UHGV-0122594 (vOTU-102802)

Viral Genome: UHGV-0122594

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0122594
vOTU ID	vOTU-102802
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_328513
Associated Biosample	SAMN00791929
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	52.38 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	8
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9754
Viral Hallmark Genes (geNomad)	2
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	27.34
Jumbo Phage?	No

Genome Content
Length (bps)	18,930
GC Content	51.91%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	33
CDS Density	87%
Average CDS Length (bps)	496.64
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0122594_1	K14059	244.6	0	int; integrase	N/A
PHROG	UHGV-0122594_1	phrog_1	214.2	0	integrase	integration and excision
UniRef90	UHGV-0122594_1	UniRef90_R6M673	168.0	7.00649e-45	Putative integrase-phage associated	N/A
eggNOG-mapper	UHGV-0122594_1	1235797.C816_00779	150.0	1.76e-39	Phage integrase family	N/A
Pfam	UHGV-0122594_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0122594_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0122594_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0122594_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0122594_2	K19370	44.1	0.0000000000018	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-0122594_2	phrog_10292	46.3	0.00000000000049	N/A	unknown function
UniRef90	UHGV-0122594_2	UniRef90_H1Y9J4	69.7	0.00000000000702	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0122594_2	1033810.HLPCO_001631	87.4	5.79e-20	TM2 domain	N/A
Pfam	UHGV-0122594_2	PF05154	N/A	N/A	TM2 domain	TM2
Pfam	UHGV-0122594_2	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
COG	UHGV-0122594_2	COG2314	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0122594_3	663278.Ethha_2212	50.8	0.00000645	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0122594_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0122594_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0122594_4	K22300	49.8	0.000000000000085	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0122594_4	phrog_8	57.2	4.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0122594_4	UniRef90_A0A5P3XAN6	65.9	0.0000000000139	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0122594_4	580331.Thit_1413	59.3	0.000000000927	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0122594_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0122594_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0122594_4	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0122594_5	UniRef90_A0A6N7STS2	65.5	0.00000000000303	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0122594_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0122594_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0122594_8	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_9	phrog_10993	64.0	2.2e-18	Hoc-like head decoration	head and packaging
Pfam	UHGV-0122594_9	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0122594_9	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0122594_10	K07451	40.4	0.000000000051	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0122594_10	phrog_7370	60.9	2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0122594_10	UniRef90_A0A898FSL1	132.0	3.79e-38	HNH_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0122594_10	445972.ANACOL_01826	98.6	1.51e-25	HNH nucleases	N/A
Pfam	UHGV-0122594_10	PF01844	N/A	N/A	HNH endonuclease	HNH
Pfam	UHGV-0122594_12	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
PHROG	UHGV-0122594_13	phrog_24368	46.2	0.00000000000035	N/A	unknown function
PHROG	UHGV-0122594_14	phrog_428	95.5	9.5e-28	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0122594_14	UniRef90_W7DM87	62.4	0.0000000017	Phage replication initiation protein	N/A
eggNOG-mapper	UHGV-0122594_14	642492.Clole_1831	77.0	0.0000000000000109	Helix-turn-helix domain	N/A
Pfam	UHGV-0122594_14	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0122594_14	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0122594_14	COG1846	N/A	N/A	DNA-binding transcriptional regulator, MarR family	N/A
structural_annotation	UHGV-0122594_14	PF09524,TIGR02220	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_16	phrog_3584	110.5	1.7e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0122594_16	537013.CLOSTMETH_02141	91.3	5.85e-20	N/A	N/A
structural_annotation	UHGV-0122594_16	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_17	phrog_21498	302.8	0	N/A	unknown function
UniRef90	UHGV-0122594_17	UniRef90_A0A250ETS9	226.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0122594_17	1095750.HMPREF9970_2290	228.0	0	chromosome segregation	N/A
COG	UHGV-0122594_17	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0122594_17	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_18	phrog_824	133.2	9.3e-40	N/A	unknown function
UniRef90	UHGV-0122594_18	UniRef90_A0A8E1RF49	129.0	9.16e-36	Nuclease	N/A
eggNOG-mapper	UHGV-0122594_18	411470.RUMGNA_02049	125.0	4.05e-35	VRR-NUC domain	N/A
Pfam	UHGV-0122594_18	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0122594_19	phrog_111	157.4	0	DNA methyltransferase	other
UniRef90	UHGV-0122594_19	UniRef90_A0A7C6HD44	184.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0122594_19	411468.CLOSCI_00567	175.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0122594_19	oMTase_00015	168.8	0	orphan methyltransferase	RM
Pfam	UHGV-0122594_19	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0122594_19	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0122594_19	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
COG	UHGV-0122594_20	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
PHROG	UHGV-0122594_23	phrog_924	54.7	0.0000000000000024	N/A	unknown function
UniRef90	UHGV-0122594_23	UniRef90_UPI001873F304	57.4	0.00000000138	N/A	N/A
Pfam	UHGV-0122594_23	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0122594_23	NF041588	N/A	N/A	N/A	N/A
Pfam	UHGV-0122594_24	PF20037	N/A	N/A	N/A	DUF6440
structural_annotation	UHGV-0122594_24	PF20037	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_25	phrog_3301	111.1	3.8e-33	pyrophosphatase	other
eggNOG-mapper	UHGV-0122594_25	1226322.HMPREF1545_04060	111.0	3.3e-30	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-0122594_25	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0122594_25	COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_26	phrog_36	41.7	0.00000000002	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0122594_26	PF05263,TIGR01636	N/A	N/A	N/A	N/A
Pfam	UHGV-0122594_27	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0122594_27	PF21291,TIGR02607,COG3093	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_29	phrog_16123	46.0	0.0000000000006	N/A	unknown function
eggNOG-mapper	UHGV-0122594_29	1064535.MELS_1123	70.9	0.000000000000243	N/A	N/A
PHROG	UHGV-0122594_30	phrog_144	71.5	1.5e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0122594_30	UniRef90_A0A1M5WHB2	151.0	1.26117e-44	5-methylcytosine-specific restriction enzyme A	N/A
COG	UHGV-0122594_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0122594_31	phrog_83	109.0	3.8e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0122594_31	UniRef90_UPI0003615350	122.0	2.38e-32	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0122594_31	439292.Bsel_0787	67.0	0.0000000000101	Phage terminase small Subunit	N/A
Pfam	UHGV-0122594_31	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0122594_31	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0122594_31	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
PHROG	UHGV-0122594_32	phrog_9	434.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0122594_32	UniRef90_UPI00164ABF0B	652.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0122594_32	1122919.KB905559_gene1359	624.0	0	Terminase	N/A
Pfam	UHGV-0122594_32	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0122594_32	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0122594_32	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0122594_32	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0122594_33	phrog_12	293.1	0	portal protein	head and packaging
UniRef90	UHGV-0122594_33	UniRef90_A0A1V5WBB3	489.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0122594_33	1410624.JNKK01000017_gene1975	258.0	0	Phage portal protein	N/A
Pfam	UHGV-0122594_33	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0122594_33	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0122594_33	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0122594_33	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A