UHGV-0075091 (vOTU-029658)

Viral Genome: UHGV-0075091

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0075091
vOTU ID	vOTU-029658
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_129028
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	67.72 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.979
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	21.37
Jumbo Phage?	No

Genome Content
Length (bps)	34,889
GC Content	58.33%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	54
CDS Density	94%
Average CDS Length (bps)	608.61
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0075091_1	742740.HMPREF9474_00056	55.8	0.00000219	N/A	N/A
UniRef90	UHGV-0075091_2	UniRef90_UPI00196212E2	362.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075091_2	397291.C804_03513	348.0	0	N/A	N/A
Pfam	UHGV-0075091_2	PF12083	N/A	N/A	N/A	DUF3560
structural_annotation	UHGV-0075091_2	PF12083,PF19881,TIGR00739,COG1862	N/A	N/A	N/A	N/A
Pfam	UHGV-0075091_5	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
eggNOG-mapper	UHGV-0075091_6	411470.RUMGNA_00254	79.7	1.25e-18	N/A	N/A
PHROG	UHGV-0075091_7	phrog_355	61.4	1.5e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075091_7	UniRef90_A0A3E3I255	183.0	0	N/A	N/A
eggNOG-mapper	UHGV-0075091_7	97138.C820_00250	130.0	3.81e-38	N/A	N/A
Pfam	UHGV-0075091_7	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0075091_7	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0075091_9	K21471	50.4	0.000000000000045	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0075091_9	UniRef90_K1TIU6	82.0	0.00000000000000695	Protein containing SH3, type 3 domain protein	N/A
eggNOG-mapper	UHGV-0075091_9	871963.Desdi_1740	55.5	0.00000487	NLP P60 protein	N/A
Pfam	UHGV-0075091_9	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0075091_9	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0075091_9	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0075091_9	PF00877,PF18342,NF033742,COG0791,COG3103	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0075091_11	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0075091_11	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0075091_13	K24213	60.4	2.1e-17	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0075091_13	phrog_5073	65.4	6.7e-19	tail fiber protein	tail
Pfam	UHGV-0075091_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0075091_15	phrog_24267	51.8	0.000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0075091_15	742742.HMPREF9452_00376	95.5	8.17e-21	tail collar domain protein	N/A
COG	UHGV-0075091_15	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0075091_17	phrog_4311	52.9	7.6e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0075091_17	1536769.P40081_01145	92.8	5.99e-17	Prophage endopeptidase tail	N/A
Pfam	UHGV-0075091_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0075091_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0075091_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075091_18	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_19	phrog_1535	138.5	5.29999e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0075091_19	1235800.C819_00476	263.0	0	tape measure	N/A
COG	UHGV-0075091_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0075091_19	PF20155,MF_04138,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_23	phrog_885	116.3	2.4e-34	major tail protein	tail
UniRef90	UHGV-0075091_23	UniRef90_A0A843J9F0	60.5	0.000000163	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0075091_23	411465.PEPMIC_00741	114.0	4.4e-29	N/A	N/A
structural_annotation	UHGV-0075091_23	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075091_24	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_25	phrog_17977	68.6	7.5e-20	N/A	unknown function
UniRef90	UHGV-0075091_25	UniRef90_UPI00141211AB	85.1	4.84e-19	head-tail adaptor protein	N/A
Pfam	UHGV-0075091_25	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0075091_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_27	phrog_29	122.9	2.8e-36	major head protein	head and packaging
UniRef90	UHGV-0075091_27	UniRef90_K1TJK6	509.0	0	Phage protein (Fragment)	N/A
eggNOG-mapper	UHGV-0075091_27	1232443.BAIA02000078_gene29	239.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0075091_27	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
Pfam	UHGV-0075091_27	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0075091_27	PF03864,PF18316,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_28	phrog_909	69.6	4.2e-20	major head protein	head and packaging
UniRef90	UHGV-0075091_28	UniRef90_K1TUL5	147.0	1.02295e-43	N/A	N/A
eggNOG-mapper	UHGV-0075091_28	1497679.EP56_02915	66.6	0.0000000000011	N/A	N/A
PHROG	UHGV-0075091_29	phrog_194	55.2	0.0000000000000015	head scaffolding protein	head and packaging
UniRef90	UHGV-0075091_29	UniRef90_R7ICU6	65.1	0.00000000145	Fibronectin autolysin	N/A
structural_annotation	UHGV-0075091_29	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_30	phrog_5	51.0	0.000000000000043	tail completion or Neck1 protein	connector
UniRef90	UHGV-0075091_30	UniRef90_UPI00065E143B	58.9	0.00000000853	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0075091_30	509191.AEDB02000075_gene2797	51.6	0.000000988	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0075091_30	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_31	phrog_859	79.7	2.8e-23	portal protein	head and packaging
UniRef90	UHGV-0075091_31	UniRef90_K1T614	307.0	0	Minor head protein	N/A
Pfam	UHGV-0075091_31	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
structural_annotation	UHGV-0075091_31	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_32	phrog_64	108.9	1.3e-32	portal protein	head and packaging
UniRef90	UHGV-0075091_32	UniRef90_K1SG85	572.0	0	Phage portal protein, SPP1	N/A
eggNOG-mapper	UHGV-0075091_32	673376.F2VHW1_9CAUD	226.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0075091_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0075091_32	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_33	phrog_38	155.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0075091_33	UniRef90_D2J053	378.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0075091_33	1140001.I571_01829	386.0	0	N/A	N/A
structural_annotation	UHGV-0075091_33	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075091_35	PF17941,MF_01917,NF010490,COG3886	N/A	N/A	N/A	N/A
KOfam	UHGV-0075091_36	K15256	111.0	1.4e-32	cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]	N/A
PHROG	UHGV-0075091_36	phrog_4752	153.0	1.4013e-45	tRNA methyltransferase	other
UniRef90	UHGV-0075091_36	UniRef90_A0A7V9U5L6	171.0	0	Methyltransferase domain-containing protein	N/A
eggNOG-mapper	UHGV-0075091_36	1226322.HMPREF1545_03542	147.0	3.75968e-42	trans-aconitate 2-methyltransferase activity	N/A
Pfam	UHGV-0075091_36	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0075091_36	COG4106	N/A	N/A	Trans-aconitate methyltransferase	N/A
eggNOG-mapper	UHGV-0075091_37	1226322.HMPREF1545_03542	55.5	0.000000011	trans-aconitate 2-methyltransferase activity	N/A
COG	UHGV-0075091_37	COG4106	N/A	N/A	Trans-aconitate methyltransferase	N/A
KOfam	UHGV-0075091_38	K00558	166.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0075091_38	phrog_116	164.8	0	DNA methyltransferase	other
UniRef90	UHGV-0075091_38	UniRef90_A0A843MF59	333.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0075091_38	1121382.JQKG01000001_gene2513	292.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0075091_38	MTase_II_00164	183.6	0	Type II methyltransferase	RM
Pfam	UHGV-0075091_38	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0075091_38	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0075091_38	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0075091_39	K03497	71.0	3e-20	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0075091_39	phrog_620	164.5	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075091_39	UniRef90_A0A2N5KYN6	171.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0075091_39	1416334.X2CXX2_9CAUD	163.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0075091_39	MTase_II_00015	94.3	2.4e-27	Type II methyltransferase	RM
Pfam	UHGV-0075091_39	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-0075091_39	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_42	phrog_27197	50.7	0.000000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0075091_42	886882.PPSC2_p0048	56.6	0.000000541	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0075091_42	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0075091_42	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_44	phrog_36	49.8	0.00000000000007	transcriptional regulator	transcription regulation
Pfam	UHGV-0075091_44	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0075091_44	PF04545,MF_00674,NF001072,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0075091_46	phrog_824	140.4	6.39973e-42	N/A	unknown function
UniRef90	UHGV-0075091_46	UniRef90_A0A645CPG3	151.0	7.00649e-45	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0075091_46	768710.DesyoDRAFT_5233	125.0	1.61e-35	VRR-NUC domain	N/A
Pfam	UHGV-0075091_46	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0075091_46	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-0075091_53	K02314	308.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0075091_53	phrog_19	247.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075091_53	UniRef90_A0A3B8XWU8	285.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0075091_53	1307759.JOMJ01000003_gene1934	171.0	2.8026e-45	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	N/A
Pfam	UHGV-0075091_53	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0075091_53	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0075091_53	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0075091_53	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A