UHGV-0037559 (vOTU-165131)

Viral Genome: UHGV-0037559

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0037559
vOTU ID	vOTU-165131
Representative Genome?	Yes
Source	Hadza
Original Genome ID	Nepal_MoBio_Fiber-Hadza-Nepal_D_19_CHE1008TZ__NODE_1272_length_28418_cov_102.932571
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	78.17 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	17
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9813
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	50.9
Jumbo Phage?	No

Genome Content
Length (bps)	28,418
GC Content	44.64%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	48
CDS Density	97%
Average CDS Length (bps)	572.50
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0037559_1	phrog_15768	63.5	4.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0037559_1	693979.Bache_0304	57.8	0.00000000257	N/A	N/A
UniRef90	UHGV-0037559_6	UniRef90_UPI001D099724	93.6	1.9e-22	N/A	N/A
eggNOG-mapper	UHGV-0037559_6	1235799.C818_04211	95.5	9.62e-23	N/A	N/A
PHROG	UHGV-0037559_8	phrog_20593	51.1	0.000000000000025	N/A	unknown function
PHROG	UHGV-0037559_11	phrog_38832	44.7	0.0000000000015	N/A	unknown function
UniRef90	UHGV-0037559_11	UniRef90_A0A0F0C7A4	82.4	3.02e-16	N/A	N/A
eggNOG-mapper	UHGV-0037559_11	397290.C810_01492	69.7	0.00000000000164	N/A	N/A
eggNOG-mapper	UHGV-0037559_13	483218.BACPEC_01162	53.5	0.0000000709	sequence-specific DNA binding	N/A
COG	UHGV-0037559_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0037559_14	665950.HMPREF1025_02540	53.1	0.00000124	N/A	N/A
PHROG	UHGV-0037559_15	phrog_424	71.3	1.2e-20	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0037559_15	UniRef90_A0A2H4JC51	437.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-0037559_15	693746.OBV_43240	522.0	0	N/A	N/A
COG	UHGV-0037559_15	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0037559_15	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_16	phrog_599	47.6	0.00000000000035	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0037559_16	UniRef90_A0A3R6FRA8	59.3	0.000000000755	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-0037559_16	97139.C824_00027	46.6	0.00000941	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0037559_16	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0037559_16	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0037559_16	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_17	phrog_954	244.3	0	DNA methyltransferase	other
UniRef90	UHGV-0037559_17	UniRef90_UPI00062C01F9	266.0	0	class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0037559_17	1321779.HMPREF1984_00119	246.0	0	methyltransferase	N/A
PADLOC	UHGV-0037559_17	MTase_II_00074	238.4	0	Type II methyltransferase	RM
Pfam	UHGV-0037559_17	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0037559_17	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0037559_17	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_18	phrog_874	185.1	0	N/A	unknown function
UniRef90	UHGV-0037559_18	UniRef90_UPI00117743A2	214.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0037559_18	632245.CLP_1629	196.0	0	N/A	N/A
structural_annotation	UHGV-0037559_18	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
KOfam	UHGV-0037559_19	K22300	49.9	0.000000000000072	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0037559_19	phrog_8	53.8	0.0000000000000022	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0037559_19	340099.Teth39_2244	57.0	0.0000000816	transcriptional regulator, XRE family	N/A
Pfam	UHGV-0037559_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0037559_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0037559_19	PF01381,PF09889,MF_00535,NF041951,COG1396,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_20	phrog_36	58.1	1.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0037559_20	UniRef90_A0A0E3JY24	60.1	0.00000000764	RNA polymerase, sigma-24 subunit, ECF subfamily	N/A
eggNOG-mapper	UHGV-0037559_20	1540257.JQMW01000004_gene433	55.1	0.0000000831	N/A	N/A
structural_annotation	UHGV-0037559_20	PF05263	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037559_22	UniRef90_A0A3E5ALY0	122.0	2.49e-35	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0037559_22	1007096.BAGW01000035_gene1350	59.3	0.0000000000502	Cro/C1-type HTH DNA-binding domain	N/A
structural_annotation	UHGV-0037559_22	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_23	phrog_8680	233.2	0	N/A	unknown function
UniRef90	UHGV-0037559_23	UniRef90_A0A3R6K733	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037559_23	411470.RUMGNA_02208	239.0	0	N/A	N/A
Pfam	UHGV-0037559_23	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0037559_23	PF14386	N/A	N/A	N/A	N/A
KOfam	UHGV-0037559_25	K07474	140.7	1.70006e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0037559_25	phrog_51	153.3	1.4013e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0037559_25	UniRef90_A0A2U2EKP1	269.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0037559_25	1314.HKU360_01494	150.0	8.40779e-45	Terminase, small subunit	N/A
Pfam	UHGV-0037559_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0037559_25	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0037559_25	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0037559_26	K06909	294.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0037559_26	phrog_3717	259.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0037559_26	UniRef90_A0A2U2EKP2	839.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0037559_26	476272.RUMHYD_02845	601.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0037559_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0037559_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0037559_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0037559_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0037559_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_27	phrog_64	378.5	0	portal protein	head and packaging
UniRef90	UHGV-0037559_27	UniRef90_A0A2U2EKQ8	868.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0037559_27	1235792.C808_05332	548.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0037559_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0037559_27	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0037559_27	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_28	phrog_115	201.0	0	minor head protein	head and packaging
UniRef90	UHGV-0037559_28	UniRef90_A0A2U2EKP8	620.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0037559_28	1235792.C808_05333	263.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0037559_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0037559_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0037559_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037559_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037559_29	UniRef90_A0A2U2EKU5	193.0	0	Thioredoxin domain-containing protein	N/A
Pfam	UHGV-0037559_29	PF00085	N/A	N/A	Thioredoxin	Thioredoxin
COG	UHGV-0037559_29	COG3118	N/A	N/A	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	N/A
structural_annotation	UHGV-0037559_29	PF00085,MF_01835,TIGR01068,COG0526	N/A	N/A	N/A	N/A
KOfam	UHGV-0037559_30	K07584	45.4	0.0000000000016	N/A	N/A
PHROG	UHGV-0037559_30	phrog_4478	41.2	0.000000000025	peptidase	other
Pfam	UHGV-0037559_30	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0037559_30	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037559_30	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_31	phrog_172	138.6	4.60004e-41	head scaffolding protein	head and packaging
UniRef90	UHGV-0037559_31	UniRef90_UPI001652AD6D	124.0	8.65e-32	N/A	N/A
eggNOG-mapper	UHGV-0037559_31	476272.RUMHYD_02853	114.0	6.75e-29	N/A	N/A
Pfam	UHGV-0037559_31	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0037559_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_32	phrog_544	160.6	0	major head protein	head and packaging
UniRef90	UHGV-0037559_32	UniRef90_A0A0A1ELG8	211.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0037559_32	476272.RUMHYD_02854	273.0	0	N/A	N/A
structural_annotation	UHGV-0037559_32	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_33	phrog_132	64.2	1.9e-18	head-tail adaptor	connector
UniRef90	UHGV-0037559_33	UniRef90_UPI001CF82054	106.0	9.85e-28	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0037559_33	1235792.C808_05341	108.0	3.04e-29	N/A	N/A
structural_annotation	UHGV-0037559_33	PF05135	N/A	N/A	N/A	N/A
Pfam	UHGV-0037559_34	PF19586	N/A	N/A	N/A	DUF6093
structural_annotation	UHGV-0037559_34	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_35	phrog_5	57.4	3.9e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0037559_35	UniRef90_UPI00189A8F38	119.0	1.87e-32	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0037559_35	742722.HMPREF9463_00249	116.0	3.63e-32	N/A	N/A
Pfam	UHGV-0037559_35	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0037559_35	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_36	phrog_176	59.7	4.7e-17	tail terminator	connector
UniRef90	UHGV-0037559_36	UniRef90_UPI0005B2B1E6	135.0	3.33e-38	N/A	N/A
eggNOG-mapper	UHGV-0037559_36	1347392.CCEZ01000005_gene1240	135.0	5.58e-39	N/A	N/A
Pfam	UHGV-0037559_36	PF16807	N/A	N/A	N/A	DUF5072
structural_annotation	UHGV-0037559_36	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_37	phrog_1407	157.2	0	major tail protein	tail
UniRef90	UHGV-0037559_37	UniRef90_A0A2U2EKQ1	340.0	0	Antigen A	N/A
eggNOG-mapper	UHGV-0037559_37	1235792.C808_05345	209.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0037559_37	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0037559_37	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-0037559_37	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0037559_37	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037559_38	1235792.C808_05346	63.2	0.0000000000135	N/A	N/A
structural_annotation	UHGV-0037559_38	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_39	phrog_7423	98.6	3.8e-29	N/A	unknown function
UniRef90	UHGV-0037559_39	UniRef90_R5KP14	82.8	1.19e-18	BH3519 protein	N/A
eggNOG-mapper	UHGV-0037559_39	1347392.CCEZ01000005_gene1243	80.9	3.43e-18	N/A	N/A
PHROG	UHGV-0037559_40	phrog_1533	280.5	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0037559_40	180332.JTGN01000004_gene2272	329.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0037559_40	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0037559_40	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0037559_40	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0037559_40	TIGR01760	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037559_41	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_42	phrog_23052	363.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0037559_42	483218.BACPEC_01320	365.0	0	N/A	N/A
structural_annotation	UHGV-0037559_42	PF14879,PF09931,NF033848,NF033147,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0037559_43	phrog_19291	135.3	9.19952e-42	N/A	unknown function
eggNOG-mapper	UHGV-0037559_43	879305.HMPREF9290_0127	137.0	1.11e-32	N/A	N/A
structural_annotation	UHGV-0037559_43	PF02191,COG3823	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037559_44	665956.HMPREF1032_03261	52.8	0.00000406	N/A	N/A
PHROG	UHGV-0037559_46	phrog_937	41.0	0.000000000035	hemolysin	other
UniRef90	UHGV-0037559_46	UniRef90_R5GGW2	60.5	0.00000000104	Phosphoglucosamine mutase	N/A
eggNOG-mapper	UHGV-0037559_46	1298920.KI911353_gene2670	62.8	0.0000000000236	N/A	N/A
PHROG	UHGV-0037559_47	phrog_443	59.7	8e-17	holin	lysis
UniRef90	UHGV-0037559_47	UniRef90_A0A2U2ELA1	114.0	1e-31	Membrane protein	N/A
eggNOG-mapper	UHGV-0037559_47	626523.GCWU000342_01012	94.0	2.92e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0037559_47	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0037559_47	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0037559_48	K07273	172.4	0	acm; lysozyme	N/A
PHROG	UHGV-0037559_48	phrog_291	144.5	9.69699e-43	endolysin	lysis
UniRef90	UHGV-0037559_48	UniRef90_A0A174GRH8	241.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0037559_48	33035.JPJF01000043_gene994	211.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0037559_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0037559_48	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0037559_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0037559_48	PF01183,PF01471,COG3757	N/A	N/A	N/A	N/A