UHGV-0035038 (vOTU-162557)

Viral Genome: UHGV-0035038

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0035038
vOTU ID	vOTU-162557
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_D_17_CHE1007SZ__NODE_2704_length_31419_cov_5.928945
Associated Biosample	SAMEA4969130
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	80.61 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	17
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9825
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	39.63
Jumbo Phage?	No

Genome Content
Length (bps)	31,419
GC Content	51.53%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	55
CDS Density	97%
Average CDS Length (bps)	553.91
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.61)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0035038_1	phrog_30113	131.4	6.5e-39	N/A	unknown function
UniRef90	UHGV-0035038_1	UniRef90_UPI001A9BF58C	284.0	0	N/A	N/A
eggNOG-mapper	UHGV-0035038_1	1122216.AUHW01000002_gene1800	220.0	0	N/A	N/A
Pfam	UHGV-0035038_1	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0035038_1	PF01351,MF_00052_A,TIGR00729,COG1039	N/A	N/A	N/A	N/A
KOfam	UHGV-0035038_2	K01448	61.5	1.2e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0035038_2	phrog_435	72.0	1e-20	endolysin	lysis
UniRef90	UHGV-0035038_2	UniRef90_A0A2V2GRI9	389.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0035038_2	1519439.JPJG01000014_gene134	54.3	0.00000502	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0035038_2	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0035038_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0035038_2	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035038_3	1347392.CCEZ01000043_gene405	58.5	0.000000000901	N/A	N/A
PHROG	UHGV-0035038_4	phrog_1863	60.1	2.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0035038_4	718252.FP2_04900	74.7	1.37e-16	N/A	N/A
PHROG	UHGV-0035038_5	phrog_2310	51.4	0.00000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0035038_5	1151292.QEW_0364	45.8	0.00000478	N/A	N/A
PHROG	UHGV-0035038_7	phrog_29409	154.0	0	N/A	unknown function
UniRef90	UHGV-0035038_7	UniRef90_A0A2V2GQ35	239.0	0	Isoaspartyl peptidase	N/A
PHROG	UHGV-0035038_8	phrog_37900	226.1	0	N/A	unknown function
UniRef90	UHGV-0035038_8	UniRef90_A0A2V2GLK0	646.0	0	N/A	N/A
eggNOG-mapper	UHGV-0035038_8	552398.HMPREF0866_03098	184.0	0	N/A	N/A
Pfam	UHGV-0035038_8	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0035038_8	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0035038_8	PF19789,PF03785	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_10	phrog_13589	165.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0035038_10	428125.CLOLEP_01434	199.0	0	N/A	N/A
PHROG	UHGV-0035038_11	phrog_31538	44.9	0.0000000000022	N/A	unknown function
PHROG	UHGV-0035038_12	phrog_15594	67.1	2.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0035038_12	1118055.CAGU01000013_gene763	55.5	0.000000016	N/A	N/A
structural_annotation	UHGV-0035038_12	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_14	phrog_18725	72.4	2.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0035038_14	1226322.HMPREF1545_00062	95.9	4.8e-22	N/A	N/A
structural_annotation	UHGV-0035038_14	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0035038_15	K01361	60.8	8.7e-18	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0035038_15	phrog_11157	240.4	0	N/A	unknown function
UniRef90	UHGV-0035038_15	UniRef90_UPI001C10C6DC	383.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0035038_15	476272.RUMHYD_02867	286.0	0	N/A	N/A
Pfam	UHGV-0035038_15	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0035038_15	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
NCBIFam	UHGV-0035038_15	NF033510.3	N/A	N/A	Ca2+-stabilized repeat-containing adhesin	N/A
COG	UHGV-0035038_15	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0035038_15	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_17	phrog_13879	252.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0035038_17	1226322.HMPREF1545_00061	488.0	0	N/A	N/A
structural_annotation	UHGV-0035038_17	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_18	phrog_1194	64.7	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0035038_18	1226322.HMPREF1545_00060	215.0	0	N/A	N/A
structural_annotation	UHGV-0035038_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_19	phrog_1535	97.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0035038_19	UniRef90_A0A810PX76	218.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0035038_19	1226322.HMPREF1545_00059	163.0	3.18e-39	tape measure	N/A
COG	UHGV-0035038_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0035038_19	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_20	phrog_706	108.2	7.1e-32	N/A	unknown function
UniRef90	UHGV-0035038_20	UniRef90_UPI000682A80B	229.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0035038_20	693746.OBV_18170	221.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0035038_20	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0035038_20	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_21	phrog_11299	94.4	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0035038_21	693746.OBV_18160	104.0	9.86e-27	N/A	N/A
structural_annotation	UHGV-0035038_21	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_22	phrog_3099	96.4	3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0035038_22	1226322.HMPREF1545_00056	254.0	0	N/A	N/A
structural_annotation	UHGV-0035038_22	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_23	phrog_3266	59.3	5e-17	tail completion	connector
eggNOG-mapper	UHGV-0035038_23	1232443.BAIA02000078_gene24	187.0	0	N/A	N/A
structural_annotation	UHGV-0035038_23	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_24	phrog_556	74.5	1.2e-21	minor head protein	head and packaging
UniRef90	UHGV-0035038_24	UniRef90_A0A2U1BEM0	198.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0035038_24	1226322.HMPREF1545_00054	160.0	0	Minor capsid protein	N/A
Pfam	UHGV-0035038_24	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0035038_24	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_25	phrog_3366	96.7	2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0035038_25	1226322.HMPREF1545_00053	139.0	1.81e-40	N/A	N/A
Pfam	UHGV-0035038_25	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0035038_25	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_26	phrog_541	108.2	4.1e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0035038_26	642492.Clole_0822	63.5	0.0000000000644	N/A	N/A
PHROG	UHGV-0035038_27	phrog_10	165.3	0	major head protein	head and packaging
UniRef90	UHGV-0035038_27	UniRef90_A0A2U1BEF2	498.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0035038_27	1226322.HMPREF1545_00050	474.0	0	Phage capsid family	N/A
Pfam	UHGV-0035038_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0035038_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0035038_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0035038_27	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_28	phrog_2303	57.2	2.5e-16	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0035038_28	1226322.HMPREF1545_00049	182.0	0	N/A	N/A
structural_annotation	UHGV-0035038_29	PF11607,MF_00436,NF011232,COG1923	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_30	phrog_581	292.3	0	minor head protein	head and packaging
UniRef90	UHGV-0035038_30	UniRef90_A0A1C5N7V1	716.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0035038_30	1226322.HMPREF1545_00046	531.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0035038_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0035038_30	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0035038_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035038_30	PF06152,PF15542,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_31	phrog_533	379.2	0	portal protein	head and packaging
UniRef90	UHGV-0035038_31	UniRef90_UPI0006C81717	662.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0035038_31	1226322.HMPREF1545_00044	605.0	0	N/A	N/A
Pfam	UHGV-0035038_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0035038_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0035038_32	K06909	386.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0035038_32	phrog_3717	158.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0035038_32	UniRef90_A0A2U1BEH4	733.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0035038_32	33035.JPJF01000106_gene3136	478.0	0	Terminase small subunit	N/A
Pfam	UHGV-0035038_32	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0035038_32	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0035038_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0035038_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0035038_32	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0035038_33	K07474	113.3	3.8e-33	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0035038_33	phrog_51	111.4	5.7e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0035038_33	UniRef90_A0A396NMY4	123.0	6.35e-34	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0035038_33	1235800.C819_00494	110.0	2.22e-29	Terminase small subunit	N/A
Pfam	UHGV-0035038_33	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0035038_33	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0035038_33	PF03592,COG3728	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035038_34	UniRef90_A0A3B9CD52	59.3	0.000000000814	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0035038_34	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_35	phrog_7339	101.0	9.2e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035038_35	UniRef90_A0A2V2GLL9	525.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0035038_35	1150474.JQJI01000006_gene784	92.4	6.5e-19	metallophosphoesterase	N/A
Pfam	UHGV-0035038_35	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0035038_35	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
PHROG	UHGV-0035038_36	phrog_36	43.2	0.0000000000068	transcriptional regulator	transcription regulation
UniRef90	UHGV-0035038_36	UniRef90_UPI001D0837DD	114.0	1.01e-29	N/A	N/A
eggNOG-mapper	UHGV-0035038_36	428125.CLOLEP_01806	86.7	1.51e-19	N/A	N/A
structural_annotation	UHGV-0035038_36	PF07374,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0035038_39	UniRef90_A0A8D9PDQ6	142.0	3.06884e-43	Restriction alleviation protein	N/A
Pfam	UHGV-0035038_39	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0035038_39	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0035038_39	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_44	phrog_1271	41.4	0.000000000024	HNH endonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0035038_44	TIGR04381	N/A	N/A	N/A	N/A
KOfam	UHGV-0035038_46	K01160	65.5	1.3e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0035038_46	phrog_34	71.6	1.2e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035038_46	UniRef90_A0A498CNH4	146.0	1.91978e-43	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0035038_46	477974.Daud_0813	50.8	0.00000491	N/A	N/A
Pfam	UHGV-0035038_46	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0035038_46	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_47	phrog_9804	167.6	0	N/A	unknown function
UniRef90	UHGV-0035038_47	UniRef90_UPI001E312ACC	361.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0035038_47	1121344.JHZO01000003_gene981	179.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0035038_47	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0035038_47	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_48	phrog_16304	90.7	1.7e-26	N/A	unknown function
UniRef90	UHGV-0035038_48	UniRef90_UPI001E560709	425.0	0	N/A	N/A
eggNOG-mapper	UHGV-0035038_48	290402.Cbei_3733	61.6	0.0000000132	DnaD domain protein	N/A
Pfam	UHGV-0035038_48	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0035038_48	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0035038_48	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0035038_49	K03111	127.4	1.6e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0035038_49	phrog_44	129.7	2.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035038_49	UniRef90_UPI001E2A5A6F	234.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0035038_49	445972.ANACOL_01827	122.0	5e-34	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0035038_49	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0035038_49	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0035038_49	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0035038_49	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0035038_49	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_50	phrog_757	217.0	0	DNA methyltransferase	other
UniRef90	UHGV-0035038_50	UniRef90_UPI0006A41431	251.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0035038_50	1235790.C805_00032	258.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0035038_50	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0035038_50	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_51	phrog_7566	51.6	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0035038_51	693746.OBV_24070	68.6	0.000000000000228	N/A	N/A
PHROG	UHGV-0035038_52	phrog_72	67.0	2.6e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0035038_52	UniRef90_UPI001F3F3E5C	145.0	6.83007e-41	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0035038_52	445972.ANACOL_01825	129.0	1.4e-35	N/A	N/A
structural_annotation	UHGV-0035038_52	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_53	phrog_14970	192.2	0	N/A	unknown function
UniRef90	UHGV-0035038_53	UniRef90_UPI00123F00F5	178.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0035038_53	428127.EUBDOL_01248	155.0	5.60519e-45	double-strand break repair protein	N/A
Pfam	UHGV-0035038_53	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0035038_53	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0035038_53	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0035038_55	phrog_27197	114.6	1.10001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0035038_55	394503.Ccel_3068	52.0	0.00000231	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0035038_55	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0035038_55	NF007410	N/A	N/A	N/A	N/A