UHGV-0114180 (vOTU-098857)

Viral Genome: UHGV-0114180

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0114180
vOTU ID	vOTU-098857
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_284457
Associated Biosample	SAMEA4378252
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	65.98 (Medium-quality)
Trimmed?	Yes
CheckV Viral Markers	15
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9707
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	35.36
Jumbo Phage?	No

Genome Content
Length (bps)	25,727
GC Content	40.98%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	46
CDS Density	93%
Average CDS Length (bps)	519.91
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0114180_1	phrog_2841	320.8	0	minor head protein	head and packaging
UniRef90	UHGV-0114180_1	UniRef90_A0A6N9K285	718.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0114180_1	1209989.TepiRe1_1146	275.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0114180_1	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0114180_1	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0114180_1	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114180_1	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_2	phrog_64	366.9	0	portal protein	head and packaging
UniRef90	UHGV-0114180_2	UniRef90_A0A173W966	897.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0114180_2	877414.ATWA01000001_gene907	387.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0114180_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0114180_2	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0114180_2	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0114180_3	K06909	307.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0114180_3	phrog_3717	264.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0114180_3	UniRef90_A0A173W6A0	832.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0114180_3	1256908.HMPREF0373_00486	544.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0114180_3	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0114180_3	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0114180_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0114180_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0114180_3	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0114180_5	K07296	42.0	0.0000000000074	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0114180_5	phrog_35286	45.8	0.00000000000017	N/A	unknown function
Pfam	UHGV-0114180_5	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0114180_5	PF16967	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_6	phrog_2412	60.3	3.5e-17	N/A	unknown function
UniRef90	UHGV-0114180_6	UniRef90_UPI001C38E948	109.0	3.31e-28	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0114180_6	1125712.HMPREF1316_1524	58.2	0.00000000668	N/A	N/A
PHROG	UHGV-0114180_7	phrog_5057	61.1	2.8e-18	N/A	unknown function
PHROG	UHGV-0114180_9	phrog_940	350.4	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114180_9	UniRef90_A0A173W6N8	647.0	0	ParB-like nuclease domain	N/A
eggNOG-mapper	UHGV-0114180_9	936154.STP_1604	335.0	0	N/A	N/A
PADLOC	UHGV-0114180_9	MTase_II_00015	100.0	3.6e-29	Type II methyltransferase	RM
Pfam	UHGV-0114180_9	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0114180_9	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0114180_9	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0114180_9	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_10	phrog_36	63.5	4.4e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0114180_10	97138.C820_00221	96.3	1.47e-23	sigma factor activity	N/A
COG	UHGV-0114180_10	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0114180_10	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_11	phrog_17690	125.1	2.7e-37	N/A	unknown function
UniRef90	UHGV-0114180_11	UniRef90_A0A6L5XWF4	110.0	1.34e-28	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0114180_11	1235798.C817_03495	64.3	0.0000000000124	N/A	N/A
PHROG	UHGV-0114180_12	phrog_874	177.1	0	N/A	unknown function
UniRef90	UHGV-0114180_12	UniRef90_A0A6N7W7Q7	174.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0114180_12	632245.CLP_1629	170.0	0	N/A	N/A
structural_annotation	UHGV-0114180_12	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_14	phrog_33451	47.0	0.00000000000035	N/A	unknown function
eggNOG-mapper	UHGV-0114180_14	1235793.C809_02210	106.0	1.37e-27	N/A	N/A
structural_annotation	UHGV-0114180_17	PF06257,TIGR00739,COG4466	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114180_19	411461.DORFOR_01156	247.0	0	N/A	N/A
KOfam	UHGV-0114180_20	K00571	93.4	2.4e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0114180_20	phrog_16	231.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114180_20	UniRef90_A0A173W8R8	1649.0	0	Modification methylase MboII	N/A
eggNOG-mapper	UHGV-0114180_20	1298920.KI911353_gene2709	1385.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0114180_20	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0114180_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0114180_20	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0114180_20	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_23	phrog_9804	137.6	7.50003e-41	N/A	unknown function
UniRef90	UHGV-0114180_23	UniRef90_A0A3R6Y4B9	342.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0114180_23	585394.RHOM_14005	116.0	1.75e-30	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0114180_23	cluster_137185	109.0	1.31e-32	NA	N/A
Pfam	UHGV-0114180_23	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0114180_23	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_24	phrog_16304	110.0	2.4e-32	N/A	unknown function
UniRef90	UHGV-0114180_24	UniRef90_A0A3R6LJJ8	453.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114180_24	445972.ANACOL_03338	90.5	2.54e-18	DnaD domain protein	N/A
Pfam	UHGV-0114180_24	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0114180_24	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0114180_24	PF19808	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114180_25	457412.RSAG_00329	70.9	0.0000000000000186	N/A	N/A
PHROG	UHGV-0114180_26	phrog_190	128.2	5.2e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114180_26	UniRef90_A0A417W6H7	258.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114180_26	742767.HMPREF9456_03412	99.8	2.08e-25	N/A	N/A
Pfam	UHGV-0114180_26	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0114180_26	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0114180_27	K07455	206.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0114180_27	phrog_148	219.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114180_27	UniRef90_A0A416ZXI3	635.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0114180_27	742765.HMPREF9457_02107	347.0	0	RecT family	N/A
Pfam	UHGV-0114180_27	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0114180_27	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0114180_27	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0114180_27	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_29	phrog_674	196.8	0	N/A	unknown function
UniRef90	UHGV-0114180_29	UniRef90_UPI00156FBAC2	416.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114180_29	742765.HMPREF9457_02106	142.0	8.76e-38	N/A	N/A
Pfam	UHGV-0114180_29	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0114180_29	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_31	phrog_434	177.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114180_31	UniRef90_A0A3R6XK93	442.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0114180_31	1095750.HMPREF9970_1677	298.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0114180_31	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0114180_31	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0114180_31	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0114180_31	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_33	phrog_6058	58.0	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0114180_33	1238184.CM001792_gene70	62.8	0.00000000000234	N/A	N/A
UniRef90	UHGV-0114180_34	UniRef90_A0A173W999	101.0	1.07e-26	Helix-turn-helix domain	N/A
Pfam	UHGV-0114180_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0114180_36	phrog_3240	75.8	6.4e-22	N/A	unknown function
UniRef90	UHGV-0114180_36	UniRef90_Q4ZDA8	57.0	0.00000000325	ORF074	N/A
eggNOG-mapper	UHGV-0114180_36	320841.Q4ZC34_9CAUD	53.5	0.0000000161	N/A	N/A
KOfam	UHGV-0114180_40	K07729	47.4	0.00000000000043	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0114180_40	phrog_3	44.2	0.0000000000081	transcriptional repressor	transcription regulation
UniRef90	UHGV-0114180_40	UniRef90_A0A417W6P9	134.0	9.3e-40	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0114180_40	1256908.HMPREF0373_00646	82.8	3.49e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0114180_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0114180_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0114180_40	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0114180_41	K22300	54.2	0.0000000000000034	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0114180_41	phrog_2967	57.1	3.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0114180_41	UniRef90_A0A3R7C0Y2	260.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0114180_41	1321782.HMPREF1986_02243	112.0	3.97e-30	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0114180_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0114180_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0114180_41	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_42	phrog_20886	77.0	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0114180_42	476272.RUMHYD_02825	72.0	0.00000000000000466	N/A	N/A
PHROG	UHGV-0114180_43	phrog_7395	148.3	2.66247e-44	N/A	unknown function
UniRef90	UHGV-0114180_43	UniRef90_UPI0009F594E1	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0114180_43	886882.PPSC2_c2958	124.0	6.5e-34	N/A	N/A
Pfam	UHGV-0114180_43	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-0114180_43	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
structural_annotation	UHGV-0114180_43	PF14015,NF033634	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_44	phrog_419	78.7	9.3e-25	N/A	unknown function
UniRef90	UHGV-0114180_44	UniRef90_UPI001CBFD05B	104.0	3.59e-28	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0114180_44	203119.Cthe_2457	107.0	6.2e-30	N/A	N/A
structural_annotation	UHGV-0114180_44	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0114180_45	phrog_6988	117.3	7.8e-35	N/A	unknown function
UniRef90	UHGV-0114180_45	UniRef90_A0A352UQ75	229.0	0	Nuclease	N/A
eggNOG-mapper	UHGV-0114180_45	203119.Cthe_2456	148.0	3.36312e-44	N/A	N/A
PADLOC	UHGV-0114180_45	ThsB1_00002	51.4	0.000000000000036	TIR-like	Thoeris
Pfam	UHGV-0114180_45	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-0114180_45	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
KOfam	UHGV-0114180_46	K14059	96.7	4.4e-28	int; integrase	N/A
PHROG	UHGV-0114180_46	phrog_1	110.2	2.7e-32	integrase	integration and excision
UniRef90	UHGV-0114180_46	UniRef90_A0A417W6N2	598.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0114180_46	1235792.C808_01553	380.0	0	Phage integrase family	N/A
Pfam	UHGV-0114180_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0114180_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A