UHGV-0034371 (vOTU-087148)

Viral Genome: UHGV-0034371

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0034371
vOTU ID	vOTU-087148
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Hadza_MoBio_hadza-I-L_M_23_2501__NODE_3397_length_15745_cov_22.410837
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	69.37 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9783
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.94
Jumbo Phage?	No

Genome Content
Length (bps)	15,745
GC Content	38.71%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	19
CDS Density	93%
Average CDS Length (bps)	768.32
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0034371_1	K19721	146.0	8.54792e-44	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0034371_1	phrog_8745	125.9	0	tail fiber protein	tail
eggNOG-mapper	UHGV-0034371_1	1203606.HMPREF1526_02029	70.9	0.000000000636	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0034371_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0034371_1	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A
PHROG	UHGV-0034371_3	phrog_3225	124.4	9.5e-37	adaptor Ad4	connector
eggNOG-mapper	UHGV-0034371_3	10756.TUB11_BPPH2	69.7	0.0000000000322	N/A	N/A
PHROG	UHGV-0034371_4	phrog_2038	203.6	0	upper collar connector	connector
eggNOG-mapper	UHGV-0034371_4	338473.A6XAD7_9CAUD	131.0	5.45e-33	Phage Connector (GP10)	N/A
Pfam	UHGV-0034371_4	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0034371_4	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0034371_5	phrog_2248	107.4	0	tail protein	tail
UniRef90	UHGV-0034371_5	UniRef90_A0A843GNE5	246.0	0	Caud_tail_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0034371_5	10756.DIT9_BPPH2	83.6	0.0000000000000394	N/A	N/A
Pfam	UHGV-0034371_5	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-0034371_5	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
structural_annotation	UHGV-0034371_5	PF20934,PF16838	N/A	N/A	N/A	N/A
PHROG	UHGV-0034371_6	phrog_2006	282.6	0	major head protein	head and packaging
UniRef90	UHGV-0034371_6	UniRef90_A0A843HQR2	353.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0034371_6	10756.CAPSD_BPPH2	182.0	0	viral capsid	N/A
structural_annotation	UHGV-0034371_6	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
KOfam	UHGV-0034371_8	K07273	159.5	0	acm; lysozyme	N/A
PHROG	UHGV-0034371_8	phrog_291	120.5	1.8e-35	endolysin	lysis
UniRef90	UHGV-0034371_8	UniRef90_A0A174YPM8	164.0	1.4013e-45	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0034371_8	883114.HMPREF9709_01178	153.0	2.14959e-42	hydrolase family 25	N/A
Pfam	UHGV-0034371_8	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0034371_8	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0034371_8	PF01183,MF_02227,NF002576,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0034371_9	phrog_199	51.5	0.000000000000011	holin	lysis
UniRef90	UHGV-0034371_9	UniRef90_A0A087CMI9	73.6	0.0000000000000234	Holin family protein	N/A
eggNOG-mapper	UHGV-0034371_9	1437610.BREU_1264	73.6	0.00000000000000392	Bacteriophage holin family	N/A
Pfam	UHGV-0034371_9	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0034371_9	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0034371_9	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0034371_10	K21237	607.9	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0034371_10	phrog_1907	435.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034371_10	UniRef90_A0A1W7M4V8	474.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0034371_10	12345.Q96206_BPGA1	420.0	0	nucleotide binding	N/A
Pfam	UHGV-0034371_10	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-0034371_10	PF03175,MF_04055,NF004415,COG0417	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034371_11	PF05435	N/A	N/A	N/A	N/A
PHROG	UHGV-0034371_12	phrog_6243	60.0	3.5e-17	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0034371_12	PF17427	N/A	N/A	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
structural_annotation	UHGV-0034371_12	PF17427	N/A	N/A	N/A	N/A
PHROG	UHGV-0034371_14	phrog_2150	184.4	0	terminase	head and packaging
UniRef90	UHGV-0034371_14	UniRef90_A0A355RJE0	156.0	4.57005e-41	DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-0034371_14	10756.PKG16_BPPH2	140.0	3.14e-36	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-0034371_14	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0034371_14	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034371_18	PF01383	N/A	N/A	N/A	N/A