UHGV-0036511 (vOTU-083066)

Viral Genome: UHGV-0036511

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0036511
vOTU ID	vOTU-083066
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Pilot_MoBio_Fiber_N_24_7019__NODE_1421_length_39447_cov_26.013310
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	98.8 (High-quality)
Trimmed?	No
CheckV Viral Markers	8
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9729
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	24.48
Jumbo Phage?	No

Genome Content
Length (bps)	39,447
GC Content	40.45%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	51
CDS Density	96%
Average CDS Length (bps)	744.94
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.8)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0036511_2	K14059	184.2	0	int; integrase	N/A
PHROG	UHGV-0036511_2	phrog_1	175.2	0	integrase	integration and excision
UniRef90	UHGV-0036511_2	UniRef90_A0A318EPS8	274.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0036511_2	1235799.C818_03513	187.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0036511_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0036511_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036511_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0036511_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036511_3	1163671.JAGI01000002_gene1685	62.8	0.00000000594	Flagellar rod assembly protein muramidase FlgJ	N/A
NCBIFam	UHGV-0036511_3	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-0036511_3	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
UniRef90	UHGV-0036511_4	UniRef90_A0A3R6QMJ7	94.7	1.12e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0036511_4	332101.JIBU02000008_gene624	45.4	0.0000066	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0036511_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036511_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0036511_4	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_6	K18830	71.6	1.6e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0036511_6	phrog_2967	59.2	7.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0036511_6	UniRef90_A0A3R6UL37	227.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0036511_6	445972.ANACOL_03315	124.0	2.45e-35	N/A	N/A
Pfam	UHGV-0036511_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036511_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0036511_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036511_8	PF09035	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_9	phrog_6058	43.1	0.0000000000045	N/A	unknown function
UniRef90	UHGV-0036511_9	UniRef90_A0A416Z3U8	131.0	9.46e-39	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0036511_9	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0036511_13	phrog_3584	157.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0036511_13	1235800.C819_02258	270.0	0	N/A	N/A
structural_annotation	UHGV-0036511_13	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_14	K03469	54.6	0.0000000000000024	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
UniRef90	UHGV-0036511_14	UniRef90_A0A416Z2U3	301.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036511_14	1163389.OOM_1312	68.6	0.00000000000156	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0036511_14	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0036511_14	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0036511_14	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_15	phrog_7370	47.5	0.000000000000086	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036511_15	UniRef90_UPI00164A90AD	142.0	1.43003e-41	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0036511_15	1235800.C819_02254	105.0	1.4e-27	HNH nucleases	N/A
PHROG	UHGV-0036511_16	phrog_20593	42.4	0.0000000000097	N/A	unknown function
UniRef90	UHGV-0036511_16	UniRef90_A0A1C5TF07	87.4	7.43e-20	N/A	N/A
eggNOG-mapper	UHGV-0036511_16	658655.HMPREF0988_02575	86.3	2.86e-20	N/A	N/A
PHROG	UHGV-0036511_18	phrog_874	152.1	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0036511_18	UniRef90_UPI0018F57B3A	241.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0036511_18	411468.CLOSCI_00298	166.0	0	N/A	N/A
structural_annotation	UHGV-0036511_18	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036511_20	1117958.PE143B_0129235	49.7	0.000000986	N/A	N/A
eggNOG-mapper	UHGV-0036511_22	1235792.C808_00065	186.0	0	N/A	N/A
PHROG	UHGV-0036511_23	phrog_8470	205.7	0	N/A	unknown function
UniRef90	UHGV-0036511_23	UniRef90_UPI001E5C1444	226.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0036511_23	1280698.AUJS01000007_gene1018	172.0	1.54984e-42	N/A	N/A
Pfam	UHGV-0036511_23	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0036511_23	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_24	phrog_15077	102.3	2.9e-30	N/A	unknown function
UniRef90	UHGV-0036511_24	UniRef90_A0A3A6HZA9	167.0	8.26766e-44	N/A	N/A
eggNOG-mapper	UHGV-0036511_24	1280698.AUJS01000007_gene1019	189.0	0	N/A	N/A
structural_annotation	UHGV-0036511_24	PF11300,NF038070	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036511_26	PF09889,COG4068	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036511_27	UniRef90_UPI001D072F7E	84.0	6.53e-17	N/A	N/A
eggNOG-mapper	UHGV-0036511_27	397290.C810_01492	62.4	0.000000000823	N/A	N/A
KOfam	UHGV-0036511_28	K03698	44.5	0.0000000000019	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0036511_28	phrog_28876	91.0	8.7e-27	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0036511_28	UniRef90_A0A843HIF4	182.0	0	HDIG domain-containing protein	N/A
eggNOG-mapper	UHGV-0036511_28	1235800.C819_00499	214.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0036511_28	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0036511_28	PF21447,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_32	K07474	73.8	4.2e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0036511_32	phrog_2606	143.7	1.4013e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0036511_32	UniRef90_A0A3A9GB54	156.0	4.73639e-43	Phage portal protein	N/A
eggNOG-mapper	UHGV-0036511_32	411461.DORFOR_01162	125.0	6.57e-30	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0036511_32	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0036511_32	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0036511_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0036511_32	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_33	K06909	105.7	4.7e-31	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0036511_33	phrog_979	217.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0036511_33	UniRef90_A0A2V2D4K5	984.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0036511_33	411483.FAEPRAA2165_01044	630.0	0	Terminase-like family	N/A
Pfam	UHGV-0036511_33	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0036511_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0036511_33	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_34	phrog_156	342.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0036511_34	748224.HMPREF9436_02547	509.0	0	N/A	N/A
structural_annotation	UHGV-0036511_34	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_35	K07584	72.6	6.4e-21	N/A	N/A
PHROG	UHGV-0036511_35	phrog_4478	67.6	1.3e-19	peptidase	other
UniRef90	UHGV-0036511_35	UniRef90_A0A416Z2U9	228.0	0	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0036511_35	1121914.AUDW01000025_gene171	51.6	0.000000755	Cysteine protease Prp	N/A
Pfam	UHGV-0036511_35	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0036511_35	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_36	phrog_13908	231.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0036511_36	1321782.HMPREF1986_00346	83.6	0.0000000000000013	N/A	N/A
PHROG	UHGV-0036511_37	phrog_1357	267.8	0	major head protein	head and packaging
UniRef90	UHGV-0036511_37	UniRef90_A0A3R6PQZ4	633.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0036511_37	411483.FAEPRAA2165_01040	388.0	0	N/A	N/A
Pfam	UHGV-0036511_37	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0036511_37	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0036511_37	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_38	phrog_15239	51.4	0.000000000000014	N/A	unknown function
PHROG	UHGV-0036511_39	phrog_12105	131.3	3.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0036511_39	1226322.HMPREF1545_03850	70.5	0.0000000000000662	N/A	N/A
PHROG	UHGV-0036511_40	phrog_511	238.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0036511_40	1321782.HMPREF1986_00351	327.0	0	N/A	N/A
structural_annotation	UHGV-0036511_40	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_42	phrog_21397	44.3	0.0000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0036511_42	1410650.JHWL01000003_gene2815	123.0	1.54e-28	N/A	N/A
PHROG	UHGV-0036511_43	phrog_22978	550.9	0	N/A	unknown function
UniRef90	UHGV-0036511_43	UniRef90_R5G452	579.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036511_43	1410650.JHWL01000003_gene2814	645.0	0	N/A	N/A
Pfam	UHGV-0036511_43	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
PHROG	UHGV-0036511_44	phrog_3639	49.5	0.000000000000045	minor tail protein	tail
UniRef90	UHGV-0036511_44	UniRef90_A0A3R6TVQ8	429.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036511_44	1160721.RBI_I01572	68.9	0.0000000000815	N/A	N/A
Pfam	UHGV-0036511_44	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0036511_44	PF10651,NF032891,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_46	K04763	89.3	5e-26	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0036511_46	phrog_216	64.1	2.1e-18	integrase	integration and excision
UniRef90	UHGV-0036511_46	UniRef90_A0A7U9SV36	101.0	2.29e-24	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0036511_46	1235790.C805_00610	146.0	3.47998e-41	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0036511_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036511_46	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0036511_47	PF10618,MF_01370	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036511_48	UniRef90_A0A011UAK9	52.4	0.0000000601	Antitoxin	N/A
PHROG	UHGV-0036511_49	phrog_199	79.1	4.9e-23	holin	lysis
UniRef90	UHGV-0036511_49	UniRef90_A0A3R6Q4W7	277.0	0	Holin	N/A
eggNOG-mapper	UHGV-0036511_49	411462.DORLON_00766	196.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0036511_49	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0036511_49	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0036511_49	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0036511_49	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0036511_50	phrog_872	81.0	1.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0036511_50	397290.C810_05225	110.0	1.65e-29	N/A	N/A
dbAPIS	UHGV-0036511_50	APIS052	N/A	N/A	N/A	N/A
KOfam	UHGV-0036511_51	K01448	102.5	4.8e-30	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0036511_51	phrog_435	152.3	4.2039e-45	endolysin	lysis
UniRef90	UHGV-0036511_51	UniRef90_A0A416Z2X7	482.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0036511_51	1469948.JPNB01000001_gene537	187.0	0	hmm pf01520	N/A
Pfam	UHGV-0036511_51	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0036511_51	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0036511_51	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A