UHGV-0090242 (vOTU-084938)

Viral Genome: UHGV-0090242

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0090242
vOTU ID	vOTU-084938
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_192621
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9735
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	32.66
Jumbo Phage?	No

Genome Content
Length (bps)	41,807
GC Content	45.15%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	74
CDS Density	93%
Average CDS Length (bps)	522.57
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0090242_6	PF03370	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090242_7	742725.HMPREF9450_02124	2634.0	0	N/A	N/A
structural_annotation	UHGV-0090242_7	PF05954,PF09212,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_8	phrog_32115	131.0	7.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-0090242_8	742725.HMPREF9450_02123	923.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0090242_8	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0090242_11	phrog_1407	41.4	0.000000000023	major tail protein	tail
COG	UHGV-0090242_11	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0090242_11	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_13	phrog_5	41.6	0.000000000013	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0090242_13	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_15	phrog_442	54.7	0.0000000000000018	head-tail adaptor	connector
Pfam	UHGV-0090242_15	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0090242_15	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
PHROG	UHGV-0090242_17	phrog_10	51.2	0.000000000000013	major head protein	head and packaging
UniRef90	UHGV-0090242_17	UniRef90_A0A1V5ID18	136.0	6.69e-32	Phage capsid family protein	N/A
Pfam	UHGV-0090242_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-0090242_17	PF05065,PF15188,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0090242_18	K06904	131.9	6.8e-39	N/A	N/A
PHROG	UHGV-0090242_18	phrog_80	124.3	1.5e-36	head maturation protease	head and packaging
UniRef90	UHGV-0090242_18	UniRef90_G5H929	372.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0090242_18	742725.HMPREF9450_02115	372.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0090242_18	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0090242_18	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0090242_18	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0090242_18	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090242_21	UniRef90_A0A8D9PFB4	123.0	2.22e-33	Peptidase M76 family	N/A
eggNOG-mapper	UHGV-0090242_21	742725.HMPREF9450_02112	293.0	0	N/A	N/A
PHROG	UHGV-0090242_24	phrog_38431	142.2	1.19951e-42	N/A	unknown function
UniRef90	UHGV-0090242_24	UniRef90_F3QSP5	145.0	2.76056e-42	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0090242_24	762968.HMPREF9441_00551	150.0	5.60519e-45	N/A	N/A
PHROG	UHGV-0090242_26	phrog_28898	57.9	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0090242_26	742725.HMPREF9450_02107	328.0	0	N/A	N/A
structural_annotation	UHGV-0090242_26	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_27	phrog_31654	92.1	5.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0090242_27	742725.HMPREF9450_02106	226.0	0	N/A	N/A
PHROG	UHGV-0090242_28	phrog_16490	199.9	0	N/A	unknown function
UniRef90	UHGV-0090242_28	UniRef90_A0A7M1RVI5	246.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0090242_28	742725.HMPREF9450_02105	436.0	0	N/A	N/A
PHROG	UHGV-0090242_30	phrog_2468	81.2	1.6e-23	head morphogenesis	head and packaging
COG	UHGV-0090242_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0090242_30	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_31	phrog_12	91.8	6.6e-27	portal protein	head and packaging
eggNOG-mapper	UHGV-0090242_31	742725.HMPREF9450_02103	872.0	0	Portal protein	N/A
Pfam	UHGV-0090242_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0090242_31	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0090242_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0090242_32	K06909	252.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0090242_32	phrog_3717	106.4	2e-31	terminase large subunit	head and packaging
UniRef90	UHGV-0090242_32	UniRef90_G5H916	967.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0090242_32	742725.HMPREF9450_02102	967.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0090242_32	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0090242_32	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0090242_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
KOfam	UHGV-0090242_33	K07474	77.4	4e-22	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0090242_33	phrog_51	79.1	6e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0090242_33	UniRef90_A0A316NYX6	215.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0090242_33	742725.HMPREF9450_02101	315.0	0	COG NOG24226 non supervised orthologous group	N/A
Pfam	UHGV-0090242_33	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0090242_33	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0090242_33	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0090242_34	K22299	41.3	0.000000000032	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0090242_34	UniRef90_G5H914	149.0	1.4013e-45	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0090242_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0090242_35	UniRef90_A0A1F3LUH0	65.9	0.00000000152	Fib_succ_major domain-containing protein	N/A
structural_annotation	UHGV-0090242_35	PF09603,TIGR02145	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090242_36	1121100.JCM6294_1073	53.9	0.000000227	N/A	N/A
Pfam	UHGV-0090242_36	PF08299	N/A	N/A	Bacterial dnaA protein helix-turn-helix	Bac_DnaA_C
COG	UHGV-0090242_36	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0090242_36	PF08299,NF004688	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090242_37	UniRef90_UPI00191FB118	54.3	0.00000186	retroviral-like aspartic protease family protein	N/A
Pfam	UHGV-0090242_37	PF13650	N/A	N/A	Aspartyl protease	Asp_protease_2
COG	UHGV-0090242_37	COG3577	N/A	N/A	Predicted aspartyl protease	N/A
PHROG	UHGV-0090242_38	phrog_8684	84.2	3.3e-28	N/A	unknown function
UniRef90	UHGV-0090242_38	UniRef90_A0A413NPN2	92.4	9.57e-22	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0090242_38	742767.HMPREF9456_02048	85.5	8.16e-20	YopX protein	N/A
Pfam	UHGV-0090242_38	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0090242_38	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0090242_38	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_41	phrog_1273	61.4	1.6e-17	N/A	unknown function
PHROG	UHGV-0090242_43	phrog_874	97.1	8.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0090242_43	762968.HMPREF9441_00541	161.0	0	N/A	N/A
structural_annotation	UHGV-0090242_43	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
KOfam	UHGV-0090242_44	K00571	169.1	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0090242_44	phrog_67	163.9	0	DNA methyltransferase	other
UniRef90	UHGV-0090242_44	UniRef90_A0A413JXI2	401.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0090242_44	865938.Weevi_0267	357.0	0	DNA methylase	N/A
PADLOC	UHGV-0090242_44	MTase_II_00157	76.6	5.8e-37	Type II methyltransferase	RM
Pfam	UHGV-0090242_44	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0090242_44	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0090242_44	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_46	phrog_10841	50.5	0.00000000000004	N/A	unknown function
eggNOG-mapper	UHGV-0090242_47	742725.HMPREF9450_02087	110.0	5.4e-29	N/A	N/A
PHROG	UHGV-0090242_53	phrog_2514	91.2	1.4e-26	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0090242_53	UniRef90_A0A385YPN7	95.5	7.66e-20	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0090242_53	1121947.AUHK01000002_gene919	93.6	1.1e-19	DnaD domain protein	N/A
COG	UHGV-0090242_53	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0090242_53	PF09681,NF033788,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_54	phrog_5034	126.5	1.5e-37	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0090242_54	UniRef90_A0A412WPV2	169.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0090242_54	742725.HMPREF9450_02079	273.0	0	N/A	N/A
Pfam	UHGV-0090242_54	PF05766	N/A	N/A	Bacteriophage Lambda NinG protein	NinG
COG	UHGV-0090242_54	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0090242_54	PF05766	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0090242_55	742725.HMPREF9450_02078	288.0	0	N/A	N/A
KOfam	UHGV-0090242_56	K01143	70.2	3.7e-20	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-0090242_56	phrog_149	116.9	1.7e-34	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0090242_56	UniRef90_G5H8Z1	439.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0090242_56	742725.HMPREF9450_02077	439.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0090242_56	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0090242_56	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0090242_57	K07455	199.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0090242_57	phrog_148	212.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0090242_57	UniRef90_UPI00097AF175	334.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0090242_57	742725.HMPREF9450_02076	611.0	0	RecT family	N/A
Pfam	UHGV-0090242_57	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0090242_57	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0090242_57	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0090242_57	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_60	phrog_7964	246.2	0	N/A	unknown function
UniRef90	UHGV-0090242_60	UniRef90_UPI001032F014	152.0	4.27957e-42	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-0090242_60	762982.HMPREF9442_00534	88.2	4.81e-20	N/A	N/A
Pfam	UHGV-0090242_60	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
structural_annotation	UHGV-0090242_60	NF040481	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0090242_62	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-0090242_65	phrog_11227	133.9	6.89999e-40	protease	other
UniRef90	UHGV-0090242_65	UniRef90_A0A841MSP4	150.0	2.66247e-44	Regulator of protease activity HflC (Stomatin/prohibitin superfamily)	N/A
eggNOG-mapper	UHGV-0090242_65	742725.HMPREF9450_02070	228.0	0	N/A	N/A
UniRef90	UHGV-0090242_67	UniRef90_G5H8Y2	273.0	0	HTH luxR-type domain-containing protein	N/A
structural_annotation	UHGV-0090242_67	PF00196,MF_00674,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0090242_69	K22300	51.8	0.000000000000018	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0090242_69	phrog_4	49.2	0.000000000000039	transcriptional repressor	transcription regulation
UniRef90	UHGV-0090242_69	UniRef90_A0A496DMM0	99.4	2.7e-22	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0090242_69	395493.BegalDRAFT_3179	53.9	0.000000538	Helix-turn-helix domain	N/A
Pfam	UHGV-0090242_69	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0090242_69	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-0090242_71	UniRef90_A0A396MBG1	145.0	5.74532e-44	N/A	N/A
eggNOG-mapper	UHGV-0090242_71	742725.HMPREF9450_02061	164.0	0	N/A	N/A
Pfam	UHGV-0090242_71	PF16476	N/A	N/A	N/A	DUF5053
structural_annotation	UHGV-0090242_71	PF16476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0090242_72	UniRef90_F0R799	53.5	0.0000000229	Type III restriction protein res subunit	N/A
eggNOG-mapper	UHGV-0090242_72	667015.Bacsa_2379	53.5	0.00000000384	SPTR ArsR-family transcription regulator	N/A
UniRef90	UHGV-0090242_73	UniRef90_A0A845KIF3	56.6	0.000000017	N/A	N/A
KOfam	UHGV-0090242_74	K04763	88.0	1.4e-25	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0090242_74	phrog_1	91.9	7.6e-27	integrase	integration and excision
UniRef90	UHGV-0090242_74	UniRef90_G5H8X3	559.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0090242_74	742725.HMPREF9450_02059	559.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0090242_74	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0090242_74	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A