UHGV-0033682 (vOTU-140721)

Viral Genome: UHGV-0033682

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0033682
vOTU ID	vOTU-140721
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_G_2_2602__NODE_924_length_50933_cov_43.641596
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	86.67 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	17
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.981
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	36.28
Jumbo Phage?	No

Genome Content
Length (bps)	50,933
GC Content	45.50%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	56
CDS Density	93%
Average CDS Length (bps)	847.82
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0033682_3	UniRef90_A0A1M6KQH6	89.4	6.42e-21	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0033682_3	1027292.HMPREF9372_3406	67.8	0.000000000000947	Helix-turn-helix	N/A
Pfam	UHGV-0033682_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033682_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0033682_4	K07729	64.0	3e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0033682_4	phrog_3	47.8	0.0000000000006	transcriptional repressor	transcription regulation
UniRef90	UHGV-0033682_4	UniRef90_A0A1X1KP04	59.3	0.000000000424	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0033682_4	717605.Theco_0932	53.5	0.0000000101	Helix-turn-helix	N/A
PADLOC	UHGV-0033682_4	retron_type_VI_hth_cluster2_1	54.0	0.0000000000000047	N/A	Retron
Pfam	UHGV-0033682_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033682_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0033682_4	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_5	phrog_6058	73.5	1.8e-21	N/A	unknown function
UniRef90	UHGV-0033682_5	UniRef90_A0A0U9H7T0	56.6	0.00000000462	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-0033682_5	1280689.AUJC01000011_gene1497	65.5	0.000000000000279	N/A	N/A
structural_annotation	UHGV-0033682_5	PF12728,TIGR01764	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_6	phrog_14367	57.6	9.5e-17	N/A	unknown function
UniRef90	UHGV-0033682_6	UniRef90_R6WTN1	169.0	0	Peptidoglycan-binding LysM	N/A
eggNOG-mapper	UHGV-0033682_6	1312954.KI914870_gene757	50.8	0.00000213	LysM domain	N/A
Pfam	UHGV-0033682_6	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0033682_6	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0033682_6	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_9	phrog_155	163.7	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033682_9	UniRef90_A0A843HP81	193.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0033682_9	386415.NT01CX_2192	171.0	0	ERF superfamily	N/A
Pfam	UHGV-0033682_9	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0033682_9	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_10	phrog_7566	98.3	4.2e-29	N/A	unknown function
UniRef90	UHGV-0033682_10	UniRef90_A0A417QFX9	84.3	2.41e-19	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0033682_10	97139.C824_00037	62.0	0.0000000000421	N/A	N/A
PHROG	UHGV-0033682_11	phrog_72	62.1	8.6e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0033682_11	1507.HMPREF0262_00432	116.0	1.6e-30	N/A	N/A
structural_annotation	UHGV-0033682_11	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_12	phrog_270	101.0	1.6e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033682_12	UniRef90_UPI0006877B23	116.0	1.02e-27	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0033682_12	658086.HMPREF0994_02124	107.0	6.38e-25	N/A	N/A
Pfam	UHGV-0033682_12	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0033682_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0033682_12	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_13	phrog_9804	40.2	0.000000000041	N/A	unknown function
UniRef90	UHGV-0033682_13	UniRef90_A0A316S7J6	102.0	8.27e-24	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0033682_13	1280706.AUJE01000046_gene1152	69.7	0.00000000000345	N/A	N/A
structural_annotation	UHGV-0033682_13	PF11417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033682_15	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_20	phrog_10714	59.8	4.4e-17	N/A	unknown function
structural_annotation	UHGV-0033682_20	PF21173	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_21	phrog_954	184.5	0	DNA methyltransferase	other
UniRef90	UHGV-0033682_21	UniRef90_A0A226QS88	174.0	0	SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0033682_21	457405.FSDG_01549	161.0	0	methyltransferase	N/A
PADLOC	UHGV-0033682_21	MTase_II_00074	156.0	0	Type II methyltransferase	RM
COG	UHGV-0033682_21	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0033682_21	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
KOfam	UHGV-0033682_25	K03111	118.2	1.2e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0033682_25	phrog_44	126.7	1.8e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033682_25	UniRef90_R6WK64	162.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0033682_25	1262915.BN574_00939	154.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0033682_25	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0033682_25	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0033682_25	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0033682_25	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0033682_25	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_26	phrog_190	140.6	8.80015e-42	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033682_26	UniRef90_A0A7C6K533	127.0	1.24e-35	N/A	N/A
eggNOG-mapper	UHGV-0033682_26	1347392.CCEZ01000043_gene417	119.0	2.27e-33	N/A	N/A
Pfam	UHGV-0033682_26	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0033682_26	PF06356	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033682_27	401526.TcarDRAFT_1279	77.0	8.64e-16	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0033682_27	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_28	phrog_2329	72.1	4.7e-21	N/A	unknown function
UniRef90	UHGV-0033682_28	UniRef90_A0A2R2ZGX3	65.9	0.000000000000586	Putative PemI	N/A
eggNOG-mapper	UHGV-0033682_28	1120746.CCNL01000005_gene152	66.2	0.000000000000988	N/A	N/A
Pfam	UHGV-0033682_28	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
structural_annotation	UHGV-0033682_28	PF04014,NF007312,COG2336	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033682_29	742738.HMPREF9460_00886	92.4	1.71e-19	N/A	N/A
eggNOG-mapper	UHGV-0033682_30	1280689.AUJC01000003_gene960	52.0	0.000000281	N/A	N/A
KOfam	UHGV-0033682_31	K07474	85.7	1.2e-24	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0033682_31	phrog_51	88.8	6.8e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0033682_31	UniRef90_UPI000833FD0A	99.8	5.47e-24	terminase small subunit	N/A
eggNOG-mapper	UHGV-0033682_31	1391647.AVSV01000003_gene1801	91.3	2.64e-21	Terminase small subunit	N/A
Pfam	UHGV-0033682_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0033682_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0033682_31	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0033682_32	K06909	194.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0033682_32	phrog_3717	226.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033682_32	UniRef90_A0A4S3L2W2	306.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0033682_32	1430331.EP10_10340	306.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0033682_32	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0033682_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0033682_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-0033682_33	phrog_59	147.9	2.38221e-44	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033682_33	UniRef90_UPI0006B40E82	253.0	0	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-0033682_33	1458851.X2KXT0_9CAUD	131.0	2.71e-36	HNH endonuclease	N/A
PADLOC	UHGV-0033682_33	HEase_00016	85.9	2.8e-27	homing endonuclease	RM
Pfam	UHGV-0033682_33	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0033682_33	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0033682_33	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0033682_34	K06909	40.8	0.000000000026	xtmB; phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0033682_34	1009370.ALO_12436	227.0	0	Phage terminase, large subunit	N/A
COG	UHGV-0033682_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0033682_34	PF20441,MF_04144,TIGR01547	N/A	N/A	N/A	N/A
Pfam	UHGV-0033682_35	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0033682_35	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_36	phrog_156	436.5	0	portal protein	head and packaging
UniRef90	UHGV-0033682_36	UniRef90_F7NK66	509.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-0033682_36	401526.TcarDRAFT_1284	536.0	0	Tfp pilus assembly protein FimV	N/A
COG	UHGV-0033682_36	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0033682_36	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_39	phrog_334	299.9	0	major head protein	head and packaging
UniRef90	UHGV-0033682_39	UniRef90_A0A316SB53	440.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0033682_39	401526.TcarDRAFT_1286	313.0	0	N/A	N/A
Pfam	UHGV-0033682_39	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0033682_39	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0033682_39	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_40	phrog_399	51.2	0.000000000000011	structural protein	head and packaging
Pfam	UHGV-0033682_40	PF20387	N/A	N/A	N/A	DUF6682
structural_annotation	UHGV-0033682_40	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_41	phrog_892	51.0	0.00000000000002	tail fiber protein	tail
eggNOG-mapper	UHGV-0033682_41	500635.MITSMUL_03162	150.0	9.33e-34	domain protein	N/A
Pfam	UHGV-0033682_41	PF09458	N/A	N/A	H-type lectin domain	H_lectin
COG	UHGV-0033682_41	COG1344	N/A	N/A	Flagellin and related hook-associated protein FlgL	N/A
KOfam	UHGV-0033682_42	K16628	151.2	1.4013e-45	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0033682_42	phrog_819	131.5	0	tail protein	tail
eggNOG-mapper	UHGV-0033682_42	1435051.BMOU_0760	67.4	0.00000000349	outer membrane autotransporter barrel domain protein	N/A
Pfam	UHGV-0033682_42	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0033682_42	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-0033682_42	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033682_44	478749.BRYFOR_07557	56.6	0.00000545	tail collar domain protein	N/A
COG	UHGV-0033682_44	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0033682_45	PF16116	N/A	N/A	N/A	N/A
PHROG	UHGV-0033682_46	phrog_2837	60.5	2.5e-17	tail protein	tail
UniRef90	UHGV-0033682_46	UniRef90_A0A1Q6R2G9	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033682_46	1286631.X805_38770	55.8	0.000000336	N/A	N/A
Pfam	UHGV-0033682_46	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0033682_46	PF14301	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033682_47	883156.HMPREF9282_00569	223.0	0	N/A	N/A
structural_annotation	UHGV-0033682_47	PF11134,MF_03008,NF010237,TIGR04362,COG4257	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033682_48	PF00765,MF_02210,NF007644,COG2153	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033682_49	UniRef90_UPI00047F33D6	114.0	1.39e-25	Hint domain-containing protein	N/A
eggNOG-mapper	UHGV-0033682_49	1232428.CAVO010000067_gene416	174.0	0	N/A	N/A
PHROG	UHGV-0033682_51	phrog_10089	1507.1	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0033682_51	UniRef90_A0A010ZMB0	567.0	0	SNF2 family protein,Eco57I restriction endonuclease	N/A
eggNOG-mapper	UHGV-0033682_51	1029823.AFIE01000007_gene1881	1309.0	0	methylase	N/A
Pfam	UHGV-0033682_51	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
Pfam	UHGV-0033682_51	PF18809	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	PBECR1
Pfam	UHGV-0033682_51	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0033682_51	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-0033682_51	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0033682_51	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0033682_51	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
eggNOG-mapper	UHGV-0033682_54	1392502.JNIO01000008_gene1280	226.0	0	N/A	N/A
structural_annotation	UHGV-0033682_54	PF21277	N/A	N/A	N/A	N/A