UHGV-0123829 (vOTU-154710)

Viral Genome: UHGV-0123829

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0123829
vOTU ID	vOTU-154710
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_325780
Associated Biosample	SAMN00791933
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	66.57 (Medium-quality)
Trimmed?	Yes
CheckV Viral Markers	13
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9786
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	32.36
Jumbo Phage?	No

Genome Content
Length (bps)	26,508
GC Content	48.22%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	37
CDS Density	95%
Average CDS Length (bps)	677.19
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 66.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0123829_1	phrog_3584	66.3	4.9e-19	replication initiation protein	DNA, RNA and nucleotide metabolism
PHROG	UHGV-0123829_2	phrog_7566	95.2	4e-28	N/A	unknown function
UniRef90	UHGV-0123829_2	UniRef90_A0A7X5CEC2	71.6	0.0000000000000642	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0123829_2	1280698.AUJS01000007_gene1020	65.9	0.00000000000356	N/A	N/A
KOfam	UHGV-0123829_3	K03111	119.8	3.8e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0123829_3	phrog_44	119.8	2.5e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0123829_3	UniRef90_A0A350TVI6	301.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0123829_3	97138.C820_02339	155.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0123829_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0123829_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0123829_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0123829_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0123829_3	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0123829_4	K00558	170.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0123829_4	phrog_29443	219.6	0	N/A	unknown function
UniRef90	UHGV-0123829_4	UniRef90_R5AC34	681.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0123829_4	1121334.KB911073_gene1852	573.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0123829_4	MTase_II_00020	101.9	1.1e-29	Type II methyltransferase	RM
Pfam	UHGV-0123829_4	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0123829_4	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0123829_5	K00558	44.4	0.0000000000018	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0123829_5	phrog_13621	146.6	9.94922e-44	N/A	unknown function
UniRef90	UHGV-0123829_5	UniRef90_R6Q644	152.0	5.60519e-45	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0123829_5	1121334.KB911073_gene1852	176.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-0123829_5	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0123829_5	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0123829_6	phrog_424	87.0	2e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0123829_6	693746.OBV_43240	553.0	0	N/A	N/A
COG	UHGV-0123829_6	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0123829_6	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0123829_7	246199.CUS_4371	60.8	0.00000000216	N/A	N/A
structural_annotation	UHGV-0123829_7	PF11132	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_8	phrog_874	172.2	0	N/A	unknown function
UniRef90	UHGV-0123829_8	UniRef90_UPI0018F57B3A	223.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0123829_8	411468.CLOSCI_00298	193.0	0	N/A	N/A
structural_annotation	UHGV-0123829_8	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0123829_9	397290.C810_01492	52.4	0.00000463	N/A	N/A
UniRef90	UHGV-0123829_11	UniRef90_A0A1I0VIB3	74.7	0.000000000000002	MazG nucleotide pyrophosphohydrolase domain-containing protein	N/A
structural_annotation	UHGV-0123829_11	PF11998,COG5420	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_12	phrog_36	74.3	2.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0123829_12	UniRef90_A0A174B4K2	114.0	5.23e-30	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0123829_12	1235799.C818_04213	114.0	1.2e-30	sigma factor activity	N/A
Pfam	UHGV-0123829_12	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0123829_12	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0123829_12	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0123829_13	UniRef90_A0A350U007	144.0	7.00649e-44	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0123829_13	1280673.AUJJ01000020_gene1343	73.6	0.00000000000000243	Nucleotidyltransferase domain	N/A
Pfam	UHGV-0123829_13	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
COG	UHGV-0123829_13	COG1669	N/A	N/A	Predicted nucleotidyltransferase MJ0435	N/A
structural_annotation	UHGV-0123829_13	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0123829_16	K07451	42.9	0.0000000000085	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0123829_16	phrog_119	81.3	1.4e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0123829_16	UniRef90_G9YSB5	147.0	7.9874e-44	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0123829_16	926561.KB900623_gene763	99.8	1.23e-25	HNH nucleases	N/A
Pfam	UHGV-0123829_16	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0123829_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0123829_17	phrog_5110	85.1	5.4e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0123829_17	UniRef90_UPI00195E8788	84.3	9.63e-19	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0123829_17	1415774.U728_1256	55.5	0.0000000721	N/A	N/A
Pfam	UHGV-0123829_17	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0123829_17	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_18	phrog_9	227.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0123829_18	UniRef90_UPI0018737C02	853.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0123829_18	1235792.C808_00083	641.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0123829_18	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0123829_18	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0123829_18	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_19	phrog_12	110.6	9.7e-33	portal protein	head and packaging
UniRef90	UHGV-0123829_19	UniRef90_G9YSB8	443.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0123829_19	349161.Dred_2606	327.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0123829_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0123829_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0123829_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0123829_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0123829_20	K01358	139.2	4.00001e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0123829_20	phrog_94	254.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0123829_20	UniRef90_A0A1C6FFN6	357.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0123829_20	349161.Dred_2605	281.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0123829_20	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0123829_20	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0123829_20	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_21	phrog_10	138.6	7.00005e-41	major head protein	head and packaging
UniRef90	UHGV-0123829_21	UniRef90_A0A328U7P3	616.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0123829_21	1235792.C808_00086	467.0	0	Phage capsid family	N/A
Pfam	UHGV-0123829_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0123829_21	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0123829_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0123829_21	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0123829_21	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_22	phrog_749	72.6	4.5e-21	N/A	unknown function
UniRef90	UHGV-0123829_22	UniRef90_A0A7V7BBS9	77.4	1.99e-16	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0123829_22	349161.Dred_2603	82.0	6.13e-19	N/A	N/A
PHROG	UHGV-0123829_23	phrog_19734	108.8	4.1e-32	N/A	unknown function
UniRef90	UHGV-0123829_23	UniRef90_A0A6I7GNS7	124.0	2.99e-34	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0123829_23	349161.Dred_2602	91.7	2.87e-22	N/A	N/A
structural_annotation	UHGV-0123829_23	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0123829_24	999413.HMPREF1094_02005	89.0	1.23e-21	N/A	N/A
structural_annotation	UHGV-0123829_24	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_25	phrog_5	50.6	0.000000000000032	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0123829_25	908340.HMPREF9406_2573	117.0	3.58e-31	N/A	N/A
NCBIFam	UHGV-0123829_25	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0123829_25	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_26	phrog_88	112.5	3.6e-33	major tail protein	tail
UniRef90	UHGV-0123829_26	UniRef90_G9YSC5	241.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0123829_26	33035.JPJF01000039_gene278	112.0	4.11e-28	N/A	N/A
NCBIFam	UHGV-0123829_26	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0123829_26	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_28	phrog_2115	41.1	0.000000000034	tail protein	tail
eggNOG-mapper	UHGV-0123829_28	509191.AEDB02000020_gene3251	54.7	0.000000126	N/A	N/A
structural_annotation	UHGV-0123829_28	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-0123829_30	K20283	47.5	2.8e-18	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0123829_30	phrog_1533	346.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0123829_30	UniRef90_A0A417QIC1	327.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0123829_30	1235793.C809_01928	327.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0123829_30	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0123829_30	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0123829_30	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0123829_31	phrog_33	104.8	1.3e-30	distal tail protein Dit	tail
UniRef90	UHGV-0123829_31	UniRef90_R5ADI0	329.0	0	Putative phage tail component	N/A
eggNOG-mapper	UHGV-0123829_31	545697.HMPREF0216_00910	170.0	0	tail component	N/A
COG	UHGV-0123829_31	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0123829_31	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_32	phrog_3639	59.0	6.7e-17	minor tail protein	tail
UniRef90	UHGV-0123829_32	UniRef90_A0A396NMY3	408.0	0	N/A	N/A
Pfam	UHGV-0123829_32	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0123829_32	COG5434	N/A	N/A	Polygalacturonase	N/A
PHROG	UHGV-0123829_34	phrog_2310	65.5	4.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0123829_34	1391647.AVSV01000022_gene2576	57.4	0.000000000117	N/A	N/A
PHROG	UHGV-0123829_35	phrog_1067	270.2	0	minor head protein	head and packaging
UniRef90	UHGV-0123829_35	UniRef90_A0A396NSB6	707.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0123829_35	1443125.Z962_07985	226.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0123829_35	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0123829_35	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0123829_35	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0123829_35	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0123829_36	phrog_937	52.7	0.0000000000000067	hemolysin	other
eggNOG-mapper	UHGV-0123829_36	1519439.JPJG01000023_gene533	65.5	0.00000000000124	N/A	N/A