UHGV-0031503 (vOTU-034611)

Viral Genome: UHGV-0031503

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0031503
vOTU ID	vOTU-034611
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_K_1_2479__NODE_1882_length_32075_cov_4.365179
Associated Biosample	SAMEA4766290
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	75.49 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9749
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	19.9
Jumbo Phage?	No

Genome Content
Length (bps)	32,075
GC Content	44.22%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	43
CDS Density	95%
Average CDS Length (bps)	708.84
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0031503_1	1160721.RBI_I01702	66.2	0.000000107	N/A	N/A
Pfam	UHGV-0031503_1	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-0031503_1	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
UniRef90	UHGV-0031503_2	UniRef90_A0A1V5RXD7	147.0	8.62e-37	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0031503_2	1410650.JHWL01000003_gene2815	127.0	5.53e-30	N/A	N/A
PHROG	UHGV-0031503_3	phrog_372	208.7	0	tail protein	tail
UniRef90	UHGV-0031503_3	UniRef90_A0A3E3E6C0	218.0	0	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0031503_3	908340.HMPREF9406_0178	168.0	7.63988e-42	N/A	N/A
COG	UHGV-0031503_3	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0031503_3	PF05895,MF_04116,NF010681,COG3291,COG5608	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031503_4	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_5	phrog_511	256.7	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0031503_5	1410650.JHWL01000003_gene2827	368.0	0	N/A	N/A
structural_annotation	UHGV-0031503_5	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_6	phrog_12105	130.6	6.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0031503_6	1519439.JPJG01000060_gene1891	76.3	3.69e-16	N/A	N/A
PHROG	UHGV-0031503_7	phrog_15239	50.3	0.000000000000038	N/A	unknown function
PHROG	UHGV-0031503_8	phrog_1357	276.1	0	major head protein	head and packaging
UniRef90	UHGV-0031503_8	UniRef90_A0A2V2GQW4	426.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0031503_8	748224.HMPREF9436_01399	363.0	0	N/A	N/A
Pfam	UHGV-0031503_8	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0031503_8	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0031503_8	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_9	phrog_13908	301.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0031503_9	1410650.JHWL01000003_gene2831	153.0	1.68002e-41	N/A	N/A
KOfam	UHGV-0031503_10	K07584	55.2	0.0000000000000014	N/A	N/A
PHROG	UHGV-0031503_10	phrog_4478	53.9	0.0000000000000024	peptidase	other
UniRef90	UHGV-0031503_10	UniRef90_A0A7C6PXD1	57.4	0.0000000254	Ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0031503_10	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0031503_10	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031503_10	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_13	phrog_156	313.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0031503_13	1410650.JHWL01000003_gene2833	609.0	0	N/A	N/A
structural_annotation	UHGV-0031503_13	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0031503_14	K06909	139.3	3.69999e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0031503_14	phrog_979	140.6	4.1058e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0031503_14	UniRef90_A0A2V2GR60	659.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0031503_14	1410650.JHWL01000003_gene2834	627.0	0	N/A	N/A
Pfam	UHGV-0031503_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0031503_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0031503_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_15	phrog_1206	40.3	0.0000000000063	terminase small subunit	head and packaging
UniRef90	UHGV-0031503_15	UniRef90_A0A3C0NNN3	62.4	0.00000000305	HTH psq-type domain-containing protein	N/A
Pfam	UHGV-0031503_15	PF05225	N/A	N/A	helix-turn-helix, Psq domain	HTH_psq
PHROG	UHGV-0031503_16	phrog_190	128.6	4.2e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031503_16	UniRef90_A0A6N7XIA3	126.0	1.84e-35	N/A	N/A
eggNOG-mapper	UHGV-0031503_16	742767.HMPREF9456_03412	106.0	2.21e-28	N/A	N/A
Pfam	UHGV-0031503_16	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0031503_16	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_18	phrog_9804	73.3	2.7e-21	N/A	unknown function
UniRef90	UHGV-0031503_18	UniRef90_A0A8D9PDS1	69.7	0.00000000000115	Replisome organizer	N/A
eggNOG-mapper	UHGV-0031503_18	1121344.JHZO01000003_gene981	62.8	0.000000000264	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0031503_18	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0031503_18	PF11417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0031503_21	PF17384	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_23	phrog_3136	126.9	8.4e-38	N/A	unknown function
UniRef90	UHGV-0031503_23	UniRef90_UPI001CBCD733	126.0	1.25e-33	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0031503_23	1235793.C809_02645	71.2	0.00000000000202	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0031503_23	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0031503_23	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_25	phrog_8489	248.0	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031503_25	UniRef90_UPI001D0B3316	225.0	0	replisome organizer	N/A
eggNOG-mapper	UHGV-0031503_25	1111134.HMPREF1253_0213	217.0	0	DnaD domain protein	N/A
COG	UHGV-0031503_25	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0031503_25	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0031503_26	K17398	70.9	1.3e-31	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-0031503_26	phrog_17284	172.7	0	N/A	unknown function
UniRef90	UHGV-0031503_26	UniRef90_A0A350XVB1	485.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0031503_26	1291050.JAGE01000001_gene476	407.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0031503_26	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0031503_26	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0031503_26	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0031503_27	K03111	150.2	1.96182e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0031503_27	phrog_44	150.2	1.12104e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031503_27	UniRef90_A0A316Q8B3	157.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0031503_27	386415.NT01CX_0884	150.0	4.2039e-45	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0031503_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0031503_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0031503_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0031503_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0031503_27	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_28	phrog_4973	49.7	0.00000000000006	N/A	unknown function
UniRef90	UHGV-0031503_28	UniRef90_UPI00164C43FE	67.0	0.000000000000405	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0031503_28	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0031503_28	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0031503_29	K07455	297.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0031503_29	phrog_148	279.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031503_29	UniRef90_A0A3D3Y007	402.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0031503_29	1226322.HMPREF1545_00015	347.0	0	RecT family	N/A
Pfam	UHGV-0031503_29	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0031503_29	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0031503_29	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0031503_29	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_30	phrog_434	294.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0031503_30	UniRef90_A0A3D3XZF3	392.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0031503_30	1121344.JHZO01000003_gene985	265.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0031503_30	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0031503_30	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0031503_30	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0031503_30	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031503_36	UniRef90_A0A0X3Y2X4	72.8	0.0000000000000961	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0031503_36	756499.Desde_3141	57.0	0.000000171	Bacterial Ig-like domain 2	N/A
NCBIFam	UHGV-0031503_36	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-0031503_36	COG5492	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031503_37	UniRef90_A0A2A7B943	89.0	5.25e-22	BetR domain-containing protein	N/A
eggNOG-mapper	UHGV-0031503_37	642492.Clole_2800	47.4	0.00000252	N/A	N/A
Pfam	UHGV-0031503_37	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0031503_37	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0031503_38	K22299	59.5	8.1e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0031503_38	phrog_8	73.6	4.2e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0031503_38	UniRef90_UPI000E6A171B	105.0	3.73e-27	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0031503_38	1292035.H476_1037	89.0	5.87e-21	sequence-specific DNA binding	N/A
Pfam	UHGV-0031503_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0031503_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0031503_38	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0031503_39	phrog_87	69.3	4.7e-20	metallo-protease	other
UniRef90	UHGV-0031503_39	UniRef90_UPI00195CA9DE	69.3	0.00000000000198	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0031503_39	515635.Dtur_1293	57.0	0.0000000217	Zn peptidase	N/A
Pfam	UHGV-0031503_39	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0031503_39	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0031503_39	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0031503_40	K14059	220.7	0	int; integrase	N/A
PHROG	UHGV-0031503_40	phrog_1	205.3	0	integrase	integration and excision
UniRef90	UHGV-0031503_40	UniRef90_UPI0008345DF0	251.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0031503_40	1507.HMPREF0262_00307	191.0	0	Phage integrase family	N/A
Pfam	UHGV-0031503_40	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0031503_40	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0031503_40	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0031503_40	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0031503_41	1007096.BAGW01000014_gene1116	114.0	1.38e-28	N/A	N/A
eggNOG-mapper	UHGV-0031503_42	742735.HMPREF9467_02748	85.5	8.67e-18	N/A	N/A
structural_annotation	UHGV-0031503_42	PF19552	N/A	N/A	N/A	N/A
UniRef90	UHGV-0031503_43	UniRef90_A0A174Z442	509.0	0	Antirestriction protein (ArdA)	N/A
eggNOG-mapper	UHGV-0031503_43	1131462.DCF50_p1378	148.0	1.29e-38	N/A	N/A
Pfam	UHGV-0031503_43	PF07275	N/A	N/A	Antirestriction protein (ArdA)	ArdA
structural_annotation	UHGV-0031503_43	PF07275	N/A	N/A	N/A	N/A