UHGV-0147923 (vOTU-098884)

Viral Genome: UHGV-0147923

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0147923
vOTU ID	vOTU-098884
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_396005
Associated Biosample	SAMN04480489
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	89.14 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	22
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9652
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	55.99
Jumbo Phage?	No

Genome Content
Length (bps)	32,334
GC Content	34.55%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	50
CDS Density	94%
Average CDS Length (bps)	606.96
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0147923_1	K03496	154.7	1.4013e-45	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0147923_1	phrog_164	146.8	1.59748e-43	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0147923_1	UniRef90_A0A059MZ90	409.0	0	CobQ/CobB/MinD/ParA nucleotide binding domain protein	N/A
eggNOG-mapper	UHGV-0147923_1	226185.EF_2387	409.0	0	Anion-transporting ATPase	N/A
Pfam	UHGV-0147923_1	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0147923_1	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0147923_1	PF01656,MF_00355,NF041283,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_2	phrog_6264	68.9	9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0147923_2	226185.EF_2386	140.0	1.54003e-41	N/A	N/A
PHROG	UHGV-0147923_3	phrog_7540	58.4	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0147923_3	226185.EF_2385	224.0	0	N/A	N/A
KOfam	UHGV-0147923_4	K14059	149.1	4.76441e-44	int; integrase	N/A
PHROG	UHGV-0147923_4	phrog_1	166.8	0	integrase	integration and excision
UniRef90	UHGV-0147923_4	UniRef90_A0A199YTB7	735.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0147923_4	1139219.I569_00871	287.0	0	Phage integrase family	N/A
Pfam	UHGV-0147923_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0147923_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0147923_4	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_5	phrog_5170	46.9	0.00000000000041	N/A	unknown function
UniRef90	UHGV-0147923_5	UniRef90_A0A0M2ZSK8	166.0	0	Protein TolA, tolA	N/A
eggNOG-mapper	UHGV-0147923_5	911104.AEKT01000035_gene2018	74.3	0.00000000000353	DNA/RNA non-specific endonuclease	N/A
COG	UHGV-0147923_5	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
PHROG	UHGV-0147923_6	phrog_87	76.2	1.4e-22	metallo-protease	other
UniRef90	UHGV-0147923_6	UniRef90_H5T0J5	319.0	0	Prophage pi3 protein 58	N/A
eggNOG-mapper	UHGV-0147923_6	272623.L53979	315.0	0	N/A	N/A
PHROG	UHGV-0147923_7	phrog_2967	48.1	0.00000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0147923_7	UniRef90_A0A5D4GAS4	315.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0147923_7	272623.L53427	228.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0147923_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0147923_7	PF06543	N/A	N/A	Lactococcus bacteriophage repressor	Lac_bphage_repr
COG	UHGV-0147923_7	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-0147923_8	UniRef90_Q9CFN8	144.0	1.26117e-43	Prophage pi3 protein 56, cro-like repressor	N/A
eggNOG-mapper	UHGV-0147923_8	272623.L53055	144.0	2.10195e-44	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0147923_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0147923_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0147923_8	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0147923_9	K07741	94.1	4.1e-27	antB; anti-repressor protein	N/A
PHROG	UHGV-0147923_9	phrog_373	132.8	3.2e-39	anti-repressor	transcription regulation
UniRef90	UHGV-0147923_9	UniRef90_A0A5D4GCQ7	397.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0147923_9	1229517.AMFD01000025_gene925	142.0	5.06e-40	ORF6C domain	N/A
Pfam	UHGV-0147923_9	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0147923_9	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0147923_9	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0147923_9	PF10552,PF08346,NF008573,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0147923_10	UniRef90_A0A0V8BS10	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-0147923_10	1158610.UC3_02384	56.6	0.00000000116	N/A	N/A
UniRef90	UHGV-0147923_11	UniRef90_A0A0V8AYY5	108.0	5.62e-30	N/A	N/A
KOfam	UHGV-0147923_13	K03111	161.4	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0147923_13	phrog_44	177.7	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0147923_13	UniRef90_A0A0V8BSD1	269.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0147923_13	416870.llmg_2474	218.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0147923_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0147923_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0147923_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0147923_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0147923_13	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0147923_14	K02086	104.9	4.4e-31	dnaD; DNA replication protein	N/A
PHROG	UHGV-0147923_14	phrog_186	128.0	9.2e-38	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0147923_14	UniRef90_A0A199YT70	469.0	0	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0147923_14	416870.llmg_1502	145.0	9.66001e-40	Replication initiation and membrane attachment	N/A
Pfam	UHGV-0147923_14	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0147923_14	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0147923_14	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0147923_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-0147923_15	UniRef90_A0A1V0P118	239.0	0	N/A	N/A
PHROG	UHGV-0147923_18	phrog_25265	174.6	0	N/A	unknown function
UniRef90	UHGV-0147923_18	UniRef90_A0A0V8BYP8	357.0	0	Prophage Lp2 protein 22	N/A
eggNOG-mapper	UHGV-0147923_18	220668.lp_0645	195.0	0	N/A	N/A
PHROG	UHGV-0147923_19	phrog_37550	170.1	0	N/A	unknown function
PHROG	UHGV-0147923_20	phrog_33099	137.7	1.70006e-41	N/A	unknown function
PHROG	UHGV-0147923_22	phrog_2670	65.7	6.8e-19	N/A	unknown function
UniRef90	UHGV-0147923_22	UniRef90_UPI00071D0CBA	201.0	0	N/A	N/A
Pfam	UHGV-0147923_22	PF07874	N/A	N/A	N/A	DUF1660
UniRef90	UHGV-0147923_23	UniRef90_A0A1V0P442	110.0	4.37e-30	N/A	N/A
KOfam	UHGV-0147923_24	K01160	40.2	0.000000000088	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0147923_24	phrog_140	71.7	1.4e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0147923_24	UniRef90_UPI001A9226DD	258.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0147923_24	114416.Q9MC30_9CAUD	127.0	7.18e-36	magnesium ion binding	N/A
Pfam	UHGV-0147923_24	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0147923_24	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0147923_26	UniRef90_T2F770	91.3	2.22e-21	Phage-related protein	N/A
UniRef90	UHGV-0147923_27	UniRef90_D2BK63	116.0	1.05e-31	N/A	N/A
PHROG	UHGV-0147923_28	phrog_30014	118.6	2.7e-35	N/A	unknown function
PHROG	UHGV-0147923_29	phrog_2343	70.2	3.8e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0147923_29	UniRef90_UPI001BCB66FD	265.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0147923_29	1231377.C426_0906	83.2	3.87e-18	N/A	N/A
PHROG	UHGV-0147923_30	phrog_9	312.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0147923_30	UniRef90_A0A199YSL2	1152.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0147923_30	423476.A3F641_9CAUD	781.0	0	Phage Terminase	N/A
Pfam	UHGV-0147923_30	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0147923_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0147923_30	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_31	phrog_12	87.3	8.4e-26	portal protein	head and packaging
UniRef90	UHGV-0147923_31	UniRef90_A0A0V8BRQ4	731.0	0	Portal protein phage associated	N/A
eggNOG-mapper	UHGV-0147923_31	1231377.C426_0904	394.0	0	portal protein	N/A
Pfam	UHGV-0147923_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0147923_31	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0147923_31	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0147923_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0147923_32	K01358	145.8	3.9937e-43	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0147923_32	phrog_94	228.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0147923_32	UniRef90_A0A0V8BRK4	480.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0147923_32	1231377.C426_0903	308.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0147923_32	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0147923_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0147923_32	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_33	phrog_10	122.8	3.7e-36	major head protein	head and packaging
UniRef90	UHGV-0147923_33	UniRef90_A0A199YSQ9	733.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0147923_33	1231377.C426_0902	538.0	0	Phage capsid family	N/A
Pfam	UHGV-0147923_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0147923_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0147923_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0147923_33	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_34	phrog_749	84.9	5.9e-25	N/A	unknown function
UniRef90	UHGV-0147923_34	UniRef90_A0A1V0P102	98.2	1.51e-24	N/A	N/A
eggNOG-mapper	UHGV-0147923_34	1145276.T479_12235	60.8	0.000000000109	N/A	N/A
UniRef90	UHGV-0147923_35	UniRef90_A0A0V8BV11	250.0	0	N/A	N/A
eggNOG-mapper	UHGV-0147923_35	888049.HMPREF8578_0262	111.0	5.27e-30	N/A	N/A
structural_annotation	UHGV-0147923_35	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_36	phrog_5	54.2	0.0000000000000042	tail completion or Neck1 protein	connector
UniRef90	UHGV-0147923_36	UniRef90_K2PN92	103.0	5.43e-26	Putative phage protein	N/A
eggNOG-mapper	UHGV-0147923_36	1423816.BACQ01000026_gene939	72.8	0.0000000000000167	N/A	N/A
structural_annotation	UHGV-0147923_36	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_37	phrog_78	84.0	1.8e-24	tail terminator	connector
UniRef90	UHGV-0147923_37	UniRef90_A0A0V8EA63	133.0	1e-37	N/A	N/A
eggNOG-mapper	UHGV-0147923_37	1035189.HMPREF9954_1931	137.0	6.6e-40	N/A	N/A
structural_annotation	UHGV-0147923_37	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_38	phrog_88	102.2	5.4e-30	major tail protein	tail
UniRef90	UHGV-0147923_38	UniRef90_A0A0V8BRR7	372.0	0	Phage major tail protein	N/A
eggNOG-mapper	UHGV-0147923_38	1231377.C426_0897	175.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0147923_38	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0147923_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0147923_38	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_39	phrog_34916	44.8	0.0000000000022	tail fiber protein	tail
UniRef90	UHGV-0147923_39	UniRef90_UPI001C015137	56.2	0.0000000155	phosphoenolpyruvate synthase	N/A
eggNOG-mapper	UHGV-0147923_39	585506.HMPREF0877_0863	50.8	0.000000403	Collagen triple helix repeat (20 copies)	N/A
PHROG	UHGV-0147923_40	phrog_187	52.3	0.000000000000011	head-tail adaptor	connector
UniRef90	UHGV-0147923_40	UniRef90_A0A0A7T228	98.6	9.16e-25	N/A	N/A
structural_annotation	UHGV-0147923_40	PF06894,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_41	phrog_1293	1226.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0147923_41	UniRef90_A0A199YTN7	2003.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0147923_41	1231377.C426_0893	754.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0147923_41	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0147923_41	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0147923_41	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0147923_41	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_43	phrog_33	71.1	2.6e-20	distal tail protein Dit	tail
UniRef90	UHGV-0147923_43	UniRef90_A0A7T4NJL5	409.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0147923_43	1260356.D920_00307	184.0	0	Phage tail protein	N/A
Pfam	UHGV-0147923_43	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0147923_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0147923_43	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_44	phrog_538	244.6	0	minor tail protein	tail
UniRef90	UHGV-0147923_44	UniRef90_UPI00109BFB8E	735.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0147923_44	12390.Q77MU2_9CAUD	259.0	0	N/A	N/A
Pfam	UHGV-0147923_44	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0147923_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_45	phrog_1220	195.8	0	head protein	head and packaging
UniRef90	UHGV-0147923_45	UniRef90_A0A4Q7DQQ2	411.0	0	BppU_IgG domain-containing protein	N/A
eggNOG-mapper	UHGV-0147923_45	388452.A6MAD2_9CAUD	190.0	0	N/A	N/A
Pfam	UHGV-0147923_45	PF18667	N/A	N/A	Baseplate upper protein immunoglobulin like domain	BppU_IgG
structural_annotation	UHGV-0147923_45	PF18667,PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_47	phrog_1893	187.2	0	N/A	unknown function
UniRef90	UHGV-0147923_47	UniRef90_T2F7N5	184.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0147923_47	416870.llmg_2084	182.0	0	N/A	N/A
PHROG	UHGV-0147923_48	phrog_881	95.2	3.2e-28	holin	lysis
UniRef90	UHGV-0147923_48	UniRef90_UPI001179E634	131.0	6.66e-39	holin	N/A
eggNOG-mapper	UHGV-0147923_48	1229517.AMFD01000023_gene1299	88.6	1.42e-22	Putative phage holin Dp-1	N/A
Pfam	UHGV-0147923_48	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0147923_48	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0147923_49	phrog_13973	128.8	1.6e-38	N/A	unknown function
UniRef90	UHGV-0147923_49	UniRef90_A0A0V8CZD2	188.0	0	N/A	N/A
KOfam	UHGV-0147923_50	K01447	53.2	0.0000000000000062	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0147923_50	phrog_670	180.7	0	endolysin	lysis
UniRef90	UHGV-0147923_50	UniRef90_A0A0V8CYU1	528.0	0	Phage N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0147923_50	641487.C3U2S5_9CAUD	285.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0147923_50	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
structural_annotation	UHGV-0147923_50	PF01510,COG5632	N/A	N/A	N/A	N/A