UHGV-0043488 (vOTU-147823)

Viral Genome: UHGV-0043488

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0043488
vOTU ID	vOTU-147823
Representative Genome?	Yes
Source	GPD
Original Genome ID	ivig_2969
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	69.02 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9768
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	32.23
Jumbo Phage?	No

Genome Content
Length (bps)	22,397
GC Content	37.90%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	35
CDS Density	94%
Average CDS Length (bps)	598.89
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 69.02)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0043488_1	762984.HMPREF9445_02509	209.0	0	Phage minor structural protein	N/A
COG	UHGV-0043488_1	COG4926	N/A	N/A	Phage-related protein	N/A
eggNOG-mapper	UHGV-0043488_2	1347393.HG726020_gene885	155.0	9.05e-37	N/A	N/A
structural_annotation	UHGV-0043488_2	PF05113,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_3	phrog_24676	66.3	3.8e-19	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0043488_3	1236514.BAKL01000051_gene3690	291.0	0	tape measure	N/A
COG	UHGV-0043488_3	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0043488_4	phrog_16333	41.4	0.000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0043488_5	1347393.HG726020_gene889	68.2	0.000000000000136	N/A	N/A
structural_annotation	UHGV-0043488_5	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_6	phrog_1407	123.7	8.6e-37	major tail protein	tail
UniRef90	UHGV-0043488_6	UniRef90_A0A515ILP0	224.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0043488_6	1236514.BAKL01000051_gene3692	175.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0043488_6	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
structural_annotation	UHGV-0043488_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0043488_7	UniRef90_A0A6I0SCX3	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-0043488_7	1236514.BAKL01000051_gene3693	147.0	7.70714e-44	N/A	N/A
Pfam	UHGV-0043488_7	PF11367	N/A	N/A	N/A	DUF3168
structural_annotation	UHGV-0043488_7	PF11367,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0043488_8	1236514.BAKL01000051_gene3694	160.0	0	N/A	N/A
structural_annotation	UHGV-0043488_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_9	phrog_25	64.0	2.4e-18	head closure Hc1	connector
UniRef90	UHGV-0043488_9	UniRef90_A0A015YER2	140.0	2.98995e-41	Phage head-tail joining family protein	N/A
eggNOG-mapper	UHGV-0043488_9	908937.Prede_1351	62.0	0.0000000000453	Phage head-tail joining protein	N/A
Pfam	UHGV-0043488_9	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0043488_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0043488_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_10	phrog_40	73.5	2.3e-21	head-tail adaptor Ad1	connector
UniRef90	UHGV-0043488_10	UniRef90_A0A1Y4V591	180.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0043488_10	1347393.HG726020_gene894	67.0	0.000000000000347	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0043488_10	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0043488_10	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0043488_10	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_11	phrog_617	110.4	1.7e-32	major head protein	head and packaging
UniRef90	UHGV-0043488_11	UniRef90_U6RGH7	722.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0043488_11	1236514.BAKL01000051_gene3695	193.0	0	Phage capsid family	N/A
Pfam	UHGV-0043488_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0043488_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0043488_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0043488_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0043488_12	K06904	92.0	9.5e-27	N/A	N/A
PHROG	UHGV-0043488_12	phrog_80	98.7	1e-28	head maturation protease	head and packaging
UniRef90	UHGV-0043488_12	UniRef90_U6RIL0	397.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0043488_12	1236514.BAKL01000051_gene3697	229.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0043488_12	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0043488_12	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0043488_12	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_13	phrog_12	214.2	0	portal protein	head and packaging
UniRef90	UHGV-0043488_13	UniRef90_U6RHR0	849.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-0043488_13	1236514.BAKL01000051_gene3699	293.0	0	Phage portal protein	N/A
Pfam	UHGV-0043488_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0043488_13	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0043488_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0043488_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_14	phrog_9	307.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0043488_14	UniRef90_A0A015YEI1	991.0	0	Phage Terminase family protein	N/A
eggNOG-mapper	UHGV-0043488_14	266762.HQ36_02085	648.0	0	Phage Terminase	N/A
Pfam	UHGV-0043488_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0043488_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0043488_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0043488_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_15	phrog_361	63.2	4.6e-18	terminase small subunit	head and packaging
structural_annotation	UHGV-0043488_15	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0043488_16	K07451	54.8	0.0000000000000021	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0043488_16	phrog_144	63.7	3.8e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0043488_16	UniRef90_U6RGI2	228.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0043488_16	1219585.HMPREF1631_02735	56.6	0.0000000106	HNH nucleases	N/A
Pfam	UHGV-0043488_16	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0043488_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0043488_17	phrog_27435	43.0	0.0000000000061	N/A	unknown function
PHROG	UHGV-0043488_19	phrog_874	94.9	1.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0043488_19	1121098.HMPREF1534_01095	214.0	0	N/A	N/A
structural_annotation	UHGV-0043488_19	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
UniRef90	UHGV-0043488_20	UniRef90_UPI00189D42CE	63.5	0.0000000000528	N/A	N/A
eggNOG-mapper	UHGV-0043488_22	1236514.BAKL01000051_gene3705	124.0	1.54e-35	N/A	N/A
KOfam	UHGV-0043488_23	K02315	54.5	0.0000000000000013	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0043488_23	phrog_50	67.3	2.7e-19	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0043488_23	UniRef90_A0A415M3J3	171.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0043488_23	1121097.JCM15093_3228	205.0	0	DNA-dependent DNA replication	N/A
COG	UHGV-0043488_23	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0043488_23	PF01695,MF_01509,NF005304,COG1485	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_24	phrog_19658	56.3	3.3e-16	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0043488_24	272559.BF9343_2332	176.0	0	DnaD domain protein	N/A
Pfam	UHGV-0043488_24	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0043488_24	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0043488_25	phrog_190	90.8	1.5e-26	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0043488_25	UniRef90_A0A2M9USX5	183.0	0	N/A	N/A
eggNOG-mapper	UHGV-0043488_25	1236514.BAKL01000051_gene3708	152.0	0	N/A	N/A
Pfam	UHGV-0043488_25	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0043488_25	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_26	phrog_19572	218.0	0	N/A	unknown function
UniRef90	UHGV-0043488_26	UniRef90_A0A413JZK9	254.0	0	N/A	N/A
eggNOG-mapper	UHGV-0043488_26	1121100.JCM6294_526	240.0	0	COG NOG14445 non supervised orthologous group	N/A
Pfam	UHGV-0043488_26	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-0043488_26	PF14902	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_27	phrog_149	90.2	1.9e-26	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0043488_27	UniRef90_U6RIM4	540.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0043488_27	1236514.BAKL01000051_gene3710	379.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0043488_27	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0043488_27	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_28	phrog_21613	190.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0043488_28	1120998.AUFC01000030_gene2214	127.0	8.5e-35	N/A	N/A
structural_annotation	UHGV-0043488_28	PF17426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0043488_29	PF09947,NF041288,COG4855	N/A	N/A	N/A	N/A
PHROG	UHGV-0043488_31	phrog_18744	55.2	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0043488_31	1121101.HMPREF1532_02568	54.7	0.0000000108	N/A	N/A
AcrCatalog	UHGV-0043488_32	cluster_11057	64.7	5.23e-18	NA	N/A
structural_annotation	UHGV-0043488_33	PF10827	N/A	N/A	N/A	N/A
KOfam	UHGV-0043488_34	K01356	46.6	0.00000000000057	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0043488_34	phrog_4	91.0	1.9e-26	transcriptional repressor	transcription regulation
UniRef90	UHGV-0043488_34	UniRef90_U6RK86	440.0	0	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0043488_34	742726.HMPREF9448_02842	161.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0043488_34	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0043488_34	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0043488_34	PF00717,PF13560,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0043488_35	UniRef90_A0A017N932	165.0	0	Putative lipoprotein	N/A