UHGV-0125485 (vOTU-042451)

Viral Genome: UHGV-0125485

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0125485
vOTU ID	vOTU-042451
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_324375
Associated Biosample	SAMN00792004
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	56.88 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9734
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.01
Jumbo Phage?	No

Genome Content
Length (bps)	39,821
GC Content	40.67%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	58
CDS Density	92%
Average CDS Length (bps)	632.59
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0125485_3	phrog_32732	87.8	1.1e-25	N/A	unknown function
UniRef90	UHGV-0125485_3	UniRef90_A0A6I0HVM8	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0125485_3	762982.HMPREF9442_01182	119.0	1.63e-31	N/A	N/A
dbAPIS	UHGV-0125485_3	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0125485_3	PF10458	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_4	phrog_9236	206.4	0	pyrophosphatase	other
eggNOG-mapper	UHGV-0125485_4	657309.BXY_08510	163.0	0	N/A	N/A
structural_annotation	UHGV-0125485_4	PF08761,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_5	phrog_8684	62.5	5.3e-19	N/A	unknown function
UniRef90	UHGV-0125485_5	UniRef90_UPI00189AAD7E	273.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0125485_5	762982.HMPREF9442_00542	59.7	0.00000000119	YopX protein	N/A
Pfam	UHGV-0125485_5	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0125485_5	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0125485_6	PF08928	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_7	phrog_355	68.1	1.4e-19	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0125485_7	UniRef90_UPI0011DCE920	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-0125485_7	762982.HMPREF9442_01214	130.0	8.82e-38	N/A	N/A
Pfam	UHGV-0125485_7	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0125485_7	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_8	phrog_1818	99.9	1.1e-29	N/A	unknown function
UniRef90	UHGV-0125485_8	UniRef90_UPI001230C7A4	142.0	3.75e-40	HAD domain-containing protein	N/A
eggNOG-mapper	UHGV-0125485_8	1458859.A0A088C4I8_9CAUD	83.6	5.3e-18	N/A	N/A
Pfam	UHGV-0125485_8	PF18143	N/A	N/A	HAD domain in Swiss Army Knife RNA repair proteins	HAD_SAK_2
structural_annotation	UHGV-0125485_8	PF18143,NF003937,COG0241	N/A	N/A	N/A	N/A
UniRef90	UHGV-0125485_9	UniRef90_A0A415IS58	87.8	1.18e-19	LacI family DNA-binding transcriptional regulator	N/A
structural_annotation	UHGV-0125485_9	PF13384,TIGR04381	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0125485_10	PF11169	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_12	phrog_373	110.3	2.1e-32	anti-repressor	transcription regulation
UniRef90	UHGV-0125485_12	UniRef90_UPI000E4A422A	478.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0125485_12	1392486.JIAF01000004_gene847	213.0	0	Phage regulatory protein	N/A
Pfam	UHGV-0125485_12	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0125485_12	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0125485_12	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0125485_12	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0125485_14	UniRef90_F3QSP6	215.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0125485_14	762982.HMPREF9442_01206	215.0	0	N/A	N/A
PHROG	UHGV-0125485_15	phrog_38431	247.1	0	N/A	unknown function
UniRef90	UHGV-0125485_15	UniRef90_R5U340	226.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0125485_15	762982.HMPREF9442_01205	222.0	0	N/A	N/A
PHROG	UHGV-0125485_16	phrog_34053	122.2	3.7e-37	N/A	unknown function
PHROG	UHGV-0125485_17	phrog_28898	299.0	0	N/A	unknown function
UniRef90	UHGV-0125485_17	UniRef90_R5UN07	172.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0125485_17	762968.HMPREF9441_00553	263.0	0	N/A	N/A
structural_annotation	UHGV-0125485_17	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_18	phrog_31654	273.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0125485_18	762968.HMPREF9441_00554	242.0	0	N/A	N/A
PHROG	UHGV-0125485_19	phrog_16490	374.5	0	N/A	unknown function
UniRef90	UHGV-0125485_19	UniRef90_A0A7M1RSH1	293.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0125485_19	762968.HMPREF9441_00555	476.0	0	N/A	N/A
UniRef90	UHGV-0125485_20	UniRef90_A0A8D9UI10	124.0	3.01e-35	Chromosomal replication initiator protein	N/A
eggNOG-mapper	UHGV-0125485_20	762982.HMPREF9442_01200	109.0	4.39e-30	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-0125485_20	PF08299,NF004688	N/A	N/A	N/A	N/A
KOfam	UHGV-0125485_23	K10804	49.1	0.000000000000082	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0125485_23	phrog_11541	70.7	3.3e-22	N/A	unknown function
UniRef90	UHGV-0125485_23	UniRef90_I9F997	498.0	0	SGNH_hydro domain-containing protein	N/A
eggNOG-mapper	UHGV-0125485_23	762984.HMPREF9445_00185	125.0	2.88e-27	Leucine-rich repeat (LRR) protein	N/A
Pfam	UHGV-0125485_23	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0125485_23	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0125485_23	PF16255,NF041897,COG2845	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0125485_25	PF14607,MF_01372,NF038393	N/A	N/A	N/A	N/A
KOfam	UHGV-0125485_26	K01448	118.9	5.9e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0125485_26	phrog_435	169.5	0	endolysin	lysis
UniRef90	UHGV-0125485_26	UniRef90_UPI0018997145	390.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0125485_26	657309.BXY_08040	323.0	0	COG NOG32858 non supervised orthologous group	N/A
Pfam	UHGV-0125485_26	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0125485_26	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0125485_26	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_28	phrog_59	93.7	1.3e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0125485_28	UniRef90_R9ZYA0	100.0	6.21e-23	HNH homing endonuclease	N/A
eggNOG-mapper	UHGV-0125485_28	1327970.R9ZYA0_9CAUD	100.0	1.04e-23	HNH endonuclease	N/A
PADLOC	UHGV-0125485_28	HEase_00016	73.1	9.3e-21	homing endonuclease	RM
Pfam	UHGV-0125485_28	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0125485_28	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-0125485_29	phrog_19698	284.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0125485_29	1235788.C802_00116	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-0125485_30	272559.BF9343_2359	119.0	1.26e-32	N/A	N/A
PHROG	UHGV-0125485_32	phrog_24896	41.7	0.0000000000012	N/A	unknown function
COG	UHGV-0125485_32	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-0125485_33	742727.HMPREF9447_04856	86.7	4.6e-21	N/A	N/A
PHROG	UHGV-0125485_34	phrog_38044	233.4	0	N/A	unknown function
UniRef90	UHGV-0125485_34	UniRef90_A0A416VT64	367.0	0	Polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-0125485_34	1121100.JCM6294_565	865.0	0	Phage minor structural protein	N/A
COG	UHGV-0125485_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0125485_34	PF14594,PF04862,PF18141,TIGR01665,NF038128,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0125485_35	742727.HMPREF9447_04845	168.0	0	N/A	N/A
structural_annotation	UHGV-0125485_35	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0125485_37	K07741	56.0	0.0000000000000016	antB; anti-repressor protein	N/A
PHROG	UHGV-0125485_37	phrog_63	141.7	6.39973e-42	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0125485_37	UniRef90_B0NM69	436.0	0	Phage regulatory protein, Rha family	N/A
eggNOG-mapper	UHGV-0125485_37	449673.BACSTE_00571	436.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0125485_37	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0125485_37	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0125485_37	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0125485_37	PF09669,PF03374,TIGR02681,COG3645,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0125485_38	742767.HMPREF9456_00918	116.0	4.79e-32	N/A	N/A
structural_annotation	UHGV-0125485_38	PF13715,NF041245	N/A	N/A	N/A	N/A
UniRef90	UHGV-0125485_39	UniRef90_A0A412NPW1	235.0	0	OMP_b-brl domain-containing protein	N/A
eggNOG-mapper	UHGV-0125485_39	880071.Fleli_0018	57.0	0.000000252	long-chain fatty acid transport protein	N/A
Pfam	UHGV-0125485_39	PF13505	N/A	N/A	Outer membrane protein beta-barrel domain	OMP_b-brl
COG	UHGV-0125485_39	COG2067	N/A	N/A	Long-chain fatty acid transport protein	N/A
structural_annotation	UHGV-0125485_39	PF13505,MF_00842,NF033755,COG3047	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0125485_40	PF02368,PF07467,NF005261	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_42	phrog_23063	97.8	6.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0125485_42	1122931.AUAE01000005_gene3485	71.2	0.00000000000000241	N/A	N/A
structural_annotation	UHGV-0125485_42	PF20482	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_43	phrog_10156	119.0	3.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0125485_43	742727.HMPREF9447_04840	148.0	3.64338e-43	N/A	N/A
PHROG	UHGV-0125485_44	phrog_9959	250.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0125485_44	UniRef90_UPI001C37A402	2314.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0125485_44	1121100.JCM6294_571	328.0	0	tape measure	N/A
Pfam	UHGV-0125485_44	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0125485_44	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0125485_44	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-0125485_46	742727.HMPREF9447_04837	143.0	9.67036e-42	N/A	N/A
eggNOG-mapper	UHGV-0125485_48	742727.HMPREF9447_04835	88.2	1.31e-20	N/A	N/A
structural_annotation	UHGV-0125485_48	PF06141	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0125485_50	1121100.JCM6294_577	132.0	1.29e-38	N/A	N/A
structural_annotation	UHGV-0125485_50	PF19586	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0125485_51	1121100.JCM6294_578	130.0	1.68e-37	N/A	N/A
structural_annotation	UHGV-0125485_51	PF20449	N/A	N/A	N/A	N/A
PHROG	UHGV-0125485_52	phrog_29	69.6	4.9e-20	major head protein	head and packaging
UniRef90	UHGV-0125485_52	UniRef90_UPI001C3778B2	800.0	0	major capsid protein	N/A
structural_annotation	UHGV-0125485_52	PF03864,MF_04133,NF041162,COG1659	N/A	N/A	N/A	N/A
UniRef90	UHGV-0125485_53	UniRef90_J9C707	128.0	1.41e-33	Protein containing Carbohydrate-binding family V/XII domain protein	N/A
structural_annotation	UHGV-0125485_53	PF21430	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0125485_54	742727.HMPREF9447_04829	126.0	1.62e-33	N/A	N/A
PHROG	UHGV-0125485_57	phrog_979	195.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0125485_57	UniRef90_UPI001C37BD15	1113.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0125485_57	742727.HMPREF9447_04827	626.0	0	Terminase-like family	N/A
Pfam	UHGV-0125485_57	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0125485_57	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0125485_57	PF04466,PF17289,MF_04145,TIGR01547,COG5323	N/A	N/A	N/A	N/A