UHGV-0029044 (vOTU-003869)

Viral Genome: UHGV-0029044

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0029044
vOTU ID	vOTU-003869
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_G_3_2391__NODE_766_length_59288_cov_7.342335
Associated Biosample	SAMEA4766271
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9784
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.65
Jumbo Phage?	No

Genome Content
Length (bps)	59,211
GC Content	49.24%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	78
CDS Density	92%
Average CDS Length (bps)	698.00
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0029044_2	PF02185,NF012003	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_3	phrog_606	52.3	0.000000000000011	terminase small subunit	head and packaging
UniRef90	UHGV-0029044_3	UniRef90_UPI001D088AD3	68.9	0.00000000000591	DNA-packaging protein	N/A
Pfam	UHGV-0029044_3	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0029044_3	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_4	K06909	286.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0029044_4	phrog_3717	200.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0029044_4	UniRef90_UPI001C30E6F9	435.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0029044_4	696281.Desru_1088	417.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0029044_4	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0029044_4	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0029044_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0029044_4	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_7	phrog_156	107.8	1e-31	portal protein	head and packaging
eggNOG-mapper	UHGV-0029044_7	588581.Cpap_1526	282.0	0	N/A	N/A
structural_annotation	UHGV-0029044_7	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_9	phrog_14242	91.6	6.2e-27	major head protein	head and packaging
UniRef90	UHGV-0029044_9	UniRef90_A0A3D2CI53	308.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0029044_9	935948.KE386495_gene2267	56.2	0.00000913	N/A	N/A
NCBIFam	UHGV-0029044_9	NF033394.1	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0029044_9	PF17236,MF_04133,NF033394,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029044_11	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029044_12	1449126.JQKL01000002_gene1688	94.7	4.9e-18	N/A	N/A
structural_annotation	UHGV-0029044_12	PF11134,NF038128,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029044_15	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_16	phrog_13589	44.1	0.0000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0029044_16	411471.SUBVAR_06929	66.6	0.0000000000735	ATPase involved in DNA repair	N/A
COG	UHGV-0029044_16	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0029044_17	phrog_24060	159.5	0	N/A	unknown function
UniRef90	UHGV-0029044_17	UniRef90_A0A1S1V8R5	208.0	0	N/A	N/A
eggNOG-mapper	UHGV-0029044_17	1226322.HMPREF1545_03571	176.0	0	cellulose binding	N/A
Pfam	UHGV-0029044_17	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0029044_17	COG4447	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029044_17	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_18	phrog_19111	41.6	3.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0029044_18	696281.Desru_1098	57.0	0.00000322	ATPase involved in DNA repair	N/A
COG	UHGV-0029044_18	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0029044_19	phrog_5073	50.4	0.000000000000031	tail fiber protein	tail
Pfam	UHGV-0029044_19	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0029044_21	phrog_4105	73.0	3.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0029044_21	610130.Closa_0762	77.0	7.06e-17	N/A	N/A
PHROG	UHGV-0029044_22	phrog_918	117.7	3.8e-35	N/A	unknown function
UniRef90	UHGV-0029044_22	UniRef90_UPI000978D6F5	110.0	6.05e-30	N/A	N/A
eggNOG-mapper	UHGV-0029044_22	469618.FVAG_01307	98.2	7.6e-26	N/A	N/A
Pfam	UHGV-0029044_22	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0029044_22	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_23	K19304	113.9	1.9e-33	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0029044_23	phrog_7767	100.9	8.7e-30	metallo-endopeptidase	other
UniRef90	UHGV-0029044_23	UniRef90_A0A7V9P003	72.4	0.000000000162	Peptidoglycan DD-metalloendopeptidase family protein	N/A
eggNOG-mapper	UHGV-0029044_23	1121864.OMO_01118	99.0	1.5e-19	Peptidase family M23	N/A
Pfam	UHGV-0029044_23	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0029044_23	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0029044_23	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029044_25	1121334.KB911071_gene1966	53.5	0.0000000228	N/A	N/A
PHROG	UHGV-0029044_26	phrog_3754	106.0	3.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0029044_26	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-0029044_27	phrog_21718	73.4	2.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0029044_27	397290.C810_05210	70.5	0.000000000000562	N/A	N/A
PHROG	UHGV-0029044_28	phrog_22984	69.1	6.2e-20	N/A	unknown function
PHROG	UHGV-0029044_29	phrog_16490	118.9	3e-36	N/A	unknown function
UniRef90	UHGV-0029044_29	UniRef90_A0A7M1S0F9	65.5	0.00000000928	Spike protein/glycoprotein	N/A
eggNOG-mapper	UHGV-0029044_29	1408437.JNJN01000043_gene803	105.0	1.34e-24	N/A	N/A
PHROG	UHGV-0029044_30	phrog_20016	198.9	0	N/A	unknown function
UniRef90	UHGV-0029044_30	UniRef90_A0A2Z4QB67	181.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0029044_30	1226322.HMPREF1545_00077	178.0	0	N/A	N/A
structural_annotation	UHGV-0029044_30	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029044_31	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_33	K14060	116.7	2.4e-34	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0029044_33	phrog_125	159.9	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_33	UniRef90_UPI00164B5EE1	171.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0029044_33	877420.ATVW01000008_gene521	169.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0029044_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0029044_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0029044_33	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_34	phrog_2172	130.5	8.5e-39	N/A	unknown function
UniRef90	UHGV-0029044_34	UniRef90_W1I1M7	163.0	1.4013e-45	Uncultured bacterium plasmid pRGI00069	N/A
eggNOG-mapper	UHGV-0029044_34	1410612.JNKO01000012_gene574	147.0	5.87e-40	Initiator Replication protein	N/A
Pfam	UHGV-0029044_34	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0029044_34	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0029044_34	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0029044_34	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_38	phrog_14770	84.9	0	N/A	unknown function
UniRef90	UHGV-0029044_38	UniRef90_UPI001BB47D0E	1588.0	0	strawberry notch family protein	N/A
eggNOG-mapper	UHGV-0029044_38	1123288.SOV_4c02780	1185.0	0	protein secretion by the type IV secretion system	N/A
Pfam	UHGV-0029044_38	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0029044_38	PF13872	N/A	N/A	P-loop containing NTP hydrolase pore-1	AAA_34
Pfam	UHGV-0029044_38	PF13871	N/A	N/A	C-terminal domain on Strawberry notch homologue	Helicase_C_4
Pfam	UHGV-0029044_38	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0029044_38	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-0029044_41	K03111	132.9	3.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0029044_41	phrog_44	126.9	6.2e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_41	UniRef90_R7EVC4	146.0	7.11019e-42	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0029044_41	445972.ANACOL_04434	125.0	1.55e-34	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0029044_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0029044_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0029044_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0029044_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0029044_41	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_42	K01160	46.5	0.000000000001	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0029044_42	phrog_4632	54.4	1.3e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_42	UniRef90_A0A7X8IB41	116.0	3.82e-31	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0029044_42	469604.HMPREF0946_01097	69.3	0.000000000000177	N/A	N/A
structural_annotation	UHGV-0029044_42	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_43	phrog_474	106.0	5.5e-31	phosphofructokinase	other
UniRef90	UHGV-0029044_43	UniRef90_A0A3C1WR20	95.9	2.18e-23	N/A	N/A
eggNOG-mapper	UHGV-0029044_43	1203606.HMPREF1526_00237	79.7	9e-18	N/A	N/A
Pfam	UHGV-0029044_43	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0029044_43	PF19905	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_44	K01520	140.4	1.40004e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0029044_44	phrog_135	128.9	2.8e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_44	UniRef90_UPI00164A78A3	167.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0029044_44	1282887.AUJG01000016_gene1113	155.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0029044_44	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0029044_44	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0029044_44	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0029044_44	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_45	K01493	99.6	4.3e-29	comEB; dCMP deaminase [EC:3.5.4.12]	N/A
PHROG	UHGV-0029044_45	phrog_174	118.1	4.1e-35	dCMP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_45	UniRef90_R5PNF2	189.0	0	CMP/dCMP deaminase	N/A
eggNOG-mapper	UHGV-0029044_45	634498.mru_1286	173.0	0	deaminase	N/A
Pfam	UHGV-0029044_45	PF00383	N/A	N/A	Cytidine and deoxycytidylate deaminase zinc-binding region	dCMP_cyt_deam_1
COG	UHGV-0029044_45	COG2131	N/A	N/A	Deoxycytidylate deaminase	N/A
structural_annotation	UHGV-0029044_45	PF00383,TIGR02571,COG2131	N/A	N/A	N/A	N/A
Pfam	UHGV-0029044_47	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0029044_47	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_48	phrog_1384	73.1	4.2e-21	Mom-like DNA modification protein	other
UniRef90	UHGV-0029044_48	UniRef90_A0A0K2CZB3	154.0	1.4013e-45	Acetyltransferase	N/A
eggNOG-mapper	UHGV-0029044_48	1121468.AUBR01000007_gene285	87.4	1.53e-19	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0029044_48	PF11039,MF_02210,NF040503,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_53	phrog_757	122.8	1.9e-36	DNA methyltransferase	other
UniRef90	UHGV-0029044_53	UniRef90_A0A374BFJ7	185.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0029044_53	397290.C810_01487	154.0	1.4013e-44	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0029044_53	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
UniRef90	UHGV-0029044_55	UniRef90_A0A098GES5	112.0	3.22e-30	Putative phage associated protein	N/A
structural_annotation	UHGV-0029044_55	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_56	phrog_7711	111.9	3.9e-33	N/A	unknown function
UniRef90	UHGV-0029044_56	UniRef90_UPI001C38CAD2	108.0	8.94e-27	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0029044_56	1304866.K413DRAFT_1204	124.0	6.06e-35	N/A	N/A
PHROG	UHGV-0029044_57	phrog_6721	208.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0029044_57	537007.BLAHAN_05521	183.0	0	N/A	N/A
structural_annotation	UHGV-0029044_57	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_62	phrog_9804	106.9	1.8e-31	N/A	unknown function
UniRef90	UHGV-0029044_62	UniRef90_A0A3D1LDS2	110.0	8.1e-27	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0029044_62	1499683.CCFF01000013_gene503	84.0	1.79e-17	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0029044_62	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0029044_62	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_63	phrog_270	112.6	4.6e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0029044_63	945021.TEH_18370	100.0	1.15e-22	Helix-turn-helix domain	N/A
COG	UHGV-0029044_63	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
PHROG	UHGV-0029044_64	phrog_72	54.5	0.0000000000000015	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_64	UniRef90_A0A8D9PDS2	152.0	1.02295e-43	NinB protein	N/A
eggNOG-mapper	UHGV-0029044_64	445972.ANACOL_01825	139.0	3.04e-39	N/A	N/A
structural_annotation	UHGV-0029044_64	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_65	phrog_2205	116.8	1.2e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_65	UniRef90_A0A4R7KUW2	99.8	4.1e-23	Gam-like protein	N/A
eggNOG-mapper	UHGV-0029044_65	1203606.HMPREF1526_01878	92.0	1.27e-20	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0029044_65	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-0029044_65	PF07352	N/A	N/A	N/A	N/A
PHROG	UHGV-0029044_66	phrog_7838	146.5	1.79366e-43	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029044_66	UniRef90_A0A8D9UGW3	209.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0029044_66	742767.HMPREF9456_02052	171.0	0	N/A	N/A
structural_annotation	UHGV-0029044_66	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_72	K22300	61.6	1.9e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0029044_72	phrog_4	42.6	0.000000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-0029044_72	UniRef90_R9K5V7	96.3	2.75e-23	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0029044_72	397290.C810_05152	96.3	4.61e-24	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0029044_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029044_72	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0029044_72	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0029044_73	K07729	57.1	4e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0029044_73	phrog_3	53.0	0.000000000000014	transcriptional repressor	transcription regulation
UniRef90	UHGV-0029044_73	UniRef90_UPI00093EC697	52.8	0.00000228	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0029044_73	1316408.HSISM1_2145	49.7	0.00000602	Transcriptional	N/A
PADLOC	UHGV-0029044_73	retron_type_VI_hth_cluster2_1	45.2	0.0000000000021	N/A	Retron
Pfam	UHGV-0029044_73	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0029044_73	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0029044_73	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029044_75	715451.ambt_14505	59.3	0.000000637	N/A	N/A
COG	UHGV-0029044_77	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0029044_77	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A