UHGV-0093596 (vOTU-014750)

Viral Genome: UHGV-0093596

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0093596
vOTU ID	vOTU-014750
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_183447
Associated Biosample	SAMEA3449170
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	91.49 (High-quality)
Trimmed?	No
CheckV Viral Markers	18
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9722
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	43.33
Jumbo Phage?	No

Genome Content
Length (bps)	34,881
GC Content	42.70%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	54
CDS Density	94%
Average CDS Length (bps)	606.06
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0093596_1	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis
eggNOG-mapper	UHGV-0093596_2	1235800.C819_02253	58.5	0.0000000747	N/A	N/A
KOfam	UHGV-0093596_3	K03698	46.9	0.00000000000044	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0093596_3	phrog_28876	135.2	4.2e-40	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0093596_3	UniRef90_A0A373LVX6	233.0	0	HD domain-containing protein	N/A
eggNOG-mapper	UHGV-0093596_3	97139.C824_00737	172.0	0	PFAM HD domain	N/A
Pfam	UHGV-0093596_3	PF01966	N/A	N/A	HD domain	HD
COG	UHGV-0093596_3	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0093596_3	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_5	phrog_15077	111.3	1.8e-32	N/A	unknown function
UniRef90	UHGV-0093596_5	UniRef90_A0A3A6HZA9	117.0	2.15e-25	N/A	N/A
eggNOG-mapper	UHGV-0093596_5	1280698.AUJS01000007_gene1019	107.0	8.89e-23	N/A	N/A
structural_annotation	UHGV-0093596_5	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_7	phrog_7566	103.1	1.3e-30	N/A	unknown function
UniRef90	UHGV-0093596_7	UniRef90_A0A8D9UHC0	102.0	2.06e-26	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0093596_7	693746.OBV_24070	95.1	4.82e-24	N/A	N/A
PHROG	UHGV-0093596_8	phrog_8470	221.7	0	N/A	unknown function
UniRef90	UHGV-0093596_8	UniRef90_UPI001E5C1444	116.0	7.72e-24	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0093596_8	1256908.HMPREF0373_02098	130.0	2.33e-29	PcfJ-like protein	N/A
Pfam	UHGV-0093596_8	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0093596_8	PF14284	N/A	N/A	N/A	N/A
UniRef90	UHGV-0093596_9	UniRef90_UPI0008BD6C31	86.3	1.67e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0093596_9	1235792.C808_00065	87.4	1.37e-19	N/A	N/A
structural_annotation	UHGV-0093596_10	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_11	phrog_3584	211.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0093596_11	UniRef90_A0A1I5LZL1	179.0	0	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0093596_11	1196322.A370_05744	195.0	0	N/A	N/A
structural_annotation	UHGV-0093596_11	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_14	phrog_11237	50.2	4.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0093596_14	411461.DORFOR_01161	67.4	0.000000000000933	N/A	N/A
UniRef90	UHGV-0093596_15	UniRef90_A0A1Q6V1V0	68.9	0.000000000000181	N/A	N/A
structural_annotation	UHGV-0093596_15	PF20037	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_16	phrog_874	159.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0093596_16	411468.CLOSCI_00298	180.0	0	N/A	N/A
structural_annotation	UHGV-0093596_16	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_17	phrog_585	94.7	9.4e-28	N/A	unknown function
UniRef90	UHGV-0093596_17	UniRef90_A0A7G5MSN3	134.0	5.68e-38	N/A	N/A
eggNOG-mapper	UHGV-0093596_17	1033744.CAEL01000029_gene1306	99.4	1.34e-24	N/A	N/A
Pfam	UHGV-0093596_17	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0093596_17	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_21	phrog_750	88.3	6.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0093596_21	97139.C824_00051	113.0	3.04e-31	N/A	N/A
structural_annotation	UHGV-0093596_21	PF03444,COG5045	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_25	K18830	62.6	8.6e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0093596_25	phrog_8	46.2	0.00000000000078	transcriptional regulator	transcription regulation
UniRef90	UHGV-0093596_25	UniRef90_UPI001D06FE9D	161.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0093596_25	411470.RUMGNA_02181	101.0	6.33e-26	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0093596_25	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0093596_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0093596_25	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_27	K23779	60.5	4.7e-17	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0093596_27	phrog_3	45.6	0.0000000000026	transcriptional repressor	transcription regulation
UniRef90	UHGV-0093596_27	UniRef90_A0A1M6B7T2	55.5	0.0000000227	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0093596_27	410358.Mlab_0037	50.4	0.000000345	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0093596_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0093596_27	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
Pfam	UHGV-0093596_28	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0093596_30	phrog_1220	122.0	2.1e-36	head protein	head and packaging
UniRef90	UHGV-0093596_30	UniRef90_R6SMG3	79.3	0.000000000000249	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0093596_30	1145276.T479_19910	74.7	0.0000000000016	N/A	N/A
PHROG	UHGV-0093596_31	phrog_538	240.7	0	minor tail protein	tail
UniRef90	UHGV-0093596_31	UniRef90_A0A1I7FBJ0	171.0	0	Virus ReqiPepy6 Gp37-like protein	N/A
eggNOG-mapper	UHGV-0093596_31	428125.CLOLEP_01424	167.0	0	N/A	N/A
Pfam	UHGV-0093596_31	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0093596_31	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_32	phrog_33	58.9	1.3e-16	distal tail protein Dit	tail
UniRef90	UHGV-0093596_32	UniRef90_UPI001D088A46	182.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0093596_32	428125.CLOLEP_01423	117.0	2.07e-28	Phage tail protein	N/A
Pfam	UHGV-0093596_32	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-0093596_32	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_33	K20478	72.2	9.8e-22	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0093596_33	phrog_5218	309.4	0	N/A	unknown function
UniRef90	UHGV-0093596_33	UniRef90_A0A1Y4GYF9	437.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0093596_33	908340.HMPREF9406_2570	342.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0093596_33	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0093596_33	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0093596_33	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_35	phrog_88	96.7	2.4e-28	major tail protein	tail
UniRef90	UHGV-0093596_35	UniRef90_A0A843GGC8	117.0	2.13e-28	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0093596_35	1120971.AUCA01000066_gene599	57.4	0.000000177	Phage tail tube protein	N/A
NCBIFam	UHGV-0093596_35	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0093596_35	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0093596_36	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0093596_37	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0093596_38	UniRef90_A0A417W8T5	129.0	1.8e-36	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0093596_38	1536774.H70357_10645	53.1	0.00000019	N/A	N/A
Pfam	UHGV-0093596_38	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0093596_38	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0093596_38	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0093596_39	UniRef90_UPI001E432EFF	70.1	0.0000000000000659	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0093596_39	768704.Desmer_4461	55.1	0.00000000781	N/A	N/A
Pfam	UHGV-0093596_39	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0093596_39	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_40	phrog_10	158.3	0	major head protein	head and packaging
UniRef90	UHGV-0093596_40	UniRef90_A0A417W9T2	427.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0093596_40	411470.RUMGNA_02065	415.0	0	N/A	N/A
Pfam	UHGV-0093596_40	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0093596_40	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0093596_40	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0093596_40	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_41	K06904	120.3	2.4e-35	N/A	N/A
PHROG	UHGV-0093596_41	phrog_80	150.4	1.68156e-44	head maturation protease	head and packaging
UniRef90	UHGV-0093596_41	UniRef90_R6YQV2	257.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-0093596_41	927704.SELR_18200	201.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0093596_41	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0093596_41	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0093596_41	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0093596_41	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_42	phrog_12	135.1	4.79999e-40	portal protein	head and packaging
UniRef90	UHGV-0093596_42	UniRef90_R6Z5U3	454.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0093596_42	457396.CSBG_01047	314.0	0	Portal protein	N/A
Pfam	UHGV-0093596_42	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0093596_42	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0093596_42	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_43	phrog_9	285.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0093596_43	UniRef90_R7A0H4	833.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0093596_43	1211817.CCAT010000007_gene1040	505.0	0	Terminase	N/A
Pfam	UHGV-0093596_43	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0093596_43	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0093596_43	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0093596_43	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_46	K10062	44.2	0.0000000000016	COLEC12; collectin sub-family member 12	N/A
PHROG	UHGV-0093596_46	phrog_6320	61.0	2.3e-17	tail fiber protein	tail
Pfam	UHGV-0093596_46	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0093596_47	K16628	80.7	5.5e-24	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0093596_47	phrog_6320	123.7	1.9e-36	tail fiber protein	tail
Pfam	UHGV-0093596_47	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0093596_48	phrog_4581	104.4	4e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0093596_48	UniRef90_A0A417W8X1	304.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0093596_48	1157490.EL26_20750	195.0	0	HNH endonuclease	N/A
Pfam	UHGV-0093596_48	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0093596_48	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0093596_48	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_49	phrog_51	44.7	0.00000000000033	terminase small subunit	head and packaging
UniRef90	UHGV-0093596_49	UniRef90_UPI001D08E9BA	129.0	2.15e-36	terminase small subunit	N/A
eggNOG-mapper	UHGV-0093596_49	702450.CUW_0530	67.8	0.000000000000581	Terminase Small Subunit	N/A
Pfam	UHGV-0093596_49	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0093596_49	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0093596_49	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_50	K01448	126.3	3.1e-37	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0093596_50	phrog_435	198.3	0	endolysin	lysis
UniRef90	UHGV-0093596_50	UniRef90_A0A173UCF2	265.0	0	N-acetylmuramoyl-L-alanine amidase LytC	N/A
eggNOG-mapper	UHGV-0093596_50	411490.ANACAC_00597	195.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0093596_50	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0093596_50	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0093596_50	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0093596_50	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0093596_51	phrog_1863	63.7	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0093596_51	1232453.BAIF02000059_gene1610	62.8	0.00000000000166	N/A	N/A
PHROG	UHGV-0093596_52	phrog_881	60.6	2e-17	holin	lysis
UniRef90	UHGV-0093596_52	UniRef90_A0A4Q7P349	82.0	4.21e-19	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0093596_52	1095750.HMPREF9970_2289	76.3	1.43e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-0093596_52	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0093596_52	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-0093596_54	K07080	298.2	0	N/A	N/A
PHROG	UHGV-0093596_54	phrog_6856	52.8	0.0000000000000056	N/A	unknown function
UniRef90	UHGV-0093596_54	UniRef90_A0A1Q6ND58	610.0	0	C4-dicarboxylate ABC transporter substrate-binding protein	N/A
eggNOG-mapper	UHGV-0093596_54	483218.BACPEC_02950	353.0	0	NMT1-like family	N/A
Pfam	UHGV-0093596_54	PF16868	N/A	N/A	NMT1-like family	NMT1_3
NCBIFam	UHGV-0093596_54	TIGR02122.1	N/A	N/A	TAXI family TRAP transporter solute-binding subunit	N/A
COG	UHGV-0093596_54	COG2358	N/A	N/A	N/A	N/A