UHGV-0119762 (vOTU-132683)

Viral Genome: UHGV-0119762

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0119762
vOTU ID	vOTU-132683
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_297279
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	68.04 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9747
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	33.39
Jumbo Phage?	No

Genome Content
Length (bps)	24,369
GC Content	39.94%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	42
CDS Density	97%
Average CDS Length (bps)	560.14
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0119762_1	phrog_16427	77.5	2.3e-22	DNA methyltransferase	other
UniRef90	UHGV-0119762_1	UniRef90_UPI001D0850B5	167.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0119762_1	1027396.LMOSA_9370	144.0	2.41e-40	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0119762_1	oMTase_00023	42.9	0.0000000000075	orphan methyltransferase	RM
Pfam	UHGV-0119762_1	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0119762_1	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0119762_2	K00558	162.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0119762_2	phrog_116	182.7	0	DNA methyltransferase	other
UniRef90	UHGV-0119762_2	UniRef90_A0A223MJU4	627.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0119762_2	397290.C810_00394	509.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0119762_2	MTase_II_00058	137.4	4.60046e-42	Type II methyltransferase	RM
Pfam	UHGV-0119762_2	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0119762_2	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0119762_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0119762_2	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_4	phrog_3032	68.5	1.1e-19	N/A	unknown function
structural_annotation	UHGV-0119762_4	PF18358	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_5	phrog_1384	89.9	3.1e-26	Mom-like DNA modification protein	other
UniRef90	UHGV-0119762_5	UniRef90_A0A7W4VFI6	153.0	2.8026e-45	L-amino acid N-acyltransferase YncA	N/A
eggNOG-mapper	UHGV-0119762_5	411490.ANACAC_02385	211.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0119762_5	PF14236,MF_02210,NF007025,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_6	phrog_954	204.7	0	DNA methyltransferase	other
UniRef90	UHGV-0119762_6	UniRef90_A0A099I3S3	343.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0119762_6	908340.HMPREF9406_3501	285.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0119762_6	MTase_II_00074	197.1	0	Type II methyltransferase	RM
Pfam	UHGV-0119762_6	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0119762_6	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0119762_6	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_7	phrog_874	163.0	0	N/A	unknown function
UniRef90	UHGV-0119762_7	UniRef90_A0A3P6JHM7	155.0	7.70714e-44	Upf86.8	N/A
eggNOG-mapper	UHGV-0119762_7	1232449.BAHV02000016_gene1832	152.0	2.9147e-43	N/A	N/A
structural_annotation	UHGV-0119762_7	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119762_10	UniRef90_G1VXJ7	143.0	1.6199e-42	N/A	N/A
Pfam	UHGV-0119762_10	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0119762_10	PF18597	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_15	phrog_36	46.9	0.00000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-0119762_15	UniRef90_A0A6N2XDS2	95.1	2.22e-23	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-0119762_15	1321779.HMPREF1984_01313	54.3	0.000000148	N/A	N/A
Pfam	UHGV-0119762_15	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0119762_15	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-0119762_16	K07451	58.2	1.9e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0119762_16	phrog_119	81.8	9.1e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119762_16	UniRef90_A0A7I8DXT8	105.0	5.84e-27	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0119762_16	1347392.CCEZ01000060_gene3258	75.5	3.3e-16	HNH endonuclease	N/A
Pfam	UHGV-0119762_16	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0119762_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0119762_17	phrog_5110	95.0	4.2e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0119762_17	UniRef90_A0A0G3WGQ0	82.0	1.87e-17	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0119762_17	1347392.CCEZ01000060_gene3257	75.9	6.12e-16	N/A	N/A
Pfam	UHGV-0119762_17	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0119762_18	phrog_9	257.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0119762_18	UniRef90_A0A1Q6MQJ0	692.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0119762_18	1232452.BAIB02000007_gene1629	454.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0119762_18	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0119762_18	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0119762_18	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0119762_18	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_19	phrog_12	76.8	1.9e-22	portal protein	head and packaging
UniRef90	UHGV-0119762_19	UniRef90_A0A0H4TF03	230.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0119762_19	1232452.BAIB02000007_gene1627	224.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0119762_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0119762_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0119762_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0119762_20	K01358	144.8	8.00141e-43	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0119762_20	phrog_94	215.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0119762_20	UniRef90_A0A3E3EG77	258.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0119762_20	1232452.BAIB02000007_gene1626	200.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0119762_20	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0119762_20	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0119762_20	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_23	phrog_10	83.5	2.4e-24	major head protein	head and packaging
UniRef90	UHGV-0119762_23	UniRef90_A0A7G5N120	371.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0119762_23	1232452.BAIB02000007_gene1625	350.0	0	Phage capsid family	N/A
NCBIFam	UHGV-0119762_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0119762_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0119762_23	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119762_25	UniRef90_A0A7C6J040	103.0	3.41e-26	Phage head closure protein	N/A
NCBIFam	UHGV-0119762_25	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0119762_25	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119762_26	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_27	phrog_5	41.3	0.000000000032	tail completion or Neck1 protein	connector
UniRef90	UHGV-0119762_27	UniRef90_R7FK52	127.0	1.25e-35	Phage protein HK97 gp10 family	N/A
structural_annotation	UHGV-0119762_27	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_28	phrog_88	77.5	1.8e-22	major tail protein	tail
UniRef90	UHGV-0119762_28	UniRef90_A0A1Q9J4Y1	215.0	0	Phage tail protein	N/A
NCBIFam	UHGV-0119762_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0119762_28	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_30	phrog_991	291.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0119762_30	UniRef90_G9R121	674.0	0	Phage tail tape measure protein, TP901 family, core region	N/A
eggNOG-mapper	UHGV-0119762_30	665956.HMPREF1032_00108	400.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0119762_30	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0119762_30	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0119762_30	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0119762_30	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
COG	UHGV-0119762_31	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0119762_31	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_32	phrog_1067	238.0	0	minor head protein	head and packaging
UniRef90	UHGV-0119762_32	UniRef90_A0A1Q9J4Z4	342.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0119762_32	1399942.U3PFX4_9CAUD	197.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0119762_32	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0119762_32	PF00404	N/A	N/A	Dockerin type I domain	Dockerin_1
NCBIFam	UHGV-0119762_32	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0119762_32	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_36	phrog_38417	42.9	0.0000000000051	hyaluronidase	other
eggNOG-mapper	UHGV-0119762_37	908340.HMPREF9406_0812	276.0	0	N/A	N/A
structural_annotation	UHGV-0119762_38	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0119762_39	phrog_199	67.8	1.3e-19	holin	lysis
UniRef90	UHGV-0119762_39	UniRef90_N9WWD9	290.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0119762_39	999413.HMPREF1094_01994	292.0	0	N/A	N/A
Pfam	UHGV-0119762_39	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0119762_39	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0119762_39	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119762_40	UniRef90_A0A318KDR1	264.0	0	NlpC/P60 family protein	N/A
eggNOG-mapper	UHGV-0119762_40	742740.HMPREF9474_01683	116.0	6.57e-27	Glycosyl hydrolases family 25	N/A
COG	UHGV-0119762_40	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
KOfam	UHGV-0119762_41	K18843	75.9	7.5e-22	hicB; antitoxin HicB	N/A
PHROG	UHGV-0119762_41	phrog_497	86.9	3.4e-25	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0119762_41	UniRef90_G1VMP2	283.0	0	HicB-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0119762_41	908340.HMPREF9406_2561	271.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
Pfam	UHGV-0119762_41	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0119762_41	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0119762_41	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-0119762_42	K07339	64.2	1.9e-18	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0119762_42	phrog_353	88.9	2.8e-26	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0119762_42	UniRef90_D0GMY5	99.4	3.59e-26	Toxin-antitoxin system, toxin component, HicA family	N/A
eggNOG-mapper	UHGV-0119762_42	908340.HMPREF9406_2560	138.0	2.29953e-42	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0119762_42	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0119762_42	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0119762_42	PF07927,COG1724	N/A	N/A	N/A	N/A