UHGV-0033275 (vOTU-063610)

Viral Genome: UHGV-0033275

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0033275
vOTU ID	vOTU-063610
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_O_11_2507__NODE_4245_length_33152_cov_7.495359
Associated Biosample	SAMEA4766318
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	93.26 (High-quality)
Trimmed?	No
CheckV Viral Markers	22
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9777
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	52.34
Jumbo Phage?	No

Genome Content
Length (bps)	33,152
GC Content	58.92%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	40
CDS Density	94%
Average CDS Length (bps)	776.18
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0033275_1	phrog_9534	301.4	0	head protein	head and packaging
eggNOG-mapper	UHGV-0033275_1	748224.HMPREF9436_00702	310.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0033275_1	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_2	phrog_538	204.8	0	minor tail protein	tail
UniRef90	UHGV-0033275_2	UniRef90_UPI0011064D4D	112.0	9.16e-25	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0033275_2	748224.HMPREF9436_03324	641.0	0	N/A	N/A
Pfam	UHGV-0033275_2	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0033275_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_3	phrog_33	44.3	0.0000000000034	distal tail protein Dit	tail
UniRef90	UHGV-0033275_3	UniRef90_UPI00130E98E0	295.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0033275_3	748224.HMPREF9436_03325	572.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0033275_3	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_4	phrog_28775	962.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0033275_4	UniRef90_A0A2J4JRN1	1167.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033275_4	748224.HMPREF9436_03326	406.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0033275_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0033275_4	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0033275_4	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0033275_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_5	phrog_706	124.7	6.1e-37	N/A	unknown function
UniRef90	UHGV-0033275_5	UniRef90_E2ZNP9	400.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0033275_5	748224.HMPREF9436_03328	400.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0033275_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0033275_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_6	phrog_4450	161.5	0	N/A	unknown function
structural_annotation	UHGV-0033275_6	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_7	phrog_820	116.1	1.8e-34	major tail protein	tail
eggNOG-mapper	UHGV-0033275_7	748224.HMPREF9436_03330	342.0	0	N/A	N/A
structural_annotation	UHGV-0033275_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_8	phrog_3266	149.8	7.00649e-45	tail completion	connector
UniRef90	UHGV-0033275_8	UniRef90_UPI001F2730AA	86.3	1.05e-18	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0033275_8	748224.HMPREF9436_03331	305.0	0	N/A	N/A
structural_annotation	UHGV-0033275_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_9	phrog_556	86.5	2.1e-25	minor head protein	head and packaging
UniRef90	UHGV-0033275_9	UniRef90_A0A2A6Z736	219.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0033275_9	748224.HMPREF9436_03332	233.0	0	Minor capsid protein	N/A
Pfam	UHGV-0033275_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0033275_9	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_10	phrog_3366	114.3	7.6e-34	N/A	unknown function
structural_annotation	UHGV-0033275_10	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_11	phrog_541	87.4	1.2e-25	head-tail adaptor	connector
PHROG	UHGV-0033275_12	phrog_10	184.1	0	major head protein	head and packaging
UniRef90	UHGV-0033275_12	UniRef90_A0A2A7AII3	595.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0033275_12	1120998.AUFC01000030_gene2236	395.0	0	Phage capsid family	N/A
Pfam	UHGV-0033275_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0033275_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0033275_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0033275_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_13	phrog_194	59.9	3.2e-17	head scaffolding protein	head and packaging
UniRef90	UHGV-0033275_13	UniRef90_E6U604	142.0	7.79e-40	Minor structural GP20 protein	N/A
eggNOG-mapper	UHGV-0033275_13	663278.Ethha_0093	142.0	1.31e-40	N/A	N/A
Pfam	UHGV-0033275_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0033275_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_16	phrog_581	350.9	0	minor head protein	head and packaging
UniRef90	UHGV-0033275_16	UniRef90_UPI001CBDED93	1118.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0033275_16	748224.HMPREF9436_03339	716.0	0	N/A	N/A
Pfam	UHGV-0033275_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0033275_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033275_16	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_17	phrog_533	368.4	0	portal protein	head and packaging
UniRef90	UHGV-0033275_17	UniRef90_E2ZNR0	910.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0033275_17	748224.HMPREF9436_03340	910.0	0	N/A	N/A
structural_annotation	UHGV-0033275_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_18	K06909	89.4	3.5e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0033275_18	phrog_10250	101.5	6.4e-30	N/A	unknown function
UniRef90	UHGV-0033275_18	UniRef90_E2ZNR1	876.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0033275_18	748224.HMPREF9436_03341	876.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0033275_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0033275_18	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_19	K07474	152.9	2.8026e-45	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0033275_19	phrog_51	148.1	3.92364e-44	terminase small subunit	head and packaging
UniRef90	UHGV-0033275_19	UniRef90_A0A3A6JQY9	313.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0033275_19	742740.HMPREF9474_03499	173.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0033275_19	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0033275_19	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0033275_20	phrog_36	51.5	0.000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033275_20	UniRef90_A0A3E2U224	133.0	1.7e-37	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033275_20	748224.HMPREF9436_01463	267.0	0	N/A	N/A
structural_annotation	UHGV-0033275_20	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_21	K01160	47.1	0.00000000000057	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0033275_21	phrog_140	93.1	3e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033275_21	UniRef90_UPI00122CFAB3	249.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0033275_21	478749.BRYFOR_07588	144.0	7.8753e-43	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0033275_21	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0033275_21	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0033275_21	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_22	K07505	382.7	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0033275_22	phrog_2597	1107.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033275_22	UniRef90_A0A2A6Z731	1380.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0033275_22	999413.HMPREF1094_00232	861.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0033275_22	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0033275_22	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0033275_22	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0033275_22	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_23	K17677	348.4	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0033275_23	phrog_16	274.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033275_23	UniRef90_A0A3A6K1C0	999.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0033275_23	610130.Closa_1369	761.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0033275_23	mREase_IV_00005	142.0	4.90034e-42	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0033275_23	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0033275_23	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0033275_23	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0033275_23	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_24	phrog_2698	194.9	0	N/A	unknown function
UniRef90	UHGV-0033275_24	UniRef90_A0A291T9B6	329.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033275_24	394503.Ccel_3308	122.0	4.19e-33	N/A	N/A
structural_annotation	UHGV-0033275_24	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_25	phrog_124	227.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033275_25	UniRef90_UPI00122C2B12	574.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0033275_25	645991.Sgly_0321	350.0	0	AAA domain	N/A
Pfam	UHGV-0033275_25	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0033275_25	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_26	K03546	54.8	0.0000000000000011	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0033275_26	phrog_1499	461.5	0	N/A	unknown function
UniRef90	UHGV-0033275_26	UniRef90_A0A3A6KBP8	697.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0033275_26	1235798.C817_04766	473.0	0	AAA ATPase domain	N/A
Pfam	UHGV-0033275_26	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0033275_26	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0033275_26	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033275_27	UniRef90_UPI00196846D9	74.7	0.000000000286	cell envelope integrity protein TolA	N/A
eggNOG-mapper	UHGV-0033275_27	663278.Ethha_2445	83.2	0.0000000000000726	DNA binding	N/A
COG	UHGV-0033275_27	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
UniRef90	UHGV-0033275_28	UniRef90_UPI001D0E65C2	121.0	2.95e-33	N/A	N/A
structural_annotation	UHGV-0033275_28	PF12957	N/A	N/A	N/A	N/A
Pfam	UHGV-0033275_29	PF06221	N/A	N/A	Putative zinc finger motif, C2HC5-type	zf-C2HC5
UniRef90	UHGV-0033275_31	UniRef90_UPI00130EBC54	144.0	3.26503e-43	N/A	N/A
eggNOG-mapper	UHGV-0033275_31	1229751.R9QLK3_9CAUD	53.1	0.0000000347	N/A	N/A
structural_annotation	UHGV-0033275_31	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_32	phrog_130	139.6	2.20004e-41	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0033275_32	UniRef90_A6NWY1	145.0	1.92959e-42	BRO family, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0033275_32	411471.SUBVAR_04440	161.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0033275_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0033275_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0033275_32	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0033275_34	phrog_2232	189.7	0	N/A	unknown function
UniRef90	UHGV-0033275_34	UniRef90_A0A6A7K9D3	163.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0033275_34	748224.HMPREF9436_01448	540.0	0	N/A	N/A
Pfam	UHGV-0033275_34	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-0033275_34	PF14337,TIGR03899	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033275_35	86416.Clopa_2856	62.8	0.00000000311	N/A	N/A
structural_annotation	UHGV-0033275_35	PF00227,MF_02113_B,TIGR03690,COG0638	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_37	K07729	49.2	0.00000000000011	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0033275_37	UniRef90_A0A3A6CNZ7	117.0	1.94e-33	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033275_37	411465.PEPMIC_00039	58.2	0.000000000208	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0033275_37	retron_type_VI_hth_cluster2_1	43.1	0.000000000012	N/A	Retron
Pfam	UHGV-0033275_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033275_37	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0033275_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033275_38	K01356	150.4	1.68156e-44	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0033275_38	phrog_4	126.4	2.5e-37	transcriptional repressor	transcription regulation
UniRef90	UHGV-0033275_38	UniRef90_A0A2A7BH16	289.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0033275_38	657322.FPR_01410	166.0	0	N/A	N/A
PADLOC	UHGV-0033275_38	retron_type_VI_hth_cluster2_1	40.0	0.000000000071	N/A	Retron
Pfam	UHGV-0033275_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0033275_38	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0033275_38	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0033275_38	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033275_39	641112.ACOK01000103_gene519	59.7	0.0000000081	N/A	N/A
KOfam	UHGV-0033275_40	K14059	117.2	2.4e-34	int; integrase	N/A
PHROG	UHGV-0033275_40	phrog_1	102.7	4.4e-30	integrase	integration and excision
UniRef90	UHGV-0033275_40	UniRef90_A0A3F3JU91	686.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0033275_40	748224.HMPREF9436_03382	613.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0033275_40	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0033275_40	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033275_40	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0033275_40	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A