UHGV-0036706 (vOTU-044557)

Viral Genome: UHGV-0036706

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0036706
vOTU ID	vOTU-044557
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_D_17_CHE1007SZ__NODE_1771_length_42890_cov_14.482961
Associated Biosample	SAMEA4969130
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9776
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	23.75
Jumbo Phage?	No

Genome Content
Length (bps)	42,817
GC Content	38.50%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	75
CDS Density	93%
Average CDS Length (bps)	529.08
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0036706_6	phrog_3878	51.9	0.000000000000015	N/A	unknown function
PHROG	UHGV-0036706_7	phrog_918	106.6	1e-31	N/A	unknown function
UniRef90	UHGV-0036706_7	UniRef90_UPI001D0B68F4	140.0	2.32994e-41	N/A	N/A
eggNOG-mapper	UHGV-0036706_7	411473.RUMCAL_00361	114.0	6.16e-32	N/A	N/A
Pfam	UHGV-0036706_7	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0036706_7	PF19791	N/A	N/A	N/A	N/A
COG	UHGV-0036706_27	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
PHROG	UHGV-0036706_28	phrog_7245	117.4	6.1e-35	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0036706_28	UniRef90_UPI001D06A358	142.0	5.82e-35	zincin-like metallopeptidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0036706_28	97139.C824_00155	151.0	3.06e-39	N/A	N/A
Pfam	UHGV-0036706_28	PF08401	N/A	N/A	N-terminal domain of anti-restriction factor ArdC	ArdcN
Pfam	UHGV-0036706_28	PF18818	N/A	N/A	Zincin-like metallopeptidase	MPTase-PolyVal
COG	UHGV-0036706_28	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
structural_annotation	UHGV-0036706_28	PF18818,PF08401,COG4227	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036706_29	97139.C824_00043	60.8	0.0000000000887	N/A	N/A
PHROG	UHGV-0036706_32	phrog_606	48.8	0.000000000000013	terminase small subunit	head and packaging
Pfam	UHGV-0036706_32	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0036706_33	K21523	44.7	5.7e-20	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0036706_33	phrog_2	90.2	3.7e-26	terminase large subunit	head and packaging
UniRef90	UHGV-0036706_33	UniRef90_UPI00189AAAC0	446.0	0	DNA packaging protein	N/A
eggNOG-mapper	UHGV-0036706_33	693746.OBV_23980	430.0	0	phage Terminase large subunit	N/A
COG	UHGV-0036706_33	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0036706_33	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_35	phrog_156	158.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0036706_35	1408437.JNJN01000001_gene1708	336.0	0	N/A	N/A
structural_annotation	UHGV-0036706_35	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036706_36	755731.Clo1100_2435	63.5	0.00000000855	N/A	N/A
PHROG	UHGV-0036706_37	phrog_422	109.8	2.5e-32	major head protein	head and packaging
UniRef90	UHGV-0036706_37	UniRef90_UPI001C115D36	196.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0036706_37	1408437.JNJN01000001_gene1710	183.0	0	N/A	N/A
structural_annotation	UHGV-0036706_37	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036706_38	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036706_39	UniRef90_A0A847CX66	491.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036706_39	871968.DESME_08885	130.0	5.85e-29	N/A	N/A
structural_annotation	UHGV-0036706_39	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036706_41	PF00386,NF033147	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0036706_43	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0036706_43	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_45	phrog_22984	53.6	0.0000000000000042	N/A	unknown function
PHROG	UHGV-0036706_46	phrog_16490	43.5	0.00000000000089	N/A	unknown function
eggNOG-mapper	UHGV-0036706_46	476272.RUMHYD_01770	66.2	0.000000000113	N/A	N/A
PHROG	UHGV-0036706_47	phrog_11037	48.7	0.0000000000001	N/A	unknown function
UniRef90	UHGV-0036706_47	UniRef90_A0A2V2EB84	90.1	8.05e-18	EF-hand domain-containing protein	N/A
eggNOG-mapper	UHGV-0036706_47	428127.EUBDOL_01569	78.2	0.0000000000000652	N/A	N/A
structural_annotation	UHGV-0036706_47	PF08460,PF01551,NF040883,NF033202,COG0739,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_48	phrog_881	65.1	7e-19	holin	lysis
UniRef90	UHGV-0036706_48	UniRef90_UPI0018A8FD4D	72.8	0.00000000000000425	phage holin	N/A
eggNOG-mapper	UHGV-0036706_48	326426.Bbr_0299	60.1	0.000000000169	Putative phage holin Dp-1	N/A
Pfam	UHGV-0036706_48	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0036706_48	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_49	phrog_37604	82.5	4.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0036706_49	1232443.BAIA02000078_gene10	78.6	1.38e-16	N/A	N/A
eggNOG-mapper	UHGV-0036706_51	871968.DESME_08840	121.0	1.25e-24	N/A	N/A
structural_annotation	UHGV-0036706_52	PF16640,TIGR04488	N/A	N/A	N/A	N/A
KOfam	UHGV-0036706_53	K24214	46.8	0.00000000000032	OTOL1; otolin-1	N/A
PHROG	UHGV-0036706_53	phrog_366	47.1	0.00000000000043	tail fiber protein	tail
Pfam	UHGV-0036706_53	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0036706_54	K19721	66.8	4.7e-20	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0036706_54	phrog_819	97.9	3.9e-37	tail protein	tail
eggNOG-mapper	UHGV-0036706_54	290402.Cbei_3387	91.3	3.31e-19	N/A	N/A
Pfam	UHGV-0036706_54	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0036706_55	phrog_819	47.3	0.00000000000022	tail protein	tail
Pfam	UHGV-0036706_55	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0036706_57	K14059	174.1	0	int; integrase	N/A
PHROG	UHGV-0036706_57	phrog_1	161.3	0	integrase	integration and excision
UniRef90	UHGV-0036706_57	UniRef90_UPI00189AE8E1	214.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0036706_57	1123263.AUKY01000072_gene2117	129.0	6.7e-31	Phage integrase family	N/A
Pfam	UHGV-0036706_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0036706_57	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0036706_57	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0036706_58	K22300	55.7	0.0000000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0036706_58	phrog_8	58.8	1.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0036706_58	UniRef90_A0A1G6F4M6	66.6	0.00000000000494	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0036706_58	697329.Rumal_3450	57.0	0.0000000244	N/A	N/A
PADLOC	UHGV-0036706_58	retron_type_VI_hth_cluster2_1	43.9	0.000000000006	N/A	Retron
Pfam	UHGV-0036706_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0036706_58	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
eggNOG-mapper	UHGV-0036706_59	445972.ANACOL_01800	47.4	0.00000338	N/A	N/A
COG	UHGV-0036706_59	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0036706_59	PF05339,NF041951,COG1513	N/A	N/A	N/A	N/A
Pfam	UHGV-0036706_60	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0036706_62	phrog_155	78.1	1.4e-22	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036706_62	UniRef90_UPI001E498420	115.0	1.59e-28	ERF family protein	N/A
eggNOG-mapper	UHGV-0036706_62	318464.IO99_00460	95.1	1.92e-21	ERF superfamily	N/A
Pfam	UHGV-0036706_62	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0036706_62	PF04404	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_63	phrog_6244	79.8	4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0036706_63	1399942.U3PIX9_9CAUD	53.9	0.0000000638	N/A	N/A
structural_annotation	UHGV-0036706_63	PF05565	N/A	N/A	N/A	N/A
KOfam	UHGV-0036706_64	K16898	40.6	0.000000000017	addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]	N/A
PHROG	UHGV-0036706_64	phrog_298	80.3	1.1e-23	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036706_64	UniRef90_A0A3D5XTJ3	117.0	1.73e-29	Cas_Cas4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0036706_64	1399942.U3PDT7_9CAUD	93.6	7.14e-21	nuclease activity	N/A
Pfam	UHGV-0036706_64	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-0036706_64	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_65	phrog_7566	74.6	9.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0036706_65	508419.F8J187_9CAUD	64.3	0.00000000000338	N/A	N/A
PHROG	UHGV-0036706_66	phrog_1389	42.5	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-0036706_66	1347392.CCEZ01000060_gene3269	57.8	0.00000000314	N/A	N/A
structural_annotation	UHGV-0036706_66	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
KOfam	UHGV-0036706_67	K01160	54.0	0.0000000000000047	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0036706_67	phrog_1682	68.5	1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036706_67	UniRef90_F8J189	100.0	9.35e-25	Putative Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0036706_67	508419.F8J189_9CAUD	100.0	1.57e-25	magnesium ion binding	N/A
Pfam	UHGV-0036706_67	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0036706_67	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0036706_68	K03111	50.7	0.000000000000041	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0036706_68	phrog_44	55.4	0.0000000000000014	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036706_68	UniRef90_A0A6G7Y1U6	59.7	0.00000000929	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0036706_68	406818.XBJ1_3380	57.4	0.0000000228	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0036706_68	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0036706_68	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0036706_68	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0036706_69	phrog_4973	59.9	4.3e-17	N/A	unknown function
Pfam	UHGV-0036706_69	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
PHROG	UHGV-0036706_72	phrog_5968	119.6	1.6e-35	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036706_72	UniRef90_A0A1Q6LC25	165.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0036706_72	626523.GCWU000342_01039	139.0	1.57e-36	DnaD domain protein	N/A
Pfam	UHGV-0036706_72	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0036706_72	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0036706_72	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0036706_72	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A