UHGV-0030755 (vOTU-044089)

Viral Genome: UHGV-0030755

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0030755
vOTU ID	vOTU-044089
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_J_9_1249__NODE_1714_length_38634_cov_31.943097
Associated Biosample	SAMEA4765703
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9789
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	3.25
Jumbo Phage?	No

Genome Content
Length (bps)	38,557
GC Content	57.41%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	52
CDS Density	90%
Average CDS Length (bps)	668.83
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0030755_1	693746.OBV_01760	46.2	0.00000478	N/A	N/A
PHROG	UHGV-0030755_2	phrog_15863	165.3	0	N/A	unknown function
UniRef90	UHGV-0030755_2	UniRef90_A0A810QAR9	291.0	0	Molecular chaperone DnaJ	N/A
eggNOG-mapper	UHGV-0030755_2	693746.OBV_01780	248.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0030755_2	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0030755_3	phrog_32772	115.9	1.2e-34	N/A	unknown function
structural_annotation	UHGV-0030755_3	NF010188,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_4	PF17917	N/A	N/A	N/A	N/A
KOfam	UHGV-0030755_5	K14059	210.8	0	int; integrase	N/A
PHROG	UHGV-0030755_5	phrog_1	199.6	0	integrase	integration and excision
UniRef90	UHGV-0030755_5	UniRef90_K1T0Q2	738.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-0030755_5	1519439.JPJG01000011_gene49	315.0	0	Phage integrase family	N/A
Pfam	UHGV-0030755_5	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0030755_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0030755_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0030755_5	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030755_6	477974.Daud_0794	58.9	0.000000228	PFAM nuclease (SNase	N/A
COG	UHGV-0030755_6	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
Pfam	UHGV-0030755_7	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0030755_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0030755_7	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0030755_8	K07727	45.4	0.0000000000017	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0030755_8	UniRef90_A0A374HXY0	55.5	0.000000349	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0030755_8	742738.HMPREF9460_02485	56.6	0.000000023	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0030755_8	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0030755_8	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0030755_10	K07741	218.0	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0030755_10	phrog_63	179.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0030755_10	UniRef90_A0A7I8D1Y4	319.0	0	Putative P1-type antirepressor - phage associated	N/A
eggNOG-mapper	UHGV-0030755_10	1123263.AUKY01000076_gene1778	315.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0030755_10	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0030755_10	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0030755_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0030755_10	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_11	PF12728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_12	PF18359,COG4466	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_14	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_16	phrog_298	66.9	1.8e-20	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030755_16	UniRef90_UPI00058C5410	103.0	2e-24	PD-(D/E)XK nuclease family protein	N/A
COG	UHGV-0030755_16	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0030755_16	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_17	phrog_10048	77.5	3.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0030755_17	1111134.HMPREF1253_1200	108.0	1.01e-25	N/A	N/A
structural_annotation	UHGV-0030755_17	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030755_18	UniRef90_A0A4D7AYE9	101.0	8.03e-25	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0030755_18	PF00436,MF_00984,TIGR04418,COG2965	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_19	PF11417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_21	PF21485	N/A	N/A	N/A	N/A
KOfam	UHGV-0030755_23	K01160	46.7	0.00000000000072	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0030755_23	phrog_4632	65.7	4.8e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030755_23	UniRef90_A0A7X8IB41	120.0	4.61e-32	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0030755_23	469604.HMPREF0946_00819	63.2	0.000000000155	N/A	N/A
structural_annotation	UHGV-0030755_23	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0030755_26	K00390	105.1	7.2e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0030755_26	phrog_424	108.4	5.9e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0030755_26	UniRef90_UPI001D087498	385.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0030755_26	411902.CLOBOL_06768	272.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0030755_26	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0030755_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0030755_26	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_28	phrog_954	189.3	0	DNA methyltransferase	other
UniRef90	UHGV-0030755_28	UniRef90_A0A810Q0N4	323.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0030755_28	1280698.AUJS01000007_gene1028	266.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0030755_28	MTase_II_00074	197.7	0	Type II methyltransferase	RM
Pfam	UHGV-0030755_28	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0030755_28	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0030755_28	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_30	phrog_38832	41.1	0.000000000011	N/A	unknown function
dbAPIS	UHGV-0030755_30	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0030755_30	PF07073	N/A	N/A	N/A	N/A
KOfam	UHGV-0030755_32	K02647	46.8	0.00000000000033	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-0030755_32	UniRef90_K1SN71	118.0	9.63e-34	HTH_30 domain-containing protein	N/A
eggNOG-mapper	UHGV-0030755_32	1122917.KB899661_gene912	56.6	0.0000000164	Putative sugar diacid recognition	N/A
Pfam	UHGV-0030755_32	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-0030755_32	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0030755_32	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030755_33	UniRef90_A0A3A9FC54	68.6	0.0000000000000825	Sigma-70 family RNA polymerase sigma factor	N/A
structural_annotation	UHGV-0030755_33	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030755_37	UniRef90_A0A810QFN4	1295.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0030755_37	693746.OBV_01590	641.0	0	N/A	N/A
Pfam	UHGV-0030755_37	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
eggNOG-mapper	UHGV-0030755_38	693746.OBV_01600	174.0	2.8026e-45	N/A	N/A
KOfam	UHGV-0030755_39	K08640	97.4	1.8e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0030755_39	phrog_18955	151.0	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0030755_39	UniRef90_UPI001C035E39	612.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0030755_39	1235797.C816_04171	340.0	0	Peptidase M15	N/A
Pfam	UHGV-0030755_39	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0030755_39	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0030755_39	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030755_39	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_40	phrog_199	90.0	2.1e-26	holin	lysis
UniRef90	UHGV-0030755_40	UniRef90_K1UL76	297.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-0030755_40	411467.BACCAP_00280	142.0	1.78007e-41	Bacteriophage holin family	N/A
Pfam	UHGV-0030755_40	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0030755_40	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0030755_40	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0030755_40	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_42	phrog_37900	88.1	1e-27	N/A	unknown function
UniRef90	UHGV-0030755_42	UniRef90_UPI00051B4A1C	307.0	0	N/A	N/A
eggNOG-mapper	UHGV-0030755_42	1519439.JPJG01000060_gene1894	307.0	0	N/A	N/A
Pfam	UHGV-0030755_42	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0030755_42	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0030755_42	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_43	phrog_17134	46.9	0.0000000000001	N/A	unknown function
PHROG	UHGV-0030755_44	phrog_156	106.3	2.5e-33	portal protein	head and packaging
eggNOG-mapper	UHGV-0030755_44	693746.OBV_01670	778.0	0	N/A	N/A
structural_annotation	UHGV-0030755_44	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030755_45	UniRef90_A0A4D7ASB8	786.0	0	N/A	N/A
eggNOG-mapper	UHGV-0030755_45	693746.OBV_01680	737.0	0	N/A	N/A
structural_annotation	UHGV-0030755_45	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-0030755_46	K06909	139.9	2.09999e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0030755_46	phrog_979	146.5	8.40779e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0030755_46	UniRef90_K1SF61	772.0	0	Terminase-like protein (Fragment)	N/A
eggNOG-mapper	UHGV-0030755_46	693746.OBV_01690	686.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0030755_46	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0030755_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0030755_46	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0030755_47	phrog_422	131.1	7.9e-39	major head protein	head and packaging
UniRef90	UHGV-0030755_47	UniRef90_K1TJJ5	457.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-0030755_47	693746.OBV_01700	559.0	0	N/A	N/A
Pfam	UHGV-0030755_47	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0030755_47	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030755_49	UniRef90_A0A4D7B2L2	62.4	0.0000000000128	Cysteine-rich KTR domain-containing protein	N/A
Pfam	UHGV-0030755_49	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0030755_49	PF14205,COG4416	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030755_50	1519439.JPJG01000011_gene57	133.0	5.72e-38	N/A	N/A
structural_annotation	UHGV-0030755_50	PF11650	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030755_52	693746.OBV_01750	113.0	9.17e-30	N/A	N/A