UHGV-0056305 (vOTU-019074)

Viral Genome: UHGV-0056305

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0056305
vOTU ID	vOTU-019074
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_32795
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	68.57 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9762
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.37
Jumbo Phage?	No

Genome Content
Length (bps)	38,504
GC Content	37.87%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	88%
Average CDS Length (bps)	641.26
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0056305_1	K01160	48.6	0.00000000000023	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0056305_1	phrog_140	49.5	0.000000000000041	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056305_1	UniRef90_UPI00125CCC78	244.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0056305_1	435590.BVU_2854	138.0	1.36999e-40	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0056305_1	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0056305_1	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_2	phrog_16304	74.7	1.4e-21	N/A	unknown function
UniRef90	UHGV-0056305_2	UniRef90_UPI00125CB8AB	508.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056305_2	694427.Palpr_2953	110.0	1.27e-26	N/A	N/A
Pfam	UHGV-0056305_2	PF19808	N/A	N/A	N/A	DUF6291
PHROG	UHGV-0056305_3	phrog_29547	79.4	4.6e-23	N/A	unknown function
UniRef90	UHGV-0056305_3	UniRef90_F3PDU6	67.0	0.00000000011	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0056305_3	1268240.ATFI01000008_gene2559	67.0	0.0000000000109	N/A	N/A
Pfam	UHGV-0056305_3	PF20338	N/A	N/A	N/A	DUF6633
UniRef90	UHGV-0056305_6	UniRef90_UPI001E296F76	120.0	1.62e-32	host-nuclease inhibitor Gam family protein	N/A
eggNOG-mapper	UHGV-0056305_6	357276.EL88_11460	254.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056305_7	547042.BACCOPRO_02157	70.1	0.000000000000014	MutS domain I	N/A
COG	UHGV-0056305_7	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
PHROG	UHGV-0056305_9	phrog_924	45.4	0.0000000000019	N/A	unknown function
UniRef90	UHGV-0056305_9	UniRef90_A0A6A2RVW0	235.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056305_9	411901.BACCAC_01195	58.5	0.00000000351	N/A	N/A
Pfam	UHGV-0056305_9	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0056305_9	PF04448	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056305_14	411901.BACCAC_01173	115.0	2.43e-31	N/A	N/A
PHROG	UHGV-0056305_16	phrog_28300	48.0	0.00000000000018	N/A	unknown function
structural_annotation	UHGV-0056305_17	PF17574,TIGR04550	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_18	phrog_7314	64.9	1.4e-18	N/A	unknown function
PHROG	UHGV-0056305_19	phrog_12005	93.3	2.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0056305_21	411476.BACOVA_03907	52.8	0.0000000462	N/A	N/A
KOfam	UHGV-0056305_22	K07474	69.6	9.5e-20	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0056305_22	phrog_51	78.7	1e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0056305_22	UniRef90_A0A7J5MNL6	332.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0056305_22	1122971.BAME01000163_gene6624	260.0	0	Terminase small subunit	N/A
Pfam	UHGV-0056305_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0056305_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0056305_22	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0056305_23	K06909	238.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0056305_23	phrog_3717	117.4	9.1e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0056305_23	UniRef90_A0A4S2FPD3	1280.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0056305_23	1122971.BAME01000163_gene6625	1099.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0056305_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0056305_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0056305_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0056305_23	PF04466,PF17289,MF_04145,MF_00034,TIGR01547,TIGR01630,COG1783,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056305_24	UniRef90_A0A6M4K7H8	168.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0056305_24	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
structural_annotation	UHGV-0056305_24	PF02796	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056305_26	UniRef90_A0A6N2S5R7	1722.0	0	SGNH_hydro domain-containing protein	N/A
eggNOG-mapper	UHGV-0056305_26	357276.EL88_11200	71.2	0.0000000012	lipolytic protein G-D-S-L family	N/A
Pfam	UHGV-0056305_26	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0056305_26	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-0056305_27	PF16640	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056305_28	1227276.HMPREF9148_00156	58.2	0.0000000289	N/A	N/A
PHROG	UHGV-0056305_29	phrog_38044	162.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0056305_29	357276.EL88_11220	1217.0	0	Phage minor structural protein	N/A
COG	UHGV-0056305_29	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0056305_29	PF04862,PF21634,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_30	phrog_26568	153.1	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0056305_30	1122971.BAME01000119_gene6178	476.0	0	N/A	N/A
structural_annotation	UHGV-0056305_30	PF02927,PF19266	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_31	phrog_22157	515.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0056305_31	1122971.BAME01000119_gene6177	574.0	0	N/A	N/A
structural_annotation	UHGV-0056305_31	PF05629,PF17642,PF06605,TIGR01646,COG3157	N/A	N/A	N/A	N/A
KOfam	UHGV-0056305_33	K20283	58.0	4.8e-21	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0056305_33	phrog_14295	208.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0056305_33	1122971.BAME01000119_gene6173	1390.0	0	Phage-related minor tail protein	N/A
COG	UHGV-0056305_33	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0056305_34	phrog_4002	70.2	9.1e-21	N/A	unknown function
UniRef90	UHGV-0056305_34	UniRef90_I9F8W1	456.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056305_34	449673.BACSTE_00566	311.0	0	N/A	N/A
Pfam	UHGV-0056305_34	PF14730	N/A	N/A	N/A	DUF4468
structural_annotation	UHGV-0056305_34	PF14730	N/A	N/A	N/A	N/A
KOfam	UHGV-0056305_36	K07741	59.9	9.5e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-0056305_36	phrog_129	102.3	6e-30	transcriptional regulator	transcription regulation
UniRef90	UHGV-0056305_36	UniRef90_I9QJ75	541.0	0	KilA-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0056305_36	1127696.HMPREF9134_00474	211.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0056305_36	PF04383	N/A	N/A	KilA-N domain	KilA-N
Pfam	UHGV-0056305_36	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0056305_36	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0056305_36	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056305_37	UniRef90_C3QUD1	56.2	0.000000126	Phage regulatory protein, Rha family	N/A
KOfam	UHGV-0056305_39	K07741	106.6	5.4e-31	antB; anti-repressor protein	N/A
PHROG	UHGV-0056305_39	phrog_130	193.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0056305_39	UniRef90_A0A7J5MMJ7	518.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0056305_39	1236504.HMPREF2132_11510	290.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0056305_39	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0056305_39	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0056305_39	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0056305_39	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_40	phrog_129	42.7	0.0000000000058	transcriptional regulator	transcription regulation
UniRef90	UHGV-0056305_40	UniRef90_A0A4S2FP64	473.0	0	KilA-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0056305_40	411901.BACCAC_01204	301.0	0	KilA-N domain	N/A
Pfam	UHGV-0056305_40	PF04383	N/A	N/A	KilA-N domain	KilA-N
structural_annotation	UHGV-0056305_40	PF04383,NF033622	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056305_41	411476.BACOVA_03935	46.6	0.00000387	N/A	N/A
PHROG	UHGV-0056305_42	phrog_6195	62.5	5.2e-18	tail protein	tail
UniRef90	UHGV-0056305_42	UniRef90_I8VT13	299.0	0	ABC transporter C family member 12	N/A
eggNOG-mapper	UHGV-0056305_42	1122971.BAME01000143_gene6484	207.0	0	N/A	N/A
PHROG	UHGV-0056305_44	phrog_24272	218.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0056305_44	1122971.BAME01000143_gene6482	509.0	0	N/A	N/A
structural_annotation	UHGV-0056305_44	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_45	phrog_23418	135.0	4.1e-40	N/A	unknown function
eggNOG-mapper	UHGV-0056305_45	1122971.BAME01000143_gene6481	229.0	0	N/A	N/A
structural_annotation	UHGV-0056305_45	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_46	phrog_26639	67.9	1.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0056305_46	1122971.BAME01000143_gene6480	166.0	0	N/A	N/A
structural_annotation	UHGV-0056305_46	PF20459	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_48	phrog_10	147.8	8.68805e-44	major head protein	head and packaging
UniRef90	UHGV-0056305_48	UniRef90_A0A015ZJH7	491.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0056305_48	449673.BACSTE_00580	459.0	0	Phage capsid family	N/A
Pfam	UHGV-0056305_48	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0056305_48	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0056305_48	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0056305_48	PF05065,MF_04113,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0056305_49	K06904	157.6	0	N/A	N/A
PHROG	UHGV-0056305_49	phrog_80	147.8	9.10844e-44	head maturation protease	head and packaging
UniRef90	UHGV-0056305_49	UniRef90_I8VW13	465.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0056305_49	449673.BACSTE_00581	293.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0056305_49	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0056305_49	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0056305_49	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0056305_49	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0056305_50	phrog_12	78.0	8.5e-23	portal protein	head and packaging
UniRef90	UHGV-0056305_50	UniRef90_A0A069S1U3	907.0	0	Phage portal family protein	N/A
eggNOG-mapper	UHGV-0056305_50	449673.BACSTE_00582	354.0	0	Phage portal protein	N/A
Pfam	UHGV-0056305_50	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0056305_50	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056305_53	1121129.KB903373_gene447	90.1	1.3e-19	N/A	N/A