UHGV-0102994 (vOTU-045470)

Viral Genome: UHGV-0102994

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0102994
vOTU ID	vOTU-045470
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_231283
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	8
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9789
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	6.59
Jumbo Phage?	No

Genome Content
Length (bps)	38,273
GC Content	57.59%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	57
CDS Density	90%
Average CDS Length (bps)	603.37
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0102994_1	UniRef90_A0A8D9PDT5	133.0	4.26e-38	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0102994_4	phrog_3136	142.5	1.3004e-42	N/A	unknown function
UniRef90	UHGV-0102994_4	UniRef90_UPI001CBCD733	163.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0102994_4	97139.C824_00742	52.4	0.0000052	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0102994_4	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0102994_4	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0102994_4	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_5	phrog_757	118.0	6.4e-35	DNA methyltransferase	other
UniRef90	UHGV-0102994_5	UniRef90_A0A8D9PDD1	405.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-0102994_5	622312.ROSEINA2194_01264	365.0	0	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0102994_5	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0102994_5	PF00145,MF_00341,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_7	K01160	65.0	2.1e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0102994_7	phrog_140	120.9	9.2e-36	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102994_7	UniRef90_A0A7X9D805	106.0	5.58e-27	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0102994_7	857293.CAAU_0790	87.0	4.26e-20	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0102994_7	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0102994_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0102994_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102994_10	UniRef90_A0A1W2C6A5	54.7	0.000000851	Loader and inhibitor of phage G40P	N/A
structural_annotation	UHGV-0102994_10	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_11	K03111	40.2	0.000000000074	ssb; single-strand DNA-binding protein	N/A
UniRef90	UHGV-0102994_11	UniRef90_A0A4D7AYE9	116.0	1.02e-30	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0102994_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
structural_annotation	UHGV-0102994_11	PF00436,MF_00984,TIGR04418,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_12	phrog_10048	53.4	8.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0102994_12	1304880.JAGB01000002_gene2238	101.0	3.58e-23	N/A	N/A
structural_annotation	UHGV-0102994_12	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_13	phrog_298	64.5	1.1e-19	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102994_13	UniRef90_UPI00058C5410	100.0	6.34e-23	PD-(D/E)XK nuclease family protein	N/A
COG	UHGV-0102994_13	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0102994_13	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102994_15	PF14354,TIGR03655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102994_18	PF18359,COG4466	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102994_19	PF12728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0102994_20	760568.Desku_0919	109.0	4.67e-27	N/A	N/A
structural_annotation	UHGV-0102994_20	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_22	K22300	51.5	0.000000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0102994_22	phrog_8	48.2	0.00000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-0102994_22	UniRef90_A0A7X9EDY6	74.7	2.77e-16	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0102994_22	1688.BCUN_1339	58.9	0.00000000237	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0102994_22	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0102994_22	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0102994_23	K22300	52.3	0.000000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0102994_23	phrog_2967	50.8	0.000000000000033	transcriptional regulator	transcription regulation
UniRef90	UHGV-0102994_23	UniRef90_K1TCM8	95.1	4.32e-23	Protein containing Helix-turn-helix type 3 domain protein	N/A
Pfam	UHGV-0102994_23	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0102994_23	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0102994_23	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_24	K14059	190.1	0	int; integrase	N/A
PHROG	UHGV-0102994_24	phrog_1	188.7	0	integrase	integration and excision
UniRef90	UHGV-0102994_24	UniRef90_A0A4D7AYG4	530.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0102994_24	693746.OBV_01970	412.0	0	Phage integrase family	N/A
Pfam	UHGV-0102994_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0102994_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0102994_24	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102994_27	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_29	phrog_15863	164.7	0	N/A	unknown function
UniRef90	UHGV-0102994_29	UniRef90_A0A810QAR9	295.0	0	Molecular chaperone DnaJ	N/A
eggNOG-mapper	UHGV-0102994_29	693746.OBV_01780	250.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0102994_29	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0102994_30	phrog_34845	40.7	0.000000000035	N/A	unknown function
Pfam	UHGV-0102994_31	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
eggNOG-mapper	UHGV-0102994_32	693746.OBV_01760	87.0	4.26e-22	N/A	N/A
eggNOG-mapper	UHGV-0102994_33	693746.OBV_01750	107.0	1.47e-27	N/A	N/A
eggNOG-mapper	UHGV-0102994_35	1519439.JPJG01000011_gene57	134.0	2.01e-38	N/A	N/A
structural_annotation	UHGV-0102994_35	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102994_36	UniRef90_A0A4D7B2L2	62.4	0.0000000000128	Cysteine-rich KTR domain-containing protein	N/A
Pfam	UHGV-0102994_36	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0102994_36	PF14205,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_38	phrog_422	102.8	3.4e-30	major head protein	head and packaging
UniRef90	UHGV-0102994_38	UniRef90_K1TJJ5	373.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-0102994_38	693746.OBV_01700	516.0	0	N/A	N/A
Pfam	UHGV-0102994_38	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0102994_38	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_39	K06909	137.4	1.3e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0102994_39	phrog_979	142.8	1.49939e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0102994_39	UniRef90_K1SF61	777.0	0	Terminase-like protein (Fragment)	N/A
eggNOG-mapper	UHGV-0102994_39	693746.OBV_01690	690.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0102994_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0102994_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0102994_39	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102994_40	UniRef90_A0A4D7ASB8	790.0	0	N/A	N/A
eggNOG-mapper	UHGV-0102994_40	693746.OBV_01680	732.0	0	N/A	N/A
structural_annotation	UHGV-0102994_40	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_41	phrog_156	78.2	2.2e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-0102994_41	693746.OBV_01670	783.0	0	N/A	N/A
structural_annotation	UHGV-0102994_41	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_43	phrog_22773	42.2	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0102994_43	657322.FPR_21910	62.4	0.000000000179	N/A	N/A
PHROG	UHGV-0102994_44	phrog_134	40.9	0.000000000031	N/A	unknown function
Pfam	UHGV-0102994_44	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0102994_44	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0102994_46	phrog_199	86.1	3.9e-25	holin	lysis
UniRef90	UHGV-0102994_46	UniRef90_K1UL76	257.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-0102994_46	411467.BACCAP_00280	136.0	4.68e-39	Bacteriophage holin family	N/A
Pfam	UHGV-0102994_46	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0102994_46	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0102994_46	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0102994_46	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_47	K08640	94.4	1.1e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0102994_47	phrog_18955	162.2	0	N/A	unknown function
UniRef90	UHGV-0102994_47	UniRef90_UPI001C035E39	629.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0102994_47	1235797.C816_04171	343.0	0	Peptidase M15	N/A
Pfam	UHGV-0102994_47	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0102994_47	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0102994_47	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102994_47	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0102994_48	693746.OBV_01600	160.0	2.98e-40	N/A	N/A
UniRef90	UHGV-0102994_49	UniRef90_A0A810QFN4	1131.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0102994_49	693746.OBV_01590	922.0	0	N/A	N/A
Pfam	UHGV-0102994_49	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
UniRef90	UHGV-0102994_53	UniRef90_A0A3A9FC54	68.2	0.000000000000117	Sigma-70 family RNA polymerase sigma factor	N/A
structural_annotation	UHGV-0102994_53	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0102994_54	K02647	52.0	0.0000000000000095	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-0102994_54	UniRef90_K1SN71	125.0	1.72e-36	HTH_30 domain-containing protein	N/A
eggNOG-mapper	UHGV-0102994_54	877415.JNJQ01000014_gene417	59.3	0.00000000182	sugar diacid	N/A
Pfam	UHGV-0102994_54	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-0102994_54	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0102994_54	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A