UHGV-0035563 (vOTU-130360)

Viral Genome: UHGV-0035563

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0035563
vOTU ID	vOTU-130360
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Pilot_MoBio_Fiber_I_11_1003__NODE_5104_length_26225_cov_959.075111
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	58.06 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9662
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	-2.37
Jumbo Phage?	No

Genome Content
Length (bps)	26,225
GC Content	42.07%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	35
CDS Density	87%
Average CDS Length (bps)	648.60
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0035563_1	phrog_56	55.5	0.0000000000000012	DNA methyltransferase	other
UniRef90	UHGV-0035563_1	UniRef90_A0A3G1FFB0	63.2	0.000000000396	Site-specific DNA methylase	N/A
eggNOG-mapper	UHGV-0035563_1	1165134.H9ED37_9CAUD	58.5	0.0000000352	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0035563_1	MTase_II_00075	75.8	1.4e-21	Type II methyltransferase	RM
PHROG	UHGV-0035563_6	phrog_3136	135.0	2.4e-40	N/A	unknown function
UniRef90	UHGV-0035563_6	UniRef90_A0A3D0HBD2	119.0	1.49e-30	ASCH domain-containing protein	N/A
COG	UHGV-0035563_6	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0035563_6	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0035563_7	phrog_18805	52.1	0.0000000000000075	N/A	unknown function
eggNOG-mapper	UHGV-0035563_7	1122983.BAJY01000022_gene1228	52.4	0.00000478	domain, Protein	N/A
Pfam	UHGV-0035563_7	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0035563_7	COG5492	N/A	N/A	N/A	N/A
Pfam	UHGV-0035563_11	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
Pfam	UHGV-0035563_11	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
PHROG	UHGV-0035563_14	phrog_38	80.8	1.5e-23	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-0035563_14	428127.EUBDOL_01551	171.0	2.8026e-45	chromosome segregation	N/A
COG	UHGV-0035563_14	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035563_14	PF17289,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0035563_16	phrog_64	155.2	0	portal protein	head and packaging
UniRef90	UHGV-0035563_16	UniRef90_UPI001BAAB616	191.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0035563_16	1123263.AUKY01000015_gene1609	127.0	4.42e-29	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0035563_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0035563_16	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0035563_18	phrog_247	286.4	0	major head protein	head and packaging
UniRef90	UHGV-0035563_18	UniRef90_A0A7C6NZC6	413.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-0035563_18	1292035.H476_1014	391.0	0	N/A	N/A
COG	UHGV-0035563_18	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0035563_18	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035563_20	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035563_22	PF06141	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0035563_23	469596.HMPREF9488_01310	64.3	0.000000000089	N/A	N/A
structural_annotation	UHGV-0035563_23	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0035563_26	phrog_28918	47.1	0.000000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0035563_26	428127.EUBDOL_01563	179.0	3.36312e-44	homoserine transmembrane transporter activity	N/A
COG	UHGV-0035563_26	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
COG	UHGV-0035563_27	COG1934	N/A	N/A	Lipopolysaccharide export system protein LptA	N/A
structural_annotation	UHGV-0035563_27	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0035563_28	PF14594,TIGR01665,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0035563_30	phrog_24267	101.4	1.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0035563_30	658088.HMPREF0987_01104	125.0	4.93e-28	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-0035563_30	COG4675	N/A	N/A	Phage tail collar domain	N/A