UHGV-0128668 (vOTU-124157)

Viral Genome: UHGV-0128668

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0128668
vOTU ID	vOTU-124157
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_312401
Associated Biosample	SAMEA37081918
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	60 (Medium-quality)
Trimmed?	Yes
CheckV Viral Markers	18
CheckV Host Markers	4
Recoded?	No

Viral Content
geNomad score	0.9745
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	39.55
Jumbo Phage?	No

Genome Content
Length (bps)	22,165
GC Content	42.14%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	41
CDS Density	93%
Average CDS Length (bps)	500.56
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0128668_1	phrog_3099	86.5	3.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0128668_1	411462.DORLON_00781	138.0	1.55e-40	N/A	N/A
PHROG	UHGV-0128668_2	phrog_3266	141.1	3.89981e-42	tail completion	connector
eggNOG-mapper	UHGV-0128668_2	411461.DORFOR_00740	246.0	0	N/A	N/A
structural_annotation	UHGV-0128668_2	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_3	phrog_556	154.5	0	minor head protein	head and packaging
UniRef90	UHGV-0128668_3	UniRef90_UPI00093128B4	199.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0128668_3	411462.DORLON_00783	213.0	0	N/A	N/A
structural_annotation	UHGV-0128668_3	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_4	phrog_3366	133.1	1.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-0128668_4	742765.HMPREF9457_02129	182.0	0	N/A	N/A
Pfam	UHGV-0128668_4	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0128668_4	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_5	phrog_541	69.2	5.9e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0128668_5	1120998.AUFC01000030_gene2237	68.9	0.000000000000147	N/A	N/A
structural_annotation	UHGV-0128668_5	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_6	phrog_422	235.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0128668_6	658655.HMPREF0988_02560	479.0	0	N/A	N/A
structural_annotation	UHGV-0128668_6	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_7	phrog_194	101.7	9.3e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-0128668_7	UniRef90_A0A1C5W5U5	283.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0128668_7	742765.HMPREF9457_02126	293.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0128668_7	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0128668_7	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_8	phrog_3675	124.0	4.3e-37	N/A	unknown function
UniRef90	UHGV-0128668_8	UniRef90_UPI001C02868E	145.0	3.09687e-43	YjcQ family protein	N/A
eggNOG-mapper	UHGV-0128668_8	1235799.C818_04221	158.0	0	YjcQ protein	N/A
Pfam	UHGV-0128668_8	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0128668_8	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_10	phrog_581	327.7	0	minor head protein	head and packaging
UniRef90	UHGV-0128668_10	UniRef90_UPI001899F79D	1113.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0128668_10	411461.DORFOR_00748	722.0	0	N/A	N/A
Pfam	UHGV-0128668_10	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0128668_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0128668_10	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_11	phrog_533	325.1	0	portal protein	head and packaging
UniRef90	UHGV-0128668_11	UniRef90_A0A414QMA7	881.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0128668_11	742765.HMPREF9457_02120	806.0	0	N/A	N/A
structural_annotation	UHGV-0128668_11	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0128668_12	K06909	83.8	2.2e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0128668_12	phrog_2	93.8	3.3e-27	terminase large subunit	head and packaging
UniRef90	UHGV-0128668_12	UniRef90_A0A414U7F9	883.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0128668_12	742765.HMPREF9457_02119	813.0	0	Terminase-like family	N/A
Pfam	UHGV-0128668_12	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0128668_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0128668_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0128668_12	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_13	phrog_2412	135.5	2.5e-40	N/A	unknown function
UniRef90	UHGV-0128668_13	UniRef90_UPI001E414EFE	170.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0128668_13	742723.HMPREF9477_00912	212.0	0	N/A	N/A
PHROG	UHGV-0128668_15	phrog_36	83.1	3.8e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0128668_15	UniRef90_A0A3R5X3C8	279.0	0	N/A	N/A
eggNOG-mapper	UHGV-0128668_15	1235792.C808_03069	204.0	0	sigma factor activity	N/A
Pfam	UHGV-0128668_15	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0128668_15	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0128668_15	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0128668_17	K07741	108.3	1.6e-31	antB; anti-repressor protein	N/A
PHROG	UHGV-0128668_17	phrog_130	205.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0128668_17	UniRef90_UPI001CCE83AA	333.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0128668_17	33035.JPJF01000057_gene3118	264.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0128668_17	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0128668_17	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0128668_17	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0128668_17	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0128668_19	UniRef90_A0A3D2P1R0	105.0	1.83e-28	Phosphoribosylglycinamide formyltransferase	N/A
eggNOG-mapper	UHGV-0128668_19	588581.Cpap_1508	98.2	2.63e-26	N/A	N/A
structural_annotation	UHGV-0128668_19	PF20075,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_21	phrog_2562	181.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0128668_21	UniRef90_A0A173ZAT7	546.0	0	N/A	N/A
eggNOG-mapper	UHGV-0128668_21	1235790.C805_00030	235.0	0	N/A	N/A
Pfam	UHGV-0128668_21	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0128668_21	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0128668_21	PF14297	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_22	phrog_140	103.3	2.5e-30	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0128668_22	UniRef90_A0A173ZD06	282.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0128668_22	411461.DORFOR_00015	204.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0128668_22	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0128668_22	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0128668_22	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_23	phrog_1029	291.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0128668_23	411461.DORFOR_00016	384.0	0	N/A	N/A
structural_annotation	UHGV-0128668_23	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_24	phrog_997	153.6	0	replication terminator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0128668_24	411461.DORFOR_00017	207.0	0	N/A	N/A
KOfam	UHGV-0128668_25	K07455	199.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0128668_25	phrog_148	221.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0128668_25	UniRef90_A0A173ZB66	607.0	0	p33	N/A
eggNOG-mapper	UHGV-0128668_25	742765.HMPREF9457_02107	479.0	0	RecT family	N/A
Pfam	UHGV-0128668_25	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0128668_25	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0128668_25	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0128668_25	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_26	phrog_674	191.4	0	N/A	unknown function
UniRef90	UHGV-0128668_26	UniRef90_A0A8E3MVI4	292.0	0	N/A	N/A
eggNOG-mapper	UHGV-0128668_26	742765.HMPREF9457_02106	239.0	0	N/A	N/A
Pfam	UHGV-0128668_26	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0128668_26	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_27	phrog_434	160.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0128668_27	UniRef90_A0A173ZAF2	442.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-0128668_27	742765.HMPREF9457_02105	355.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0128668_27	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0128668_27	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0128668_27	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0128668_27	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0128668_28	PF16826	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_33	phrog_32168	82.9	1.9e-24	N/A	unknown function
structural_annotation	UHGV-0128668_35	PF12729	N/A	N/A	N/A	N/A
UniRef90	UHGV-0128668_37	UniRef90_UPI00156ED408	149.0	1.4013e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0128668_37	1232446.BAIE02000002_gene796	50.8	0.000000233	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0128668_37	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
structural_annotation	UHGV-0128668_37	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0128668_38	K22299	57.4	3.6e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0128668_38	phrog_4	49.3	0.00000000000011	transcriptional repressor	transcription regulation
UniRef90	UHGV-0128668_38	UniRef90_A0A3E3JYF3	171.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0128668_38	1235790.C805_00592	112.0	2.82e-29	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0128668_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0128668_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0128668_38	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_39	phrog_87	81.5	8.7e-24	metallo-protease	other
UniRef90	UHGV-0128668_39	UniRef90_UPI00189A815C	281.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0128668_39	411461.DORFOR_00033	202.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0128668_39	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0128668_39	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0128668_39	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_40	phrog_7395	138.8	2.20004e-41	N/A	unknown function
UniRef90	UHGV-0128668_40	UniRef90_UPI00189BBF69	284.0	0	N/A	N/A
eggNOG-mapper	UHGV-0128668_40	1168067.JAGP01000001_gene1216	118.0	5.86e-32	N/A	N/A
Pfam	UHGV-0128668_40	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-0128668_40	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
structural_annotation	UHGV-0128668_40	PF14015,NF033634	N/A	N/A	N/A	N/A
PHROG	UHGV-0128668_41	phrog_419	77.3	2.4e-24	N/A	unknown function
UniRef90	UHGV-0128668_41	UniRef90_UPI001CF863AC	113.0	9.46e-32	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0128668_41	203119.Cthe_2457	113.0	1.81e-32	N/A	N/A
Pfam	UHGV-0128668_41	PF14083	N/A	N/A	PGDYG protein	PGDYG
structural_annotation	UHGV-0128668_41	PF14083	N/A	N/A	N/A	N/A