UHGV-0057808 (vOTU-160847)

Viral Genome: UHGV-0057808

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0057808
vOTU ID	vOTU-160847
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_63639
Associated Biosample	SAMEA2338862
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	HMM-based
CheckV Completeness	58.82 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9635
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	16.73
Jumbo Phage?	No

Genome Content
Length (bps)	33,106
GC Content	43.03%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	45
CDS Density	91%
Average CDS Length (bps)	671.13
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0057808_2	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_3	phrog_422	136.5	2e-40	major head protein	head and packaging
UniRef90	UHGV-0057808_3	UniRef90_UPI001C115D36	273.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0057808_3	1408437.JNJN01000001_gene1710	228.0	0	N/A	N/A
Pfam	UHGV-0057808_3	PF13287	N/A	N/A	Fn3 associated	Fn3_assoc
structural_annotation	UHGV-0057808_3	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_5	phrog_3287	58.9	6.1e-18	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0057808_5	1232449.BAHV02000016_gene1816	229.0	0	N/A	N/A
structural_annotation	UHGV-0057808_5	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_6	K07473	73.6	4.4e-21	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-0057808_6	phrog_2737	53.5	0.0000000000000034	N/A	unknown function
UniRef90	UHGV-0057808_6	UniRef90_A0A349YTL5	124.0	2.5e-35	Type II toxin-antitoxin system antitoxin, RelB/DinJ family	N/A
eggNOG-mapper	UHGV-0057808_6	1235799.C818_00775	123.0	8.47e-36	RelB antitoxin	N/A
Pfam	UHGV-0057808_6	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-0057808_6	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-0057808_6	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0057808_6	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_7	K19158	142.3	1.90016e-42	yoeB; toxin YoeB [EC:3.1.-.-]	N/A
PHROG	UHGV-0057808_7	phrog_1213	56.4	7.3e-16	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0057808_7	UniRef90_A0A3E3HWR6	161.0	0	Putative mRNA interferase YoeB	N/A
eggNOG-mapper	UHGV-0057808_7	221027.JO40_01030	157.0	0	addiction module toxin, Txe YoeB family	N/A
Pfam	UHGV-0057808_7	PF06769	N/A	N/A	YoeB-like toxin of bacterial type II toxin-antitoxin system	YoeB_toxin
NCBIFam	UHGV-0057808_7	TIGR02116.1	N/A	N/A	Txe/YoeB family addiction module toxin	N/A
COG	UHGV-0057808_7	COG4115	N/A	N/A	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	N/A
structural_annotation	UHGV-0057808_7	PF06769,TIGR02116,COG4115	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_8	phrog_63	86.1	5.9e-25	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0057808_8	UniRef90_A0A1C5P786	192.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0057808_8	1540257.JQMW01000004_gene443	181.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0057808_8	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0057808_8	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0057808_8	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0057808_8	PF03374,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_9	K06909	65.5	3.9e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0057808_9	phrog_2	116.3	4.6e-34	terminase large subunit	head and packaging
UniRef90	UHGV-0057808_9	UniRef90_UPI001F401ABC	399.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0057808_9	696281.Desru_1088	225.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0057808_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0057808_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0057808_9	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_10	K07474	94.5	2.5e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0057808_10	phrog_51	85.5	6.8e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0057808_10	UniRef90_A0A368VQR5	114.0	1.22e-28	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0057808_10	1268072.PSAB_06050	86.7	7.29e-19	terminase small subunit	N/A
Pfam	UHGV-0057808_10	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0057808_10	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0057808_12	phrog_3584	248.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0057808_12	1321814.HMPREF9089_00921	152.0	1.76999e-40	N/A	N/A
KOfam	UHGV-0057808_13	K03111	124.1	1.9e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0057808_13	phrog_44	110.7	1.7e-32	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0057808_13	UniRef90_A0A316LFY0	128.0	2.06e-35	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0057808_13	1449126.JQKL01000046_gene2063	105.0	1.55e-27	Single-strand binding protein family	N/A
Pfam	UHGV-0057808_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0057808_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0057808_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0057808_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0057808_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_14	K22300	41.2	4.3e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0057808_14	phrog_8	87.1	4e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-0057808_14	UniRef90_UPI0015E5D115	57.8	0.0000000696	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0057808_14	246194.CHY_0550	56.2	0.000000231	transcriptional regulator, XRE family	N/A
Pfam	UHGV-0057808_14	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-0057808_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0057808_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0057808_16	phrog_954	189.0	0	DNA methyltransferase	other
UniRef90	UHGV-0057808_16	UniRef90_A0A498CN80	284.0	0	Class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0057808_16	1280698.AUJS01000007_gene1028	273.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0057808_16	MTase_II_00074	194.3	0	Type II methyltransferase	RM
Pfam	UHGV-0057808_16	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0057808_16	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0057808_16	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0057808_19	PF11998	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_21	phrog_824	124.2	6.1e-37	N/A	unknown function
UniRef90	UHGV-0057808_21	UniRef90_R9J0I1	116.0	5.54e-31	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0057808_21	397288.C806_00096	116.0	9.3e-32	VRR_NUC	N/A
Pfam	UHGV-0057808_21	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
UniRef90	UHGV-0057808_24	UniRef90_A0A416HDQ7	76.3	1.92e-16	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0057808_24	1226325.HMPREF1548_06746	83.6	6.78e-20	N/A	N/A
structural_annotation	UHGV-0057808_24	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_28	phrog_585	75.4	8.5e-22	N/A	unknown function
UniRef90	UHGV-0057808_28	UniRef90_A0A7X2T8T8	69.3	0.000000000000832	N/A	N/A
eggNOG-mapper	UHGV-0057808_28	1194526.A284_08075	59.7	0.000000000872	N/A	N/A
Pfam	UHGV-0057808_28	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0057808_28	PF10711,MF_01819,TIGR04176,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_33	K22300	42.4	0.000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0057808_33	phrog_8	67.0	4.3e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0057808_33	UniRef90_A0A3A9ICV8	101.0	1.07e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0057808_33	445972.ANACOL_01815	84.7	6.29e-21	Transcriptional	N/A
Pfam	UHGV-0057808_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0057808_33	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0057808_33	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_36	phrog_22978	362.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0057808_36	1410650.JHWL01000003_gene2814	256.0	0	N/A	N/A
Pfam	UHGV-0057808_36	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
PHROG	UHGV-0057808_39	phrog_156	103.3	1.1e-30	portal protein	head and packaging
eggNOG-mapper	UHGV-0057808_39	1408437.JNJN01000001_gene1708	317.0	0	N/A	N/A
structural_annotation	UHGV-0057808_39	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0057808_41	K03749	73.3	5.1e-21	dedD; DedD protein	N/A
PHROG	UHGV-0057808_41	phrog_7698	299.1	0	endolysin	lysis
UniRef90	UHGV-0057808_41	UniRef90_A0A1Y4MNS1	355.0	0	Cell division protein	N/A
eggNOG-mapper	UHGV-0057808_41	665956.HMPREF1032_00684	291.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0057808_41	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0057808_41	PF05036	N/A	N/A	SPOR domain	SPOR
Pfam	UHGV-0057808_41	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0057808_41	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0057808_41	PF05036,PF01510,PF08230,MF_04111,MF_02022,NF008758,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-0057808_43	phrog_962	67.0	3.4e-19	holin	lysis
UniRef90	UHGV-0057808_43	UniRef90_A0A6P1M9E5	92.8	6.19e-23	Phage holin	N/A
eggNOG-mapper	UHGV-0057808_43	553973.CLOHYLEM_04415	84.0	2.78e-20	Bacteriophage holin	N/A
Pfam	UHGV-0057808_43	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0057808_43	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0057808_43	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0057808_43	COG5546	N/A	N/A	N/A	N/A
Pfam	UHGV-0057808_44	PF11192	N/A	N/A	N/A	DUF2977
Pfam	UHGV-0057808_45	PF12789	N/A	N/A	Phage tail repeat like	PTR