UHGV-0134752 (vOTU-161928)

Viral Genome: UHGV-0134752

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0134752
vOTU ID	vOTU-161928
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_365008
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	65.77 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9748
Viral Hallmark Genes (geNomad)	2
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	37.18
Jumbo Phage?	No

Genome Content
Length (bps)	22,980
GC Content	40.34%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	39
CDS Density	88%
Average CDS Length (bps)	516.08
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0134752_1	86416.Clopa_0337	121.0	2.89e-31	Phage Terminase	N/A
COG	UHGV-0134752_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
PHROG	UHGV-0134752_2	phrog_5110	97.3	9.2e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0134752_2	UniRef90_A0A7C6U502	111.0	1.14e-29	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0134752_2	1235798.C817_02582	81.3	1.68e-18	N/A	N/A
Pfam	UHGV-0134752_2	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0134752_2	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_3	phrog_20533	49.7	0.000000000000051	N/A	unknown function
UniRef90	UHGV-0134752_3	UniRef90_A0A7C6U4T3	182.0	0	PLD phosphodiesterase domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_3	1123058.KB894251_gene2369	71.6	0.000000000000808	N/A	N/A
KOfam	UHGV-0134752_4	K07451	42.1	0.000000000016	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0134752_4	phrog_119	67.7	1.8e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_4	UniRef90_A0A412ULY9	220.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0134752_4	1158607.UAU_01026	102.0	7.19e-27	HNH endonuclease	N/A
Pfam	UHGV-0134752_4	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0134752_4	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0134752_5	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_6	phrog_3584	149.7	1.96182e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0134752_6	1235800.C819_00515	68.9	0.0000000000476	N/A	N/A
structural_annotation	UHGV-0134752_6	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_8	phrog_2118	121.9	5.6e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_8	UniRef90_A0A374DVG7	228.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0134752_8	610130.Closa_0730	150.0	1.4013e-45	HNH endonuclease	N/A
Pfam	UHGV-0134752_8	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0134752_8	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0134752_8	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_11	phrog_824	144.9	2.60642e-43	N/A	unknown function
UniRef90	UHGV-0134752_11	UniRef90_A0A3D3D6C6	249.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_11	397288.C806_00096	159.0	0	VRR_NUC	N/A
Pfam	UHGV-0134752_11	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0134752_11	PF08774	N/A	N/A	N/A	N/A
COG	UHGV-0134752_13	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
KOfam	UHGV-0134752_14	K03497	89.5	6.9e-26	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0134752_14	phrog_6218	111.6	1e-32	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_14	UniRef90_A0A329UQ77	72.8	0.0000000000000132	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_14	1160721.RBI_I01596	100.0	7.35e-24	ParB-like nuclease domain	N/A
Pfam	UHGV-0134752_14	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0134752_14	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0134752_16	phrog_6058	42.4	0.0000000000079	N/A	unknown function
structural_annotation	UHGV-0134752_16	NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_17	phrog_98	84.3	1.4e-24	N/A	unknown function
UniRef90	UHGV-0134752_17	UniRef90_A0A374DV44	165.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_17	563031.HMPREF0666_01127	81.6	4.62e-18	YopX protein	N/A
Pfam	UHGV-0134752_17	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0134752_17	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0134752_17	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0134752_19	K06919	103.0	2.9e-30	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0134752_19	phrog_1829	835.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_19	UniRef90_A0A2N0ULU7	1565.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_19	1410670.JHXF01000015_gene2274	878.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0134752_19	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0134752_19	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0134752_19	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0134752_19	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0134752_19	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0134752_19	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_20	phrog_378	113.8	1.7e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_20	UniRef90_A0A374ND86	366.0	0	N/A	N/A
eggNOG-mapper	UHGV-0134752_20	1410670.JHXF01000015_gene2272	157.0	0	N/A	N/A
AcrCatalog	UHGV-0134752_20	cluster_1061	73.6	1.63e-18	NA	N/A
Pfam	UHGV-0134752_20	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0134752_20	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_21	phrog_5702	75.9	1.9e-22	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_21	UniRef90_A0A374N329	211.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_21	1410670.JHXF01000015_gene2271	153.0	0	VRR_NUC	N/A
Pfam	UHGV-0134752_21	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0134752_21	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0134752_22	K19789	325.1	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0134752_22	phrog_16	281.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_22	UniRef90_A0A374N1T8	912.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0134752_22	1410670.JHXF01000015_gene2270	561.0	0	helicase	N/A
PADLOC	UHGV-0134752_22	mREase_IV_00005	112.3	1.9e-34	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0134752_22	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0134752_22	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0134752_22	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0134752_22	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_23	phrog_2872	251.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_23	UniRef90_UPI001A9B3ECC	528.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0134752_23	754027.HMPREF9554_00709	224.0	0	N/A	N/A
Pfam	UHGV-0134752_23	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0134752_23	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_24	phrog_253	99.1	1.8e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0134752_24	UniRef90_UPI0019171ADA	179.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0134752_24	1027396.LMOSA_21290	58.5	0.0000000309	Siphovirus Gp157	N/A
Pfam	UHGV-0134752_24	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0134752_24	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_25	phrog_15609	95.6	5.7e-28	N/A	unknown function
UniRef90	UHGV-0134752_25	UniRef90_A0A373SLQ6	159.0	8.89825e-43	N/A	N/A
eggNOG-mapper	UHGV-0134752_25	641112.ACOK01000073_gene2872	117.0	2.9e-28	N/A	N/A
structural_annotation	UHGV-0134752_25	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0134752_26	phrog_424	87.3	1.7e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0134752_26	693746.OBV_43240	552.0	0	N/A	N/A
COG	UHGV-0134752_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0134752_26	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134752_28	UniRef90_A0A2N0ULT9	137.0	4.22001e-41	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-0134752_28	1283300.ATXB01000001_gene1737	46.2	0.00000684	DNA excision	N/A
Pfam	UHGV-0134752_28	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0134752_28	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0134752_28	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-0134752_28	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0134752_31	K15773	45.9	0.0000000000012	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-0134752_31	phrog_3	41.9	0.000000000041	transcriptional repressor	transcription regulation
UniRef90	UHGV-0134752_31	UniRef90_A0A374N3U7	126.0	7.39e-37	XRE family transcriptional regulator	N/A
Pfam	UHGV-0134752_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0134752_31	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0134752_31	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0134752_32	UniRef90_A0A2N0ULS1	157.0	0	YozE_SAM_like domain-containing protein	N/A
Pfam	UHGV-0134752_32	PF06855	N/A	N/A	YozE SAM-like fold	YozE_SAM_like
UniRef90	UHGV-0134752_36	UniRef90_A0A1M7SN53	75.1	1.81e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0134752_36	1121335.Clst_0370	71.6	7.14e-16	N/A	N/A
Pfam	UHGV-0134752_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0134752_36	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0134752_37	K01356	107.9	1.5e-31	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0134752_37	phrog_4	137.5	1.2e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-0134752_37	UniRef90_UPI0015F84BF4	330.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0134752_37	246199.CUS_5911	134.0	2.81e-36	N/A	N/A
Pfam	UHGV-0134752_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0134752_37	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0134752_37	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0134752_37	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0134752_38	K21463	42.0	0.0000000000017	tcaA; membrane-associated protein TcaA	N/A
UniRef90	UHGV-0134752_38	UniRef90_A0A412DWX4	611.0	0	Tetratricopeptide repeat protein	N/A
Pfam	UHGV-0134752_38	PF13428	N/A	N/A	Tetratricopeptide repeat	TPR_14
KOfam	UHGV-0134752_39	K14059	207.8	0	int; integrase	N/A
PHROG	UHGV-0134752_39	phrog_1	182.8	0	integrase	integration and excision
UniRef90	UHGV-0134752_39	UniRef90_A0A2N0ULT2	794.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0134752_39	428125.CLOLEP_02743	314.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0134752_39	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0134752_39	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0134752_39	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A