UHGV-0135660 (vOTU-045984)

Viral Genome: UHGV-0135660

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0135660
vOTU ID	vOTU-045984
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_363314
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9801
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	21.49
Jumbo Phage?	No

Genome Content
Length (bps)	42,833
GC Content	58.78%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	93%
Average CDS Length (bps)	750.57
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0135660_1	K16628	123.5	7.5e-37	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0135660_1	phrog_819	115.9	0	tail protein	tail
eggNOG-mapper	UHGV-0135660_1	1232443.BAIA02000078_gene14	83.2	0.00000000000000673	nuclear chromosome segregation	N/A
Pfam	UHGV-0135660_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0135660_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0135660_2	PF01835,NF005176,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_3	phrog_22978	328.9	0	N/A	unknown function
UniRef90	UHGV-0135660_3	UniRef90_A0A3D4D8G0	668.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0135660_3	1519439.JPJG01000060_gene1905	842.0	0	N/A	N/A
Pfam	UHGV-0135660_3	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UniRef90	UHGV-0135660_4	UniRef90_R5DCX9	184.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0135660_4	1410650.JHWL01000003_gene2815	135.0	8.22e-33	N/A	N/A
PHROG	UHGV-0135660_5	phrog_12105	122.5	2.3e-36	N/A	unknown function
eggNOG-mapper	UHGV-0135660_5	1519439.JPJG01000060_gene1891	70.1	0.0000000000000989	N/A	N/A
PHROG	UHGV-0135660_7	phrog_1357	217.5	0	major head protein	head and packaging
UniRef90	UHGV-0135660_7	UniRef90_A0A2V2CFL5	398.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0135660_7	1410650.JHWL01000003_gene2830	275.0	0	N/A	N/A
Pfam	UHGV-0135660_7	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0135660_7	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0135660_7	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_8	phrog_13908	149.6	1.96182e-44	N/A	unknown function
eggNOG-mapper	UHGV-0135660_8	1410650.JHWL01000003_gene2831	105.0	7.11e-24	N/A	N/A
PHROG	UHGV-0135660_9	phrog_156	298.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0135660_9	1410650.JHWL01000003_gene2833	538.0	0	N/A	N/A
structural_annotation	UHGV-0135660_9	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_13	phrog_511	232.8	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0135660_13	1410650.JHWL01000003_gene2827	319.0	0	N/A	N/A
structural_annotation	UHGV-0135660_13	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0135660_14	K06909	146.6	2.39622e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0135660_14	phrog_979	134.6	4.39994e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0135660_14	UniRef90_A0A810Q5R0	644.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0135660_14	1410650.JHWL01000003_gene2834	639.0	0	N/A	N/A
Pfam	UHGV-0135660_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0135660_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0135660_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_15	phrog_606	67.9	1.7e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0135660_15	UniRef90_UPI001F487344	123.0	3.18e-33	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0135660_15	397290.C810_05185	125.0	1.13e-34	DNA-packaging protein gp3	N/A
Pfam	UHGV-0135660_15	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0135660_15	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_16	phrog_3584	111.3	8.4e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0135660_16	537013.CLOSTMETH_02141	73.9	0.000000000000253	N/A	N/A
structural_annotation	UHGV-0135660_16	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_17	phrog_2245	84.7	1.1e-24	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0135660_17	UniRef90_A0A844JSD9	62.8	0.00000000068	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0135660_17	706433.HMPREF9430_01279	60.1	0.00000000142	N/A	N/A
structural_annotation	UHGV-0135660_17	PF08271	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0135660_19	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_21	phrog_190	96.3	3.5e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0135660_21	UniRef90_UPI0006C2AC63	131.0	2.83e-36	N/A	N/A
eggNOG-mapper	UHGV-0135660_21	1226322.HMPREF1545_00295	117.0	2.02e-31	N/A	N/A
Pfam	UHGV-0135660_21	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0135660_21	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_25	phrog_38832	63.5	5.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0135660_25	665956.HMPREF1032_03087	73.9	0.0000000000000233	N/A	N/A
PHROG	UHGV-0135660_26	phrog_3136	138.6	1.99993e-41	N/A	unknown function
UniRef90	UHGV-0135660_26	UniRef90_A0A3D0HBD2	115.0	6.29e-30	ASCH domain-containing protein	N/A
Pfam	UHGV-0135660_26	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0135660_26	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0135660_26	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0135660_27	UniRef90_UPI000E2F27AF	54.3	0.000000579	N/A	N/A
Pfam	UHGV-0135660_27	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0135660_27	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_28	phrog_15609	225.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0135660_28	1501230.ET33_21155	119.0	2.6e-28	N/A	N/A
Pfam	UHGV-0135660_28	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0135660_28	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0135660_28	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_29	phrog_8470	257.4	0	N/A	unknown function
UniRef90	UHGV-0135660_29	UniRef90_UPI0002D9F0BD	306.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0135660_29	1007096.BAGW01000031_gene117	306.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0135660_29	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0135660_29	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_30	phrog_36399	51.4	0.000000000000021	N/A	unknown function
structural_annotation	UHGV-0135660_33	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0135660_36	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-0135660_39	K18830	41.2	0.000000000039	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-0135660_39	UniRef90_A0A3R5Z350	79.3	8.61e-17	XRE family transcriptional regulator	N/A
Pfam	UHGV-0135660_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0135660_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0135660_39	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0135660_40	471855.Shel_04260	65.9	0.00000000587	dextransucrase activity	N/A
COG	UHGV-0135660_40	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
Pfam	UHGV-0135660_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0135660_42	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0135660_43	K14059	208.2	0	int; integrase	N/A
PHROG	UHGV-0135660_43	phrog_1	198.6	0	integrase	integration and excision
UniRef90	UHGV-0135660_43	UniRef90_A0A212JT52	254.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-0135660_43	1507.HMPREF0262_00307	200.0	0	Phage integrase family	N/A
Pfam	UHGV-0135660_43	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0135660_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0135660_43	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0135660_43	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0135660_44	UniRef90_A0A7M1RTM1	74.7	0.000000000000123	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0135660_44	1378168.N510_03079	69.7	0.00000000000395	N/A	N/A
structural_annotation	UHGV-0135660_45	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_46	phrog_16490	61.7	1.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0135660_46	641112.ACOK01000103_gene525	55.5	0.000000835	N/A	N/A
UniRef90	UHGV-0135660_48	UniRef90_UPI00164EA432	219.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0135660_48	525254.HMPREF0072_1273	203.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0135660_48	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0135660_48	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0135660_49	phrog_13256	59.5	3.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0135660_49	1519439.JPJG01000023_gene535	64.7	0.000000000000469	N/A	N/A
PHROG	UHGV-0135660_51	phrog_937	62.9	6.4e-18	hemolysin	other
eggNOG-mapper	UHGV-0135660_51	1519439.JPJG01000023_gene533	79.7	3.1e-18	N/A	N/A
PHROG	UHGV-0135660_52	phrog_37900	40.7	0.00000000002	N/A	unknown function
UniRef90	UHGV-0135660_52	UniRef90_R5IRZ6	351.0	0	N/A	N/A
eggNOG-mapper	UHGV-0135660_52	1519439.JPJG01000060_gene1894	234.0	0	N/A	N/A
Pfam	UHGV-0135660_52	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0135660_52	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0135660_52	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
KOfam	UHGV-0135660_53	K24214	44.4	0.0000000000013	OTOL1; otolin-1	N/A
PHROG	UHGV-0135660_53	phrog_6320	43.7	0.0000000000031	tail fiber protein	tail
eggNOG-mapper	UHGV-0135660_53	1519439.JPJG01000060_gene1892	58.5	0.000000718	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0135660_53	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0135660_53	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A