gene953	58.9	0.0000000168	antitermination protein NusG	N/A
Pfam	UHGV-0026894_17	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0026894_17	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0026894_17	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
KOfam	UHGV-0026894_19	K06909	123.0	3.1e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0026894_19	phrog_2	151.6	7.00649e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0026894_19	UniRef90_A0A373L0G3	821.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0026894_19	693746.OBV_18030	462.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0026894_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0026894_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0026894_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0026894_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_20	phrog_533	329.3	0	portal protein	head and packaging
UniRef90	UHGV-0026894_20	UniRef90_A0A3D0XCF1	910.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0026894_20	411490.ANACAC_00782	344.0	0	N/A	N/A
structural_annotation	UHGV-0026894_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_21	phrog_581	324.1	0	minor head protein	head and packaging
UniRef90	UHGV-0026894_21	UniRef90_A0A1C6IA10	735.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0026894_21	663278.Ethha_0091	420.0	0	N/A	N/A
Pfam	UHGV-0026894_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0026894_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0026894_21	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_23	phrog_194	77.3	4e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0026894_23	UniRef90_UPI001967FAB3	100.0	2.72e-23	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0026894_23	1401067.HMPREF0872_00300	62.4	0.00000000181	Phage minor structural protein GP20	N/A
Pfam	UHGV-0026894_23	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0026894_23	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_24	phrog_212	223.0	0	major head protein	head and packaging
UniRef90	UHGV-0026894_24	UniRef90_A0A373KYA5	630.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0026894_24	935836.JAEL01000021_gene1494	359.0	0	N/A	N/A
structural_annotation	UHGV-0026894_24	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_25	phrog_541	98.6	4.1e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0026894_25	658655.HMPREF0988_02559	69.7	0.000000000000125	N/A	N/A
PHROG	UHGV-0026894_26	phrog_3366	76.7	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0026894_26	545697.HMPREF0216_02852	51.2	0.0000034	N/A	N/A
Pfam	UHGV-0026894_26	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0026894_26	PF20536,TIGR01563,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_27	phrog_556	99.5	2.2e-29	minor head protein	head and packaging
UniRef90	UHGV-0026894_27	UniRef90_A0A413QH49	235.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0026894_27	883114.HMPREF9709_01190	126.0	6.91e-36	Minor capsid protein	N/A
Pfam	UHGV-0026894_27	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0026894_27	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_28	phrog_3266	151.4	1.4013e-45	tail completion	connector
UniRef90	UHGV-0026894_28	UniRef90_A0A373KYC6	274.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0026894_28	641112.ACOK01000073_gene2899	111.0	2.16e-29	N/A	N/A
structural_annotation	UHGV-0026894_28	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_29	phrog_3099	186.1	0	N/A	unknown function
UniRef90	UHGV-0026894_29	UniRef90_A0A3P6KYP0	170.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0026894_29	411490.ANACAC_00772	186.0	0	N/A	N/A
structural_annotation	UHGV-0026894_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_30	phrog_4450	94.9	7e-28	N/A	unknown function
UniRef90	UHGV-0026894_30	UniRef90_A0A413QHF8	265.0	0	AP endonuclease	N/A
eggNOG-mapper	UHGV-0026894_30	1280692.AUJL01000004_gene838	87.4	1.61e-20	N/A	N/A
Pfam	UHGV-0026894_30	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0026894_30	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_31	phrog_706	158.6	0	N/A	unknown function
UniRef90	UHGV-0026894_31	UniRef90_A0A1G4WU45	188.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0026894_31	1499683.CCFF01000017_gene2567	167.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0026894_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0026894_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_32	phrog_37750	42.8	0.0000000000043	N/A	unknown function
UniRef90	UHGV-0026894_32	UniRef90_A0A1G4WVI6	94.0	1.52e-22	Beta-lactamase inhibitor (BLIP)	N/A
eggNOG-mapper	UHGV-0026894_32	1280390.CBQR020000086_gene1875	53.5	0.000000268	N/A	N/A
PHROG	UHGV-0026894_33	phrog_19074	479.3	0	N/A	unknown function
UniRef90	UHGV-0026894_33	UniRef90_A0A373L0L9	1837.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0026894_33	33035.JPJF01000033_gene2265	414.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0026894_33	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0026894_33	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0026894_33	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0026894_33	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-0026894_34	UniRef90_A0A1G4WVH7	188.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0026894_34	1347392.CCEZ01000045_gene7	60.8	0.000000026	phage tail	N/A
COG	UHGV-0026894_34	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0026894_34	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_35	phrog_18110	210.7	0	N/A	unknown function
UniRef90	UHGV-0026894_35	UniRef90_A0A373KYA3	1139.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0026894_35	903814.ELI_3101	158.0	9.5e-38	Phage minor structural protein	N/A
Pfam	UHGV-0026894_35	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0026894_35	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0026894_35	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0026894_35	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0026894_37	phrog_11105	43.5	0.0000000000043	N/A	unknown function
UniRef90	UHGV-0026894_38	UniRef90_A0A1C6HHE5	510.0	0	BppU_N domain-containing protein	N/A
Pfam	UHGV-0026894_38	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N