UHGV-0058358 (vOTU-040353)

Viral Genome: UHGV-0058358

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0058358
vOTU ID	vOTU-040353
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_39950
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	74.4 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9745
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	38.54
Jumbo Phage?	No

Genome Content
Length (bps)	31,084
GC Content	40.34%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	46
CDS Density	92%
Average CDS Length (bps)	623.74
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 74.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0058358_1	UniRef90_A0A1C6HHE5	498.0	0	BppU_N domain-containing protein	N/A
Pfam	UHGV-0058358_1	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0058358_2	phrog_11105	43.5	0.000000000005	N/A	unknown function
PHROG	UHGV-0058358_4	phrog_18110	212.0	0	N/A	unknown function
UniRef90	UHGV-0058358_4	UniRef90_A0A373KYA3	1136.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_4	1280689.AUJC01000007_gene3306	161.0	1.01e-38	Phage minor structural protein	N/A
Pfam	UHGV-0058358_4	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0058358_4	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0058358_4	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0058358_4	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-0058358_5	UniRef90_A0A1G4WVH7	192.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0058358_5	1347392.CCEZ01000045_gene7	61.6	0.0000000139	phage tail	N/A
COG	UHGV-0058358_5	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0058358_5	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_6	phrog_19074	466.7	0	N/A	unknown function
UniRef90	UHGV-0058358_6	UniRef90_A0A413QHE6	1549.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0058358_6	33035.JPJF01000033_gene2265	413.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0058358_6	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0058358_6	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0058358_6	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0058358_6	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
UniRef90	UHGV-0058358_7	UniRef90_A0A1G4WVI6	86.3	1.56e-19	Beta-lactamase inhibitor (BLIP)	N/A
eggNOG-mapper	UHGV-0058358_7	1280390.CBQR020000086_gene1875	51.2	0.00000197	N/A	N/A
PHROG	UHGV-0058358_8	phrog_706	158.2	0	N/A	unknown function
UniRef90	UHGV-0058358_8	UniRef90_A0A1G4WU45	187.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0058358_8	1499683.CCFF01000017_gene2567	166.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0058358_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0058358_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_9	phrog_4450	95.7	4.5e-28	N/A	unknown function
UniRef90	UHGV-0058358_9	UniRef90_A0A413QHF8	259.0	0	AP endonuclease	N/A
eggNOG-mapper	UHGV-0058358_9	1280692.AUJL01000004_gene838	85.5	9.16e-20	N/A	N/A
Pfam	UHGV-0058358_9	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0058358_9	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_10	phrog_3099	185.6	0	N/A	unknown function
UniRef90	UHGV-0058358_10	UniRef90_A0A3P6KYP0	170.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0058358_10	411490.ANACAC_00772	187.0	0	N/A	N/A
structural_annotation	UHGV-0058358_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_11	phrog_3266	150.3	5.60519e-45	tail completion	connector
UniRef90	UHGV-0058358_11	UniRef90_A0A373KYC6	281.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0058358_11	641112.ACOK01000073_gene2899	111.0	2.16e-29	N/A	N/A
structural_annotation	UHGV-0058358_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_12	phrog_556	96.3	2.5e-28	minor head protein	head and packaging
UniRef90	UHGV-0058358_12	UniRef90_A0A413QH49	240.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0058358_12	883114.HMPREF9709_01190	124.0	2.8e-35	Minor capsid protein	N/A
Pfam	UHGV-0058358_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0058358_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_13	phrog_3366	79.4	4.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-0058358_13	1151292.QEW_4533	55.1	0.000000119	N/A	N/A
Pfam	UHGV-0058358_13	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0058358_13	PF20536,TIGR01563,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_14	phrog_541	97.6	1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0058358_14	1120998.AUFC01000030_gene2237	67.4	0.000000000000668	N/A	N/A
PHROG	UHGV-0058358_15	phrog_212	224.7	0	major head protein	head and packaging
UniRef90	UHGV-0058358_15	UniRef90_A0A373KYA5	632.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0058358_15	935836.JAEL01000021_gene1494	358.0	0	N/A	N/A
structural_annotation	UHGV-0058358_15	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_16	phrog_194	77.3	4.7e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0058358_16	UniRef90_UPI001967FAB3	100.0	2.72e-23	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0058358_16	1401067.HMPREF0872_00300	62.4	0.00000000181	Phage minor structural protein GP20	N/A
Pfam	UHGV-0058358_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0058358_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_17	phrog_419	65.6	1e-22	N/A	unknown function
UniRef90	UHGV-0058358_17	UniRef90_UPI001E40EA70	94.4	3.22e-24	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_17	203119.Cthe_2457	91.7	6.65e-24	N/A	N/A
Pfam	UHGV-0058358_17	PF14083	N/A	N/A	PGDYG protein	PGDYG
UniRef90	UHGV-0058358_18	UniRef90_A0A373KYU2	133.0	7.63e-40	Glutamyl-tRNA amidotransferase	N/A
PHROG	UHGV-0058358_19	phrog_581	319.3	0	minor head protein	head and packaging
UniRef90	UHGV-0058358_19	UniRef90_A0A373KZU7	1062.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0058358_19	641112.ACOK01000073_gene2890	387.0	0	N/A	N/A
Pfam	UHGV-0058358_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0058358_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0058358_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_20	phrog_533	329.5	0	portal protein	head and packaging
UniRef90	UHGV-0058358_20	UniRef90_A0A3D0XCF1	908.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0058358_20	411490.ANACAC_00782	344.0	0	N/A	N/A
structural_annotation	UHGV-0058358_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0058358_21	K06909	123.8	2e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0058358_21	phrog_2	150.5	1.82169e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0058358_21	UniRef90_A0A373L0G3	821.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0058358_21	693746.OBV_18030	462.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0058358_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0058358_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0058358_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0058358_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0058358_23	K02601	86.4	4.1e-25	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-0058358_23	phrog_6386	88.4	7.4e-26	transcription antiterminator	transcription regulation
UniRef90	UHGV-0058358_23	UniRef90_A0A413QHD3	333.0	0	NGN domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_23	1123489.AUAN01000019_gene1519	62.8	0.000000000634	Participates in transcription elongation, termination and antitermination	N/A
Pfam	UHGV-0058358_23	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0058358_23	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0058358_23	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_24	phrog_426	94.2	1.8e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0058358_24	UniRef90_A0A373L007	309.0	0	N/A	N/A
eggNOG-mapper	UHGV-0058358_24	411902.CLOBOL_06314	162.0	0	N/A	N/A
Pfam	UHGV-0058358_24	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0058358_24	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_25	phrog_25462	108.7	3.1e-32	N/A	unknown function
UniRef90	UHGV-0058358_25	UniRef90_A0A413QHC4	214.0	0	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-0058358_25	1160721.RBI_II00547	102.0	1.09e-26	N/A	N/A
structural_annotation	UHGV-0058358_25	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_27	phrog_532	51.7	0.000000000000017	late transcriptional activator	transcription regulation
UniRef90	UHGV-0058358_27	UniRef90_A0A373L0N7	186.0	0	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_27	411483.FAEPRAA2165_03398	94.4	6.9e-24	Mor transcription activator family	N/A
Pfam	UHGV-0058358_27	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0058358_27	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0058358_27	PF08765,NF040785,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_28	phrog_286	59.2	8.8e-17	N/A	unknown function
UniRef90	UHGV-0058358_28	UniRef90_A0A373KYV3	322.0	0	N/A	N/A
eggNOG-mapper	UHGV-0058358_28	552398.HMPREF0866_03127	130.0	3.46e-36	N/A	N/A
Pfam	UHGV-0058358_28	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0058358_28	PF06252	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0058358_29	645991.Sgly_0760	100.0	1.57e-23	N/A	N/A
KOfam	UHGV-0058358_30	K06284	45.2	0.0000000000017	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0058358_30	phrog_4681	46.6	0.00000000000046	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0058358_30	UniRef90_A0A413QH66	174.0	0	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_30	742733.HMPREF9469_02890	71.6	0.00000000000000185	toxin-antitoxin pair type II binding	N/A
NCBIFam	UHGV-0058358_30	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0058358_30	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0058358_30	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_32	phrog_5671	68.3	1.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0058358_32	293826.Amet_0399	109.0	4e-29	N/A	N/A
KOfam	UHGV-0058358_34	K07132	65.2	1.1e-18	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0058358_34	phrog_296	140.1	1.99993e-41	DNA transposition protein	integration and excision
UniRef90	UHGV-0058358_34	UniRef90_A0A413QHD1	588.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_34	1160721.RBI_II00554	218.0	0	AAA domain	N/A
Pfam	UHGV-0058358_34	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0058358_34	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0058358_34	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0058358_35	phrog_310	376.1	0	transposase	integration and excision
UniRef90	UHGV-0058358_35	UniRef90_A0A413QHZ6	1216.0	0	MerR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0058358_35	445972.ANACOL_00518	710.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0058358_35	TnsB_0_V-K	58.1	7.3e-17	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0058358_35	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0058358_35	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0058358_35	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0058358_35	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0058358_36	PF10735	N/A	N/A	N/A	N/A
KOfam	UHGV-0058358_39	K23779	54.7	0.0000000000000025	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0058358_39	phrog_8	46.6	0.00000000000072	transcriptional regulator	transcription regulation
UniRef90	UHGV-0058358_39	UniRef90_A0A1C6GZN2	128.0	1.37e-37	Anaerobic benzoate catabolism transcriptional regulator	N/A
eggNOG-mapper	UHGV-0058358_39	431943.CKL_1947	57.0	0.00000000869	sequence-specific DNA binding	N/A
Pfam	UHGV-0058358_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0058358_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0058358_39	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0058358_40	K01356	81.0	2.4e-23	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0058358_40	phrog_4	134.8	7.4e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-0058358_40	UniRef90_A0A1C6GZH6	413.0	0	LexA repressor	N/A
eggNOG-mapper	UHGV-0058358_40	1160721.RBI_II00559	110.0	3.74e-27	Peptidase S24-like	N/A
Pfam	UHGV-0058358_40	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-0058358_40	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0058358_40	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0058358_40	PF00717,PF12844,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0058358_44	1410650.JHWL01000017_gene2365	62.8	0.0000000033	N/A	N/A
Pfam	UHGV-0058358_44	PF20234	N/A	N/A	N/A	DUF6591
structural_annotation	UHGV-0058358_44	PF20234	N/A	N/A	N/A	N/A
UniRef90	UHGV-0058358_45	UniRef90_A0A6I3PQP9	333.0	0	DZANK-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_45	1469948.JPNB01000002_gene2828	71.6	0.00000000000383	N/A	N/A
Pfam	UHGV-0058358_45	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
KOfam	UHGV-0058358_46	K07729	55.7	0.0000000000000011	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0058358_46	phrog_8	53.2	0.0000000000000067	transcriptional regulator	transcription regulation
UniRef90	UHGV-0058358_46	UniRef90_A0A1Q6S5H3	211.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0058358_46	1262449.CP6013_2053	81.3	1.82e-18	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0058358_46	retron_type_VI_hth_cluster2_1	47.3	0.00000000000057	N/A	Retron
Pfam	UHGV-0058358_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0058358_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0058358_46	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A