UHGV-0115670 (vOTU-014680)

Viral Genome: UHGV-0115670

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0115670
vOTU ID	vOTU-014680
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_291253
Associated Biosample	SAMEA4378287
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	90.1 (High-quality)
Trimmed?	No
CheckV Viral Markers	18
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9798
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	27.21
Jumbo Phage?	No

Genome Content
Length (bps)	31,352
GC Content	59.16%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	46
CDS Density	91%
Average CDS Length (bps)	620.54
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0115670_1	phrog_28775	166.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0115670_1	UniRef90_UPI001A9ADF00	667.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0115670_1	509191.AEDB02000075_gene2802	191.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0115670_1	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-0115670_1	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0115670_1	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_2	phrog_706	103.1	2.7e-30	N/A	unknown function
UniRef90	UHGV-0115670_2	UniRef90_D4K437	383.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0115670_2	718252.FP2_06590	383.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0115670_2	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0115670_2	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_3	phrog_4450	113.9	1.1e-33	N/A	unknown function
structural_annotation	UHGV-0115670_3	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_4	phrog_820	84.9	7.8e-25	major tail protein	tail
eggNOG-mapper	UHGV-0115670_4	718252.FP2_06610	327.0	0	N/A	N/A
structural_annotation	UHGV-0115670_4	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_5	phrog_3266	129.6	1.4e-38	tail completion	connector
eggNOG-mapper	UHGV-0115670_5	718252.FP2_06620	277.0	0	N/A	N/A
structural_annotation	UHGV-0115670_5	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_6	phrog_556	87.2	1.4e-25	minor head protein	head and packaging
UniRef90	UHGV-0115670_6	UniRef90_UPI0016528549	256.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0115670_6	718252.FP2_06630	236.0	0	Minor capsid protein	N/A
Pfam	UHGV-0115670_6	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0115670_6	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_7	phrog_3366	81.6	9.9e-24	N/A	unknown function
structural_annotation	UHGV-0115670_7	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_8	phrog_541	66.9	3e-19	head-tail adaptor	connector
PHROG	UHGV-0115670_9	phrog_267	82.3	5.1e-24	major head protein	head and packaging
UniRef90	UHGV-0115670_9	UniRef90_A0A0D8J2H9	363.0	0	p22 coat protein 5	N/A
eggNOG-mapper	UHGV-0115670_9	718252.FP2_06660	522.0	0	N/A	N/A
structural_annotation	UHGV-0115670_9	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_10	phrog_194	67.2	3.1e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0115670_10	UniRef90_D4K444	337.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0115670_10	748224.HMPREF9436_03336	244.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0115670_10	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0115670_10	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_12	phrog_581	344.9	0	minor head protein	head and packaging
UniRef90	UHGV-0115670_12	UniRef90_D4K446	971.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0115670_12	718252.FP2_06690	971.0	0	N/A	N/A
Pfam	UHGV-0115670_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0115670_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115670_12	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_13	phrog_533	272.6	0	portal protein	head and packaging
UniRef90	UHGV-0115670_13	UniRef90_A0A7G9WF85	365.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0115670_13	718252.FP2_06700	989.0	0	N/A	N/A
structural_annotation	UHGV-0115670_13	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0115670_14	K06909	83.2	4.1e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0115670_14	phrog_2	113.6	2.9e-33	terminase large subunit	head and packaging
UniRef90	UHGV-0115670_14	UniRef90_A0A844EGH8	757.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0115670_14	1449050.JNLE01000003_gene3895	402.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0115670_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0115670_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0115670_14	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_15	phrog_2412	77.0	2.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0115670_15	742738.HMPREF9460_02504	124.0	1.04e-34	N/A	N/A
PHROG	UHGV-0115670_16	phrog_36	67.1	3.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0115670_16	UniRef90_A0A6N7TNN9	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115670_16	748224.HMPREF9436_01463	86.7	6.64e-20	N/A	N/A
structural_annotation	UHGV-0115670_16	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_17	phrog_843	55.0	5.9e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115670_17	UniRef90_UPI001159D907	106.0	1.39e-25	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0115670_17	929506.CbC4_1203	104.0	1.64e-25	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
structural_annotation	UHGV-0115670_17	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_18	phrog_186	84.2	2.1e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115670_18	UniRef90_A0A291T890	348.0	0	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0115670_18	97139.C824_02821	111.0	9.94e-28	N/A	N/A
Pfam	UHGV-0115670_18	PF00392	N/A	N/A	Bacterial regulatory proteins, gntR family	GntR
structural_annotation	UHGV-0115670_18	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0115670_19	K03111	135.4	6.7e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0115670_19	phrog_44	128.3	1.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115670_19	UniRef90_UPI001D0F2FBF	335.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0115670_19	718252.FP2_06770	269.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0115670_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0115670_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0115670_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0115670_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0115670_19	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_20	phrog_561	112.0	5.7e-33	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115670_20	UniRef90_UPI0011C8A287	148.0	2.73001e-41	recombinase RecT	N/A
eggNOG-mapper	UHGV-0115670_20	33035.JPJF01000071_gene4462	147.0	1.93996e-41	N/A	N/A
structural_annotation	UHGV-0115670_20	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0115670_22	665956.HMPREF1032_03597	137.0	6.97e-31	DNA binding	N/A
COG	UHGV-0115670_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
UniRef90	UHGV-0115670_23	UniRef90_UPI001D0E65C2	188.0	0	N/A	N/A
structural_annotation	UHGV-0115670_23	PF12957	N/A	N/A	N/A	N/A
UniRef90	UHGV-0115670_25	UniRef90_A0A2A7BGV7	84.3	8.94e-20	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0115670_25	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0115670_25	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0115670_25	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0115670_27	K22300	61.9	1.4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0115670_27	phrog_4	50.1	0.000000000000067	transcriptional repressor	transcription regulation
UniRef90	UHGV-0115670_27	UniRef90_A0A564SVW9	178.0	0	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0115670_27	748224.HMPREF9436_01444	136.0	2e-39	N/A	N/A
Pfam	UHGV-0115670_27	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0115670_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0115670_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115670_29	PF16900,NF040991	N/A	N/A	N/A	N/A
KOfam	UHGV-0115670_30	K14059	147.5	1.69557e-43	int; integrase	N/A
PHROG	UHGV-0115670_30	phrog_1	139.4	3.30006e-41	integrase	integration and excision
UniRef90	UHGV-0115670_30	UniRef90_A0A564SUY5	730.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0115670_30	748224.HMPREF9436_03382	325.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0115670_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0115670_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0115670_30	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_32	phrog_1281	118.1	5.2e-35	N/A	unknown function
UniRef90	UHGV-0115670_32	UniRef90_UPI00130E304C	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115670_32	1321815.HMPREF9193_02066	125.0	9.53e-35	N/A	N/A
Pfam	UHGV-0115670_32	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0115670_32	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115670_32	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_33	phrog_5763	64.9	6.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0115670_33	742740.HMPREF9474_04284	116.0	3.07e-27	N/A	N/A
PHROG	UHGV-0115670_34	phrog_263	74.3	1.2e-21	holin	lysis
UniRef90	UHGV-0115670_34	UniRef90_A0A564SW15	151.0	0	Phage lysis protein, holin	N/A
eggNOG-mapper	UHGV-0115670_34	718252.FP2_06470	148.0	1.4013e-45	SPP1 phage holin	N/A
Pfam	UHGV-0115670_34	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0115670_34	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0115670_34	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_35	phrog_4105	81.1	1.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0115670_35	657322.FPR_27220	105.0	2.38e-28	N/A	N/A
KOfam	UHGV-0115670_37	K08640	95.3	1e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0115670_37	phrog_894	104.7	1.1e-30	endolysin	lysis
UniRef90	UHGV-0115670_37	UniRef90_A0A564SWH3	253.0	0	Peptidase M15	N/A
eggNOG-mapper	UHGV-0115670_37	718252.FP2_05470	249.0	0	Peptidase M15A	N/A
Pfam	UHGV-0115670_37	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0115670_37	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115670_37	PF05951,COG3108	N/A	N/A	N/A	N/A
KOfam	UHGV-0115670_38	K07473	74.9	1.7e-21	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-0115670_38	phrog_2737	52.9	0.0000000000000022	N/A	unknown function
UniRef90	UHGV-0115670_38	UniRef90_A0A2A7BEI9	158.0	0	Type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
eggNOG-mapper	UHGV-0115670_38	718252.FP2_06500	167.0	0	Addiction module antitoxin, RelB DinJ family	N/A
Pfam	UHGV-0115670_38	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-0115670_38	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-0115670_38	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0115670_38	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
KOfam	UHGV-0115670_39	K19158	128.6	3.2e-38	yoeB; toxin YoeB [EC:3.1.-.-]	N/A
PHROG	UHGV-0115670_39	phrog_1213	50.7	0.000000000000037	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0115670_39	UniRef90_A0A564SVN3	186.0	0	Putative mRNA interferase YoeB	N/A
eggNOG-mapper	UHGV-0115670_39	718252.FP2_06510	186.0	0	YoeB-like toxin of bacterial type II toxin-antitoxin system	N/A
Pfam	UHGV-0115670_39	PF06769	N/A	N/A	YoeB-like toxin of bacterial type II toxin-antitoxin system	YoeB_toxin
NCBIFam	UHGV-0115670_39	TIGR02116.1	N/A	N/A	Txe/YoeB family addiction module toxin	N/A
COG	UHGV-0115670_39	COG4115	N/A	N/A	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	N/A
structural_annotation	UHGV-0115670_39	PF06769,TIGR02116,COG4115	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_43	phrog_9534	240.0	0	head protein	head and packaging
eggNOG-mapper	UHGV-0115670_43	748224.HMPREF9436_03323	189.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0115670_43	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_44	phrog_538	178.7	0	minor tail protein	tail
UniRef90	UHGV-0115670_44	UniRef90_UPI0011064D4D	92.0	2.6e-17	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0115670_44	748224.HMPREF9436_03324	442.0	0	N/A	N/A
Pfam	UHGV-0115670_44	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0115670_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_45	phrog_36410	57.1	2.8e-16	N/A	unknown function
UniRef90	UHGV-0115670_45	UniRef90_UPI00130E98E0	496.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0115670_45	748224.HMPREF9436_03325	305.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0115670_45	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0115670_46	phrog_28775	620.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0115670_46	748224.HMPREF9436_03326	209.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0115670_46	COG5283	N/A	N/A	Phage-related tail protein	N/A